Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p045850 Quercus lobata HOM05D006940 ORTHO05D008626 1.0e-57 226.5 111 100.0
Thecc.01G212400 Theobroma cacao HOM05D006940 ORTHO05D008626 1.5e-37 159.5 112 73.2
Dinv28817 Davidia involucrata HOM05D006940 ORTHO05D008626 2.6e-37 158.7 114 70.2
CiPaw.13G054100 Carya illinoinensis HOM05D006940 ORTHO05D008626 3.4e-37 158.3 111 70.3
Gohir.A07G159700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 7.6e-37 157.1 110 71.8
Gorai.N003800 Gossypium raimondii HOM05D006940 ORTHO05D008626 2.9e-36 155.2 110 70.9
Gohir.D07G166700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 4.9e-36 154.5 110 70.0
CiPaw.14G043100 Carya illinoinensis HOM05D006940 ORTHO05D008626 5.4e-35 151.0 112 67.9
TAR365G0827 Trochodendron aralioides HOM05D006940 ORTHO05D008626 5.4e-35 151.0 105 68.6
Duzib138G0498 Durio zibethinus HOM05D006940 ORTHO05D008626 2.7e-34 148.7 112 67.9
Medtr7g052120 Medicago truncatula HOM05D006940 ORTHO05D008626 1.0e-33 146.7 112 67.9
Haze_03308 Corylus avellana HOM05D006940 ORTHO05D008626 3.9e-33 144.8 87 73.6
Duzib133G0939 Durio zibethinus HOM05D006940 ORTHO05D008626 5.1e-33 144.4 111 68.5
Potri.002G249901 Populus trichocarpa HOM05D006940 ORTHO05D008626 5.1e-33 144.4 111 66.7
Duzib211G0506 Durio zibethinus HOM05D006940 ORTHO05D008626 6.7e-33 144.1 111 64.9
Manes.12G052500 Manihot esculenta HOM05D006940 ORTHO05D008626 8.7e-33 143.7 112 67.0
CSS0001884 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 1.1e-32 143.3 112 65.2
Gorai.007G158800 Gossypium raimondii HOM05D006940 ORTHO05D008626 3.3e-32 141.7 112 66.1
Phvul.008G137700 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 3.3e-32 141.7 111 64.9
Ciclev10033128m.g Citrus clementina HOM05D006940 ORTHO05D008626 5.6e-32 141.0 115 66.1
Gohir.D11G148100 Gossypium hirsutum HOM05D006940 ORTHO05D008626 7.4e-32 140.6 112 65.2
Gohir.A11G141800 Gossypium hirsutum HOM05D006940 ORTHO05D008626 9.6e-32 140.2 112 65.2
Glyma.18G152800 Glycine max HOM05D006940 ORTHO05D008626 1.3e-31 139.8 111 64.0
TPR.G26809 Trifolium pratense HOM05D006940 ORTHO05D008626 1.6e-31 139.4 111 63.1
Gorai.001G228900 Gossypium raimondii HOM05D006940 ORTHO05D008626 2.8e-31 138.7 111 66.7
Glyma.08G345100 Glycine max HOM05D006940 ORTHO05D008626 3.7e-31 138.3 112 63.4
Lj1g0019270 Lotus japonicus HOM05D006940 ORTHO05D008626 3.7e-31 138.3 111 63.1
Gohir.D07G203400 Gossypium hirsutum HOM05D006940 ORTHO05D008626 4.8e-31 137.9 111 65.8
Rhsim13G0052100 Rhododendron simsii HOM05D006940 ORTHO05D008626 4.8e-31 137.9 111 62.2
Eucgr.K02098 Eucalyptus grandis HOM05D006940 ORTHO05D008626 6.2e-31 137.5 111 63.1
TWI36G1176 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 1.1e-30 136.7 112 60.7
Psat0s1437g0080 Pisum sativum HOM05D006940 ORTHO05D008626 1.4e-30 136.3 112 63.4
Prupe.8G192000 Prunus persica HOM05D006940 ORTHO05D008626 1.8e-30 136.0 104 67.3
Lalb_Chr21g0315011 Lupinus albus HOM05D006940 ORTHO05D008626 2.4e-30 135.6 111 62.2
Gohir.A07G197033 Gossypium hirsutum HOM05D006940 ORTHO05D008626 3.1e-30 135.2 114 64.9
CSS0043498 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 4.0e-30 134.8 111 61.3
RcHm_v2.0_Chr6g0283181 Rosa chinensis HOM05D006940 ORTHO05D008626 6.9e-30 134.0 111 64.9
FvH4_2g17950 Fragaria vesca HOM05D006940 ORTHO05D008626 3.4e-29 131.7 104 66.3
