Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p044651 Quercus lobata HOM05D014996 ORTHO05D016254 1.6e-186 656.0 333 100.0
QL12p023424 Quercus lobata HOM05D002663 ORTHO05D002988 2.9e-39 166.8 289 35.3
QL08p061842 Quercus lobata HOM05D000003 ORTHO05D000004 4.9e-39 166.0 465 25.6
QL02p058259 Quercus lobata HOM05D000155 ORTHO05D000022 1.3e-34 151.4 245 35.5
QL93p0100_0664 Quercus lobata HOM05D000155 ORTHO05D000022 1.3e-34 151.4 245 35.5
QL12p025692 Quercus lobata HOM05D014996 ORTHO05D000022 1.3e-31 141.4 256 34.8
QL01p013568 Quercus lobata HOM05D000155 ORTHO05D000022 3.6e-26 123.2 98 60.2
QL07p009746 Quercus lobata HOM05D016036 ORTHO05D016254 6.9e-25 119.0 156 44.2
COL.COLO4_01156 Corchorus olitorius HOM05D000003 ORTHO05D000004 7.9e-21 105.5 274 26.3
QL01p007248 Quercus lobata HOM05D000003 ORTHO05D000022 1.8e-20 104.4 422 21.3
QL07p038410 Quercus lobata HOM05D014996 ORTHO05D000022 1.5e-19 101.3 70 65.7
QL05p015875 Quercus lobata HOM05D000003 ORTHO05D000004 7.4e-19 99.0 249 25.3
QL04p025475 Quercus lobata HOM05D000003 ORTHO05D000004 6.2e-18 95.9 226 28.3
QL11p021917 Quercus lobata HOM05D014996 ORTHO05D000022 6.2e-18 95.9 76 64.5
QL08p041434 Quercus lobata HOM05D000419 ORTHO05D001071 1.2e-16 91.7 74 56.8
QL09p042447 Quercus lobata HOM05D016036 ORTHO05D016254 2.0e-16 90.9 146 30.1
QL09p035941 Quercus lobata HOM05D016036 ORTHO05D016254 3.4e-16 90.1 283 24.0
QL11p034921 Quercus lobata HOM05D016036 ORTHO05D016254 1.0e-15 88.6 146 30.1
QL10p048631 Quercus lobata HOM05D027877 ORTHO05D000022 4.9e-15 86.3 101 40.6
QL05p027737 Quercus lobata HOM05D025667 ORTHO05D012243 6.5e-15 85.9 171 31.6
AUR62039453 Chenopodium quinoa HOM05D000003 ORTHO05D000004 3.2e-14 83.6 166 27.1
QL10p004071 Quercus lobata HOM05D001287 ORTHO05D001226 7.1e-14 82.4 88 43.2
AUR62033970 Chenopodium quinoa HOM05D000003 ORTHO05D000004 4.6e-13 79.7 339 22.4
QL02p017925 Quercus lobata HOM05D000003 ORTHO05D000022 1.3e-12 78.2 95 38.9
QL01p016530 Quercus lobata HOM05D000003 ORTHO05D000022 1.9e-11 74.3 95 37.9
QL01p022100 Quercus lobata HOM05D000003 ORTHO05D000004 4.3e-11 73.2 147 27.2
QL05p085433 Quercus lobata HOM05D014996 ORTHO05D000022 5.7e-11 72.8 58 51.7
QL08p045436 Quercus lobata HOM05D016036 ORTHO05D016254 7.4e-11 72.4 118 31.4
COL.COLO4_19293 Corchorus olitorius HOM05D000155 ORTHO05D000022 9.6e-11 72.0 260 21.2
QL04p002496 Quercus lobata HOM05D014996 ORTHO05D000022 9.6e-11 72.0 88 37.5
QL10p064615 Quercus lobata HOM05D000155 ORTHO05D000022 9.6e-11 72.0 88 37.5
QL02p026451 Quercus lobata HOM05D014996 ORTHO05D000022 2.8e-10 70.5 70 50.0
