Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p044412 Quercus lobata HOM05D007485 ORTHO05D009437 8.7e-85 317.0 168 100.0
Haze_24766 Corylus avellana HOM05D007485 ORTHO05D009437 9.7e-44 180.6 133 72.2
Cfa002536 Carpinus fangiana HOM05D001836 ORTHO05D001519 2.4e-42 176.0 134 70.1
CiPaw.03G152400 Carya illinoinensis HOM05D007485 ORTHO05D009437 2.9e-40 169.1 134 70.1
QL09p045086 Quercus lobata HOM05D007485 ORTHO05D009437 5.0e-40 168.3 87 100.0
MD05G1180900 Malus domestica HOM05D007485 ORTHO05D009437 2.1e-38 162.9 133 63.2
MD10G1169600 Malus domestica HOM05D007485 ORTHO05D009437 8.0e-38 161.0 133 62.4
Thecc.01G230100 Theobroma cacao HOM05D007485 ORTHO05D009437 5.2e-37 158.3 134 66.4
TWI59G0176 Tripterygium wilfordii HOM05D007485 ORTHO05D009437 6.7e-37 157.9 150 60.7
Atru.chr5.1880 Acer truncatum HOM05D007485 ORTHO05D009437 8.8e-37 157.5 133 65.4
Prupe.8G207500 Prunus persica HOM05D007485 ORTHO05D009437 2.0e-36 156.4 150 57.3
CSS0034782 Camellia sinensis var. sinensis HOM05D007485 ORTHO05D009437 1.7e-35 153.3 133 64.7
Gohir.A07G201700 Gossypium hirsutum HOM05D007485 ORTHO05D009437 5.3e-34 148.3 134 66.4
Gohir.D07G208000 Gossypium hirsutum HOM05D007485 ORTHO05D009437 7.0e-34 147.9 134 66.4
COL.COLO4_36853 Corchorus olitorius HOM05D007485 ORTHO05D009437 3.5e-33 145.6 135 64.4
Duzib133G1001 Durio zibethinus HOM05D007485 ORTHO05D009437 1.1e-31 140.6 134 62.7
VMungo1383G3371 Vigna mungo HOM05D007485 ORTHO05D009437 3.2e-31 139.0 136 55.9
RcHm_v2.0_Chr6g0285341 Rosa chinensis HOM05D007485 ORTHO05D009437 5.5e-31 138.3 134 58.2
Glyma.18G175800 Glycine max HOM05D007485 ORTHO05D009437 1.2e-30 137.1 136 57.4
FAN24G1628 Fragaria x ananassa HOM05D007485 ORTHO05D009437 1.6e-30 136.7 133 57.9
Actinidia37576 Actinidia chinensis HOM05D007485 ORTHO05D009437 2.1e-30 136.3 133 57.9
FvH4_2g19580 Fragaria vesca HOM05D007485 ORTHO05D009437 2.1e-30 136.3 133 57.1
PGR083G2217 Punica granatum HOM05D007485 ORTHO05D009437 2.1e-30 136.3 136 58.8
arahy.Tifrunner.gnm1.ann1.9XF3L6 Arachis hypogaea HOM05D007485 ORTHO05D009437 2.7e-30 136.0 133 57.9
Phvul.008G122300 Phaseolus vulgaris HOM05D007485 ORTHO05D009437 2.7e-30 136.0 136 55.1
Glyma.08G357300 Glycine max HOM05D007485 ORTHO05D009437 3.6e-30 135.6 136 55.9
Gorai.001G234600 Gossypium raimondii HOM05D007485 ORTHO05D009437 6.1e-30 134.8 149 58.4
Potri.002G251800 Populus trichocarpa HOM05D007485 ORTHO05D009437 1.4e-29 133.7 136 57.4
FAN27G2610 Fragaria x ananassa HOM05D007485 ORTHO05D009437 2.3e-29 132.9 133 57.1
Lj1g0002217 Lotus japonicus HOM05D007485 ORTHO05D009437 6.8e-29 131.3 133 55.6
Manes.12G043200 Manihot esculenta HOM05D007485 ORTHO05D009437 8.8e-29 131.0 135 60.7
Migut.D00513 Erythranthe guttata HOM05D007485 ORTHO05D009437 2.2e-27 126.3 127 62.2