FAN15G1530 Fragaria x ananassa HOM05D006940 ORTHO05D008626 3.4e-29 131.7 104 66.3
FAN24G1170 Fragaria x ananassa HOM05D006940 ORTHO05D008626 4.5e-29 131.3 104 66.3
Lalb_Chr03g0041181 Lupinus albus HOM05D006940 ORTHO05D008626 9.9e-29 130.2 111 59.5
Atru.chr6.1604 Acer truncatum HOM05D006940 ORTHO05D008626 2.2e-28 129.0 117 60.7
MD10G1153200 Malus domestica HOM05D006940 ORTHO05D008626 2.2e-28 129.0 103 66.0
Nn1g08072 Nelumbo nucifera HOM05D006940 ORTHO05D008626 2.2e-28 129.0 108 58.3
FAN27G2163 Fragaria x ananassa HOM05D006940 ORTHO05D008626 2.9e-28 128.6 104 65.4
MD05G1163400 Malus domestica HOM05D006940 ORTHO05D008626 2.9e-28 128.6 114 62.3
Solyc08g066610.3 Solanum lycopersicum HOM05D006940 ORTHO05D008626 4.9e-28 127.9 107 58.9
PGR044G1150 Punica granatum HOM05D006940 ORTHO05D008626 8.4e-28 127.1 116 60.3
Sabra02G0190300 Salix brachista HOM05D006940 ORTHO05D008626 1.1e-27 126.7 89 68.5
Nn7g37664 Nelumbo nucifera HOM05D006940 ORTHO05D008626 1.4e-27 126.3 91 62.6
TWI75G1309 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 1.4e-27 126.3 112 55.4
TAR636G0441 Trochodendron aralioides HOM05D006940 ORTHO05D008626 2.4e-27 125.6 83 69.9
arahy.Tifrunner.gnm1.ann1.ZA5GY6 Arachis hypogaea HOM05D006940 ORTHO05D008626 4.2e-27 124.8 114 62.3
Sopen08g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 4.2e-27 124.8 107 57.9
Sopen09g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 1.2e-26 123.2 105 57.1
Cpa.g.sc8.85 Carica papaya HOM05D006940 ORTHO05D008626 2.1e-26 122.5 89 65.2
COL.COLO4_06154 Corchorus olitorius HOM05D006940 ORTHO05D008626 2.1e-26 122.5 82 73.2
Nitab4.5_0000038g0040 Nicotiana tabacum HOM05D006940 ORTHO05D008626 3.5e-26 121.7 112 58.9
Psat0s4060g0200 Pisum sativum HOM05D006940 ORTHO05D008626 3.5e-26 121.7 107 57.9
MELO3C021111.2 Cucumis melo HOM05D006940 ORTHO05D008626 1.0e-25 120.2 102 58.8
PSO017G0530 Papaver somniferum HOM05D006940 ORTHO05D008626 1.3e-25 119.8 108 58.3
TPR.G2024 Trifolium pratense HOM05D006940 ORTHO05D008626 1.8e-25 119.4 75 72.0
PSO675G0779 Papaver somniferum HOM05D006940 ORTHO05D008626 2.3e-25 119.0 108 58.3
Nitab4.5_0003186g0010 Nicotiana tabacum HOM05D006940 ORTHO05D008626 3.0e-25 118.6 111 57.7
Hma1.2p1_0781F.1_g216880 Hydrangea macrophylla HOM05D006940 ORTHO05D008626 3.9e-25 118.2 52 94.2
VMungo0331G0069 Vigna mungo HOM05D006940 ORTHO05D008626 3.9e-25 118.2 107 55.1
vmacro02811 Vaccinium macrocarpon HOM05D006940 ORTHO05D008626 6.7e-25 117.5 66 77.3
Manes.13G053500 Manihot esculenta HOM05D006940 ORTHO05D008626 8.7e-25 117.1 66 78.8
arahy.Tifrunner.gnm1.ann1.7YS827 Arachis hypogaea HOM05D006940 ORTHO05D008626 1.1e-24 116.7 110 61.8
Carub.0007s2980 Capsella rubella HOM05D006940 ORTHO05D008626 1.1e-24 116.7 113 54.0
CsaV3_7G026610 Cucumis sativus L. HOM05D006940 ORTHO05D008626 1.1e-24 116.7 101 59.4
MSTRG.20995 Avicennia marina HOM05D006940 ORTHO05D008626 1.5e-24 116.3 111 52.3
EL10Ac5g11605 Beta vulgaris HOM05D006940 ORTHO05D008626 2.5e-24 115.5 107 49.5
THA.LOC104818992 Tarenaya hassleriana HOM05D006940 ORTHO05D008626 3.3e-24 115.2 111 55.0
Migut.D02467 Erythranthe guttata HOM05D006940 ORTHO05D008626 4.3e-24 114.8 114 53.5
Phvul.010G031000 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 4.3e-24 114.8 107 52.3
MSTRG.18810 Avicennia marina HOM05D006940 ORTHO05D008626 5.6e-24 114.4 111 54.1
