Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p046488 Quercus lobata HOM05D007419 ORTHO05D009327 3.5e-80 301.6 155 100.0
QL09p046563 Quercus lobata HOM05D007419 ORTHO05D009327 3.5e-80 301.6 155 100.0
QL09p047694 Quercus lobata HOM05D007419 ORTHO05D009327 3.5e-72 275.0 155 92.3
Cfa003423 Carpinus fangiana HOM05D007419 ORTHO05D009327 3.0e-63 245.4 158 81.6
QL09p047847 Quercus lobata HOM05D007419 ORTHO05D009327 1.1e-62 243.4 136 91.9
Haze_25509 Corylus avellana HOM05D007419 ORTHO05D009327 7.3e-62 240.7 158 79.7
Prupe.7G248700 Prunus persica HOM05D007419 ORTHO05D009327 1.3e-50 203.4 160 68.8
Thecc.09G132300 Theobroma cacao HOM05D007419 ORTHO05D009327 1.9e-49 199.5 158 68.4
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 7.1e-49 197.6 158 64.6
Duzib168G0167 Durio zibethinus HOM05D007419 ORTHO05D009327 7.1e-49 197.6 158 69.0
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 1.6e-48 196.4 158 62.0
COL.COLO4_35160 Corchorus olitorius HOM05D007419 ORTHO05D009327 3.5e-48 195.3 158 65.2
FAN28G1883 Fragaria x ananassa HOM05D007419 ORTHO05D009327 4.6e-48 194.9 158 65.8
FvH4_1g02590 Fragaria vesca HOM05D007419 ORTHO05D009327 6.0e-48 194.5 158 65.8
GSVIVG01015591001 Vitis vinifera HOM05D007419 ORTHO05D009327 6.0e-48 194.5 158 63.9
FAN19G0754 Fragaria x ananassa HOM05D007419 ORTHO05D009327 3.0e-47 192.2 158 65.2
RcHm_v2.0_Chr2g0087621 Rosa chinensis HOM05D007419 ORTHO05D009327 8.7e-47 190.7 158 66.5
Actinidia21952 Actinidia chinensis HOM05D007419 ORTHO05D009327 1.1e-46 190.3 160 62.5
FAN26G2390 Fragaria x ananassa HOM05D007419 ORTHO05D009327 5.6e-46 188.0 158 67.1
MD15G1166600 Malus domestica HOM05D007419 ORTHO05D009327 9.6e-46 187.2 159 62.9
Gorai.013G235200 Gossypium raimondii HOM05D007419 ORTHO05D009327 1.3e-45 186.8 154 66.2
Potri.018G126300 Populus trichocarpa HOM05D007419 ORTHO05D009327 1.3e-45 186.8 155 65.2
MD15G1167400 Malus domestica HOM05D007419 ORTHO05D009327 3.6e-45 185.3 159 62.3
Manes.06G047100 Manihot esculenta HOM05D007419 ORTHO05D009327 8.1e-45 184.1 158 62.0
Lj7A626G73 Lonicera japonica HOM05D007419 ORTHO05D009327 1.1e-44 183.7 155 62.6
DCAR_014901 Daucus carota HOM05D007419 ORTHO05D009327 5.3e-44 181.4 166 56.6
Psat4g039120 Pisum sativum HOM05D007419 ORTHO05D009327 1.2e-43 180.3 154 59.1
Ca_06942_v3 Cicer arietinum L. HOM05D007419 ORTHO05D009327 2.6e-43 179.1 154 58.4
Solyc07g007920.3 Solanum lycopersicum HOM05D007419 ORTHO05D009327 3.4e-43 178.7 155 58.1
TPR.G24826 Trifolium pratense HOM05D007419 ORTHO05D009327 4.4e-43 178.3 154 58.4
arahy.Tifrunner.gnm1.ann1.XRJX6H Arachis hypogaea HOM05D007419 ORTHO05D009327 7.6e-43 177.6 163 57.7
Sabra18G0107200 Salix brachista HOM05D007419 ORTHO05D009327 9.9e-43 177.2 155 61.3
PGSC0003DMG400030908 Solanum tuberosum HOM05D007419 ORTHO05D009327 1.3e-42 176.8 155 58.7
Glyma.17G111300 Glycine max HOM05D007419 ORTHO05D009327 1.7e-42 176.4 155 58.1
Medtr4g115340 Medicago truncatula HOM05D007419 ORTHO05D009327 1.7e-42 176.4 155 57.4
Sopen07g003800 Solanum pennellii HOM05D007419 ORTHO05D009327 3.8e-42 175.3 155 57.4
Peaxi162Scf00088g01333 Petunia axillaris HOM05D007419 ORTHO05D009327 4.9e-42 174.9 155 60.0
SalBow1G7934 Salvia bowleyana HOM05D007419 ORTHO05D009327 4.9e-42 174.9 155 59.4
SGA_v2.0_scaffold109G31074 Striga asiatica HOM05D007419 ORTHO05D009327 4.9e-42 174.9 155 58.7
Migut.K00424 Erythranthe guttata HOM05D007419 ORTHO05D009327 1.1e-41 173.7 155 58.7
Phvul.003G168900 Phaseolus vulgaris HOM05D007419 ORTHO05D009327 1.1e-41 173.7 155 54.8
