Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p044539 Quercus lobata HOM05D000320 ORTHO05D338225 7.6e-125 450.7 255 100.0
QL09p044573 Quercus lobata HOM05D000320 ORTHO05D000532 3.5e-61 239.2 122 98.4
Cfa002546 Carpinus fangiana HOM05D000320 ORTHO05D000532 3.1e-41 172.9 120 71.7
Haze_24770 Corylus avellana HOM05D000320 ORTHO05D000532 4.0e-41 172.6 120 72.5
CiPaw.04G107100 Carya illinoinensis HOM05D000320 ORTHO05D000532 1.7e-23 114.0 121 52.1
TAR365G0258 Trochodendron aralioides HOM05D000320 ORTHO05D000532 7.4e-19 98.6 123 51.2
COL.COLO4_04686 Corchorus olitorius HOM05D000320 ORTHO05D000532 4.0e-17 92.8 128 46.9
Dinv04673 Davidia involucrata HOM05D000320 ORTHO05D000532 2.0e-16 90.5 154 40.3
Atru.chr5.1870 Acer truncatum HOM05D000320 ORTHO05D000532 4.5e-16 89.4 119 46.2
Duzib138G0264 Durio zibethinus HOM05D000320 ORTHO05D000532 4.5e-16 89.4 119 47.9
Ciclev10018522m.g Citrus clementina HOM05D000320 ORTHO05D000532 6.5e-15 85.5 117 47.0
MD05G1179200 Malus domestica HOM05D000320 ORTHO05D000532 8.4e-15 85.1 118 43.2
MD10G1168800 Malus domestica HOM05D000320 ORTHO05D000532 1.9e-14 84.0 104 46.2
Dinv19223 Davidia involucrata HOM05D000320 ORTHO05D000532 2.1e-13 80.5 152 36.8
RcHm_v2.0_Chr6g0285191 Rosa chinensis HOM05D000320 ORTHO05D000532 6.0e-13 79.0 108 44.4
Duzib133G0780 Durio zibethinus HOM05D000320 ORTHO05D000532 1.3e-12 77.8 115 45.2
Prupe.8G206500 Prunus persica HOM05D000320 ORTHO05D000532 8.7e-12 75.1 104 42.3
FvH4_2g19501 Fragaria vesca HOM05D000320 ORTHO05D000532 3.3e-11 73.2 108 42.6
FAN15G1734 Fragaria x ananassa HOM05D000879 ORTHO05D002043 3.3e-11 73.2 108 42.6
FAN15G3488 Fragaria x ananassa HOM05D000320 ORTHO05D000532 3.3e-11 73.2 108 42.6
Nn3g19899 Nelumbo nucifera HOM05D000320 ORTHO05D000532 3.3e-11 73.2 124 39.5
Gohir.A08G193900 Gossypium hirsutum HOM05D000320 ORTHO05D000532 1.6e-10 70.9 117 42.7
Gohir.D08G211700 Gossypium hirsutum HOM05D000320 ORTHO05D000532 2.1e-10 70.5 117 42.7
Gorai.004G225000 Gossypium raimondii HOM05D000320 ORTHO05D000532 2.1e-10 70.5 117 42.7
Actinidia30093 Actinidia chinensis HOM05D000320 ORTHO05D000532 2.4e-09 67.0 132 34.1
CAN.G119.3 Capsicum annuum HOM05D000320 ORTHO05D000532 3.1e-09 66.6 118 36.4
TAR636G2746 Trochodendron aralioides HOM05D000320 ORTHO05D000532 3.1e-09 66.6 111 43.2
CANSAT01G0348 Cannabis sativa HOM05D000320 ORTHO05D000532 2.6e-08 63.5 102 36.3
Nitab4.5_0001056g0060 Nicotiana tabacum HOM05D000320 ORTHO05D000532 3.4e-08 63.2 118 33.9
Manes.12G042400 Manihot esculenta HOM05D000320 ORTHO05D000532 4.5e-08 62.8 114 37.7
CSS0012645 Camellia sinensis var. sinensis HOM05D000320 ORTHO05D000532 1.9e-06 57.4 117 36.8
CSS0016887 Camellia sinensis var. sinensis HOM05D000320 ORTHO05D000532 1.9e-06 57.4 117 36.8
Nitab4.5_0000846g0040 Nicotiana tabacum HOM05D000320 ORTHO05D000532 7.2e-06 55.5 118 32.2


User provided reference genes

Program Settings