Sed0027137 Sechium edule HOM05D006940 ORTHO05D008626 5.6e-24 114.4 52 90.4
AL9U11560 Arabidopsis lyrata HOM05D006940 ORTHO05D008626 7.4e-24 114.0 113 53.1
DCAR_012690 Daucus carota HOM05D000328 ORTHO05D008626 9.6e-24 113.6 65 75.4
Sed0013755 Sechium edule HOM05D006940 ORTHO05D008626 1.3e-23 113.2 88 60.2
Thhalv10026516m.g Eutrema salsugineum HOM05D006940 ORTHO05D008626 1.6e-23 112.8 51 90.2
MBI07_g41210_MAGBIO Magnolia biondii HOM05D006940 ORTHO05D008626 1.6e-23 112.8 113 48.7
Oeu064661.1 Olea europaea HOM05D006940 ORTHO05D008626 1.6e-23 112.8 103 59.2
PGSC0003DMG400007740 Solanum tuberosum HOM05D006940 ORTHO05D008626 1.6e-23 112.8 107 55.1
AT4G12970 Arabidopsis thaliana HOM05D006940 ORTHO05D008626 2.1e-23 112.5 113 54.0
HanXRQChr08g0231211 Helianthus annuus HOM05D006940 ORTHO05D008626 3.7e-23 111.7 101 54.5
CARHR218280 Cardamine hirsuta HOM05D006940 ORTHO05D008626 1.4e-22 109.8 113 50.4
SalBow7G1139 Salvia bowleyana HOM05D006940 ORTHO05D008626 1.4e-22 109.8 51 86.3
CANSAT01G0416 Cannabis sativa HOM05D006940 ORTHO05D008626 3.1e-22 108.6 79 62.0
CANSAT01G0831 Cannabis sativa HOM05D006940 ORTHO05D008626 3.1e-22 108.6 79 62.0
CANSAT01G1056 Cannabis sativa HOM05D006940 ORTHO05D008626 3.1e-22 108.6 79 62.0
C08p08940 Brassica napus HOM05D006940 ORTHO05D008626 4.0e-22 108.2 113 50.4
BolC8t47738H Brassica oleracea HOM05D006940 ORTHO05D008626 4.0e-22 108.2 113 50.4
BcaB04g17733 Brassica carinata HOM05D006940 ORTHO05D008626 5.3e-22 107.8 113 51.3
A08p07220 Brassica napus HOM05D006940 ORTHO05D008626 6.9e-22 107.5 113 50.4
BraA08t32735Z Brassica rapa HOM05D006940 ORTHO05D008626 6.9e-22 107.5 113 50.4
Lsat_1_v5_gn_9_16040 Lactuca sativa HOM05D006940 ORTHO05D008626 6.9e-22 107.5 89 61.8
Os01g0914400 Oryza sativa ssp. japonica HOM05D006940 ORTHO05D008626 1.2e-21 106.7 76 59.2
Sp7g09835 Schrenkiella parvula HOM05D006940 ORTHO05D008626 1.2e-21 106.7 113 52.2
Aa31sc38G90 Aethionema arabicum HOM05D006940 ORTHO05D008626 1.5e-21 106.3 113 51.3
SalBow6G3514 Salvia bowleyana HOM05D006940 ORTHO05D008626 4.5e-21 104.8 106 51.9
AUR62042875 Chenopodium quinoa HOM05D006940 ORTHO05D008626 2.9e-20 102.1 106 50.0
Zm00001eb143570 Zea mays HOM05D006940 ORTHO05D008626 2.9e-20 102.1 76 57.9
Lsat_1_v5_gn_8_97920 Lactuca sativa HOM05D006940 ORTHO05D008626 3.8e-20 101.7 100 53.0
GSVIVG01031691001 Vitis vinifera HOM05D006940 ORTHO05D008626 4.9e-20 101.3 46 82.6
HanXRQChr16g0507861 Helianthus annuus HOM05D006940 ORTHO05D008626 1.1e-19 100.1 112 49.1
Sc01g0005680 Simmondsia chinensis HOM05D006940 ORTHO05D008626 1.1e-19 100.1 100 54.0
Zm00001eb364920 Zea mays HOM05D006940 ORTHO05D008626 3.2e-19 98.6 108 47.2
PGSC0003DMG400020111 Solanum tuberosum HOM05D006940 ORTHO05D008626 4.2e-19 98.2 113 49.6
HPP92_011792 Vanilla planifolia HOM05D006940 ORTHO05D008626 7.1e-19 97.4 114 42.1
MSTRG.12756 Avicennia marina HOM05D006940 ORTHO05D008626 9.3e-19 97.1 111 51.4
ATR0609G114 Amborella trichopoda HOM05D006940 ORTHO05D008626 4.6e-18 94.7 114 48.2
SEGI_36325 Sequoiadendron giganteum HOM05D006940 ORTHO05D008626 6.7e-17 90.9 103 48.5
Zm00001eb174960 Zea mays HOM05D006940 ORTHO05D008626 2.2e-15 85.9 49 65.3
SMO351G0191 Selaginella moellendorffii HOM05D006940 ORTHO05D008626 4.1e-14 81.6 51 64.7


User provided reference genes

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