Lj4g0016099 Lotus japonicus HOM05D007419 ORTHO05D009327 2.4e-41 172.6 155 56.1
Nitab4.5_0002008g0040 Nicotiana tabacum HOM05D007419 ORTHO05D009327 2.4e-41 172.6 155 57.4
CANSAT11G1590 Cannabis sativa HOM05D007419 ORTHO05D009327 1.2e-40 170.2 156 57.7
Lsat_1_v5_gn_5_91781 Lactuca sativa HOM05D007419 ORTHO05D009327 1.2e-40 170.2 156 56.4
AUR62011176 Chenopodium quinoa HOM05D007419 ORTHO05D009327 2.7e-40 169.1 160 58.8
Lalb_Chr13g0301571 Lupinus albus HOM05D007419 ORTHO05D009327 3.5e-40 168.7 158 53.8
Rhsim01G0061500 Rhododendron simsii HOM05D007419 ORTHO05D009327 4.6e-40 168.3 197 50.8
ECA234G0484 Erigeron canadensis HOM05D007419 ORTHO05D009327 1.0e-39 167.2 155 54.8
Sc08g0006270 Simmondsia chinensis HOM05D007419 ORTHO05D009327 1.7e-39 166.4 158 55.7
Sed0020697 Sechium edule HOM05D007419 ORTHO05D009327 5.1e-39 164.9 158 58.2
HanXRQChr12g0356641 Helianthus annuus HOM05D007419 ORTHO05D009327 6.6e-39 164.5 162 52.5
AUR62013308 Chenopodium quinoa HOM05D007419 ORTHO05D009327 8.7e-39 164.1 160 56.9
Cc06_g08060 Coffea canephora HOM05D007419 ORTHO05D009327 8.7e-39 164.1 168 54.8
EL10Ac8g18720 Beta vulgaris HOM05D007419 ORTHO05D009327 1.1e-38 163.7 154 58.4
Nitab4.5_0003393g0060 Nicotiana tabacum HOM05D007419 ORTHO05D009327 2.8e-37 159.1 155 53.5
CsaV3_1G026730 Cucumis sativus L. HOM05D007419 ORTHO05D009327 3.6e-37 158.7 158 55.7
Ah.09g224820 Amaranthus hybridus HOM05D007419 ORTHO05D009327 1.4e-36 156.8 160 55.6
VMungo1215G0197 Vigna mungo HOM05D007419 ORTHO05D009327 1.4e-36 156.8 155 53.5
TWI34G0413 Tripterygium wilfordii HOM05D007419 ORTHO05D009327 2.4e-36 156.0 238 42.0
ClCG06G011500 Citrullus lanatus HOM05D007419 ORTHO05D009327 4.5e-35 151.8 189 48.7
MELO3C029461.2 Cucumis melo HOM05D007419 ORTHO05D009327 4.5e-35 151.8 158 52.5
Hund26535 Selenicereus undatus HOM05D007419 ORTHO05D009327 5.8e-35 151.4 152 55.9
arahy.Tifrunner.gnm1.ann1.SLI0XQ Arachis hypogaea HOM05D007419 ORTHO05D009327 7.6e-35 151.0 158 51.9
Eucgr.C01385 Eucalyptus grandis HOM05D007419 ORTHO05D009327 2.4e-33 146.0 167 47.9
Glyma.13G160200 Glycine max HOM05D007419 ORTHO05D009327 2.7e-32 142.5 138 53.6
SEGI_05905 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 1.0e-31 140.6 135 53.3
Os06g0173000 Oryza sativa ssp. japonica HOM05D007419 ORTHO05D009327 2.4e-28 129.4 147 43.5
QL09p047989 Quercus lobata HOM05D007419 ORTHO05D009327 1.3e-26 123.6 67 88.1
FAN23G1807 Fragaria x ananassa HOM05D007419 ORTHO05D009327 1.7e-26 123.2 158 48.7
MD08G1122800 Malus domestica HOM05D007419 ORTHO05D009327 2.3e-23 112.8 79 67.1
Aqoxy7G03635 Aquilegia oxysepala HOM05D007419 ORTHO05D009327 1.9e-22 109.8 79 65.8
Nn8g39545 Nelumbo nucifera HOM05D007419 ORTHO05D009327 5.8e-19 98.2 90 61.1
CAN.G778.5 Capsicum annuum HOM05D007419 ORTHO05D009327 3.2e-17 92.4 66 62.1
SEGI_33879 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 1.3e-15 87.0 65 60.0
ATR0800G079 Amborella trichopoda HOM05D007419 ORTHO05D009327 1.5e-14 83.6 75 54.7
Gohir.A13G200700 Gossypium hirsutum HOM05D007419 ORTHO05D009327 1.5e-11 73.6 48 72.9
Oeu038257.1 Olea europaea HOM05D007419 ORTHO05D009327 2.2e-10 69.7 154 33.8
vmacro07721 Vaccinium macrocarpon HOM05D007419 ORTHO05D009327 3.8e-10 68.9 47 63.8
SMO340G0190 Selaginella moellendorffii HOM05D007419 ORTHO05D009327 5.0e-10 68.6 93 36.6
SEGI_04675 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 2.1e-08 63.2 143 29.4


User provided reference genes

Program Settings