Lalb_Chr19g0125461 Lupinus albus HOM05D007485 ORTHO05D009437 6.3e-27 124.8 133 54.1
MSTRG.18375 Avicennia marina HOM05D007485 ORTHO05D009437 1.1e-26 124.0 124 58.9
GSVIVG01028546001 Vitis vinifera HOM05D007485 ORTHO05D009437 1.1e-26 124.0 135 58.5
Rhsim13G0042600 Rhododendron simsii HOM05D007485 ORTHO05D009437 1.4e-26 123.6 118 61.9
CANSAT01G1289 Cannabis sativa HOM05D007485 ORTHO05D009437 1.8e-26 123.2 154 47.4
Ciclev10022604m.g Citrus clementina HOM05D007485 ORTHO05D009437 2.4e-26 122.9 133 53.4
arahy.Tifrunner.gnm1.ann1.W4TMFE Arachis hypogaea HOM05D007485 ORTHO05D009437 4.1e-26 122.1 164 47.6
Solyc06g007990.4 Solanum lycopersicum HOM05D007485 ORTHO05D009437 4.1e-26 122.1 121 57.0
Cc01_g17350 Coffea canephora HOM05D007485 ORTHO05D009437 1.6e-25 120.2 114 57.9
FAN15G2643 Fragaria x ananassa HOM05D007485 ORTHO05D009437 2.0e-25 119.8 136 52.9
SalBow6G3754 Salvia bowleyana HOM05D007485 ORTHO05D009437 2.0e-25 119.8 135 53.3
Sopen06g002830 Solanum pennellii HOM05D007485 ORTHO05D009437 2.0e-25 119.8 121 56.2
vmacro02738 Vaccinium macrocarpon HOM05D007485 ORTHO05D009437 2.0e-25 119.8 161 50.9
Nitab4.5_0001740g0030 Nicotiana tabacum HOM05D007485 ORTHO05D009437 4.5e-25 118.6 143 50.3
Peaxi162Scf00499g00019 Petunia axillaris HOM05D007485 ORTHO05D009437 5.9e-25 118.2 137 54.7
Medtr7g059255 Medicago truncatula HOM05D007485 ORTHO05D009437 1.7e-24 116.7 136 52.9
CAN.G322.118 Capsicum annuum HOM05D007485 ORTHO05D009437 6.5e-24 114.8 123 55.3
EL10Ac7g17803 Beta vulgaris HOM05D007485 ORTHO05D009437 1.1e-23 114.0 114 56.1
CsaV3_3G028690 Cucumis sativus L. HOM05D007485 ORTHO05D009437 1.5e-23 113.6 137 51.8
SGA_v2.0_scaffold1G00709 Striga asiatica HOM05D007485 ORTHO05D009437 2.5e-23 112.8 103 62.1
Sed0027911 Sechium edule HOM05D007485 ORTHO05D009437 5.5e-23 111.7 130 53.1
AUR62031821 Chenopodium quinoa HOM05D007485 ORTHO05D009437 9.4e-23 110.9 136 52.9
MELO3C012792.2 Cucumis melo HOM05D007485 ORTHO05D009437 9.4e-23 110.9 133 51.9
Lsat_1_v5_gn_9_12821 Lactuca sativa HOM05D007485 ORTHO05D009437 1.2e-22 110.5 133 50.4
Sc05g0002340 Simmondsia chinensis HOM05D007485 ORTHO05D009437 1.2e-22 110.5 133 54.9
Nn1g03123 Nelumbo nucifera HOM05D007485 ORTHO05D009437 2.1e-22 109.8 136 52.9
Psat0s3317g0040 Pisum sativum HOM05D007485 ORTHO05D009437 3.6e-22 109.0 130 53.1
MBI10_g09190_MAGBIO Magnolia biondii HOM05D007485 ORTHO05D009437 8.0e-22 107.8 134 51.5
AL9U10750 Arabidopsis lyrata HOM05D007485 ORTHO05D009437 1.8e-21 106.7 106 57.5
THA.LOC104808772 Tarenaya hassleriana HOM05D007485 ORTHO05D009437 1.8e-21 106.7 137 50.4
Thhalv10026377m.g Eutrema salsugineum HOM05D007485 ORTHO05D009437 2.3e-21 106.3 109 57.8
AT4G13220 Arabidopsis thaliana HOM05D007485 ORTHO05D009437 4.0e-21 105.5 126 53.2
Carub.0007s2945 Capsella rubella HOM05D007485 ORTHO05D009437 4.0e-21 105.5 105 58.1