Atru.chr1.2428 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-09 68.6 323 22.6
COL.COLO4_33843 Corchorus olitorius HOM05D000003 ORTHO05D000004 1.1e-09 68.6 170 28.8
QL09p018494 Quercus lobata HOM05D000003 ORTHO05D000022 1.8e-09 67.8 115 34.8
QL03p021186 Quercus lobata HOM05D000003 ORTHO05D016254 2.4e-09 67.4 162 27.2
QL04p047149 Quercus lobata HOM05D000003 ORTHO05D000022 2.4e-09 67.4 91 39.6
QL04p092065 Quercus lobata HOM05D000005 ORTHO05D000007 3.1e-09 67.0 88 39.8
QL07p034964 Quercus lobata HOM05D000053 ORTHO05D000448 3.1e-09 67.0 87 36.8
QL03p010769 Quercus lobata HOM05D000155 ORTHO05D000022 5.3e-09 66.2 88 39.8
QL09p016348 Quercus lobata HOM05D000155 ORTHO05D000022 5.3e-09 66.2 94 36.2
Sabra09G0061300 Salix brachista HOM05D000003 ORTHO05D000022 9.0e-09 65.5 360 23.1
Thecc.04G017600 Theobroma cacao HOM05D000285 ORTHO05D000241 1.5e-08 64.7 82 40.2
QL05p019689 Quercus lobata HOM05D014996 ORTHO05D000022 5.8e-08 62.8 81 39.5
PGR004G2666 Punica granatum HOM05D034178 ORTHO05D016254 7.6e-08 62.4 75 29.3
QL06p022672 Quercus lobata HOM05D014996 ORTHO05D000022 1.0e-07 62.0 59 47.5
COL.COLO4_20501 Corchorus olitorius HOM05D000003 ORTHO05D000004 2.9e-07 60.5 227 22.0
QL02p092030 Quercus lobata HOM05D000003 ORTHO05D000022 3.8e-07 60.1 226 20.8
COL.COLO4_35381 Corchorus olitorius HOM05D016036 ORTHO05D016254 6.5e-07 59.3 108 31.5
QL01p008808 Quercus lobata HOM05D027877 ORTHO05D000022 6.5e-07 59.3 77 41.6
QL10p038260 Quercus lobata HOM05D041066 ORTHO05D000022 6.5e-07 59.3 76 39.5
QL04p023183 Quercus lobata HOM05D000155 ORTHO05D000022 8.4e-07 58.9 40 67.5
QL05p002397 Quercus lobata HOM05D000155 ORTHO05D000022 1.1e-06 58.5 54 53.7
QL02p025978 Quercus lobata HOM05D000003 ORTHO05D000022 1.4e-06 58.2 90 34.4
COL.COLO4_36959 Corchorus olitorius HOM05D000003 ORTHO05D000004 1.9e-06 57.8 120 30.8
Duzib187G0609 Durio zibethinus HOM05D000003 ORTHO05D000004 1.9e-06 57.8 86 31.4
QL01p018278 Quercus lobata HOM05D000003 ORTHO05D000022 2.5e-06 57.4 99 30.3
QL07p011071 Quercus lobata HOM05D000151 ORTHO05D000074 3.2e-06 57.0 130 30.0
Lj2C63T5 Lonicera japonica HOM05D016027 ORTHO05D000022 4.2e-06 56.6 93 36.6
QL12p008788 Quercus lobata HOM05D014996 ORTHO05D000022 4.2e-06 56.6 59 44.1
Nitab4.5_0007586g0060 Nicotiana tabacum HOM05D009389 ORTHO05D012243 5.5e-06 56.2 169 25.4
QL02p058898 Quercus lobata HOM05D001486 ORTHO05D338158 5.5e-06 56.2 65 40.0
QL03p053803 Quercus lobata HOM05D027877 ORTHO05D000022 9.3e-06 55.5 91 35.2


User provided reference genes

Program Settings