A08p33350 Brassica napus HOM05D007485 ORTHO05D009437 1.2e-20 104.0 142 52.1
BcaB03g13243 Brassica carinata HOM05D007485 ORTHO05D009437 2.0e-20 103.2 108 60.2
C08p14780 Brassica napus HOM05D007485 ORTHO05D009437 2.0e-20 103.2 108 58.3
BcaC07g38678 Brassica carinata HOM05D007485 ORTHO05D009437 2.6e-20 102.8 140 52.1
BolC8t49113H Brassica oleracea HOM05D007485 ORTHO05D009437 2.6e-20 102.8 140 52.1
BraA08t35252Z Brassica rapa HOM05D007485 ORTHO05D009437 3.4e-20 102.4 109 58.7
Eucgr.C02436 Eucalyptus grandis HOM05D007485 ORTHO05D009437 3.4e-20 102.4 146 49.3
Hund18369 Selenicereus undatus HOM05D007485 ORTHO05D009437 5.7e-20 101.7 132 51.5
CARHR126310 Cardamine hirsuta HOM05D007485 ORTHO05D009437 7.5e-20 101.3 105 59.0
ECA247G1773 Erigeron canadensis HOM05D007485 ORTHO05D009437 7.5e-20 101.3 81 65.4
Aqoxy2G03844 Aquilegia oxysepala HOM05D007485 ORTHO05D009437 9.8e-20 100.9 79 68.4
Sp7g10710 Schrenkiella parvula HOM05D007485 ORTHO05D009437 9.8e-20 100.9 149 45.6
CARHR218700 Cardamine hirsuta HOM05D007485 ORTHO05D009437 8.3e-19 97.8 124 50.0
HPP92_025808 Vanilla planifolia HOM05D007485 ORTHO05D009437 1.1e-18 97.4 104 55.8
AUR62008887 Chenopodium quinoa HOM05D007485 ORTHO05D009437 1.8e-18 96.7 137 51.1
Aa31LG9G4570 Aethionema arabicum HOM05D007485 ORTHO05D009437 4.1e-18 95.5 113 54.0
HanXRQChr15g0468381 Helianthus annuus HOM05D007485 ORTHO05D009437 7.0e-18 94.7 72 70.8
Os12g0276100 Oryza sativa ssp. japonica HOM05D007485 ORTHO05D009437 1.6e-17 93.6 67 68.7
PSO017G5507 Papaver somniferum HOM05D007485 ORTHO05D009437 3.5e-17 92.4 101 55.4
ATR0088G060 Amborella trichopoda HOM05D007485 ORTHO05D009437 3.8e-16 89.0 56 80.4
PGSC0003DMG400014703 Solanum tuberosum HOM05D007485 ORTHO05D009437 3.3e-15 85.9 56 75.0
CDE12G0678 Ceratophyllum demersum HOM05D007485 ORTHO05D009437 9.5e-15 84.3 80 56.2
TPR.G9157 Trifolium pratense HOM05D007485 ORTHO05D009437 2.1e-14 83.2 59 71.2
Zm00001eb102490 Zea mays HOM05D007485 ORTHO05D009437 2.8e-14 82.8 66 63.6
PSO063G7151 Papaver somniferum HOM05D007485 ORTHO05D009437 1.4e-13 80.5 89 56.2
unitig_0.g180 Utricularia gibba HOM05D007485 ORTHO05D009437 2.3e-13 79.7 85 49.4
HanXRQChr12g0377041 Helianthus annuus HOM05D007485 ORTHO05D009437 3.4e-12 75.9 115 44.3
Zm00001eb317800 Zea mays HOM05D007485 ORTHO05D009437 3.4e-12 75.9 63 58.7
Nitab4.5_0003180g0040 Nicotiana tabacum HOM05D007485 ORTHO05D009437 2.9e-11 72.8 136 36.0
ClCG07G001710 Citrullus lanatus HOM05D007485 ORTHO05D009437 7.0e-10 68.2 102 47.1
Mapoly0101s0026 Marchantia polymorpha HOM05D007485 ORTHO05D009437 1.5e-07 60.5 54 57.4
THA.LOC104804650 Tarenaya hassleriana HOM05D007485 ORTHO05D009437 2.5e-07 59.7 98 42.9


User provided reference genes

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