Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p044390 Quercus lobata HOM05D007427 ORTHO05D006413 2.1e-30 136.0 128 100.0
CiPaw.04G107800 Carya illinoinensis HOM05D007427 ORTHO05D006413 3.3e-20 102.1 64 81.2
QL09p044388 Quercus lobata HOM05D007427 ORTHO05D006413 2.2e-19 99.4 54 94.4
Haze_24760 Corylus avellana HOM05D007427 ORTHO05D006413 3.1e-18 95.5 60 80.0
CiPaw.03G152700 Carya illinoinensis HOM05D007427 ORTHO05D006413 4.5e-17 91.7 70 77.1
CiPaw.04G107700 Carya illinoinensis HOM05D007427 ORTHO05D006413 1.2e-14 83.6 68 66.2
COL.COLO4_28358 Corchorus olitorius HOM05D007427 ORTHO05D006413 3.0e-13 79.0 63 60.3
Duzib138G0914 Durio zibethinus HOM05D007427 ORTHO05D006413 3.0e-13 79.0 56 69.6
Actinidia23744 Actinidia chinensis HOM05D007427 ORTHO05D006413 4.0e-13 78.6 55 70.9
Rhsim13G0042300 Rhododendron simsii HOM05D007427 ORTHO05D006413 8.8e-13 77.4 67 62.7
Glyma.03G170800 Glycine max HOM05D007427 ORTHO05D006413 2.0e-12 76.3 68 58.8
Thecc.01G231600 Theobroma cacao HOM05D007427 ORTHO05D006413 2.6e-12 75.9 55 61.8
Ciclev10022672m.g Citrus clementina HOM05D007427 ORTHO05D006413 3.4e-12 75.5 73 54.8
Lalb_Chr25g0289621 Lupinus albus HOM05D007427 ORTHO05D006413 4.4e-12 75.1 54 63.0
Duzib211G0080 Durio zibethinus HOM05D007427 ORTHO05D006413 5.7e-12 74.7 52 65.4
Prupe.8G208000 Prunus persica HOM05D007427 ORTHO05D006413 7.5e-12 74.3 57 68.4
VMungo1383G3325 Vigna mungo HOM05D007427 ORTHO05D006413 9.8e-12 73.9 55 63.6
Glyma.19G171900 Glycine max HOM05D007427 ORTHO05D006413 1.3e-11 73.6 57 61.4
Lalb_Chr01g0019331 Lupinus albus HOM05D007427 ORTHO05D006413 1.3e-11 73.6 55 60.0
Phvul.001G168900 Phaseolus vulgaris HOM05D007427 ORTHO05D006413 1.3e-11 73.6 55 61.8
TAR362G1030 Trochodendron aralioides HOM05D007427 ORTHO05D006413 1.3e-11 73.6 43 74.4
Lj1g0018605 Lotus japonicus HOM05D007427 ORTHO05D006413 1.7e-11 73.2 54 64.8
Cpa.g.sc8.193 Carica papaya HOM05D007427 ORTHO05D006413 2.2e-11 72.8 57 68.4
Glyma.03G170900 Glycine max HOM05D007427 ORTHO05D006413 2.8e-11 72.4 57 63.2
Hma1.2p1_1858F.1_g305540 Hydrangea macrophylla HOM05D007427 ORTHO05D006413 2.8e-11 72.4 54 63.0
MD05G1181500 Malus domestica HOM05D007427 ORTHO05D006413 3.7e-11 72.0 68 61.8
CSS0029156 Camellia sinensis var. sinensis HOM05D007427 ORTHO05D006413 4.8e-11 71.6 60 66.7
CSS0036288 Camellia sinensis var. sinensis HOM05D007427 ORTHO05D006413 4.8e-11 71.6 60 66.7
Thecc.01G231700 Theobroma cacao HOM05D007427 ORTHO05D006413 4.8e-11 71.6 67 55.2
Dinv19234 Davidia involucrata HOM05D007427 ORTHO05D006413 6.3e-11 71.2 54 63.0
Nn3g19877 Nelumbo nucifera HOM05D007427 ORTHO05D006413 6.3e-11 71.2 64 65.6
CANSAT01G2272 Cannabis sativa HOM05D007427 ORTHO05D006413 8.3e-11 70.9 80 52.5
Ca_08774_v3 Cicer arietinum L. HOM05D007427 ORTHO05D006413 8.3e-11 70.9 55 61.8
Sabra02G0191700 Salix brachista HOM05D007427 ORTHO05D006413 8.3e-11 70.9 69 55.1
Ciclev10022773m.g Citrus clementina HOM05D007427 ORTHO05D006413 1.4e-10 70.1 73 53.4
Medtr7g099670 Medicago truncatula HOM05D007427 ORTHO05D006413 1.4e-10 70.1 67 58.2
TWI59G1478 Tripterygium wilfordii HOM05D007427 ORTHO05D006413 1.4e-10 70.1 57 66.7
Potri.002G252400 Populus trichocarpa HOM05D007427 ORTHO05D006413 1.8e-10 69.7 63 58.7
arahy.Tifrunner.gnm1.ann1.KG3A2Z Arachis hypogaea HOM05D007427 ORTHO05D006413 2.4e-10 69.3 58 63.8
Lj1g0008336 Lotus japonicus HOM05D007427 ORTHO05D006413 5.4e-10 68.2 57 63.2
COL.COLO4_17317 Corchorus olitorius HOM05D007427 ORTHO05D006413 9.1e-10 67.4 59 59.3
Glyma.19G171800 Glycine max HOM05D007427 ORTHO05D006413 9.1e-10 67.4 67 55.2
Gohir.A07G154400 Gossypium hirsutum HOM05D007427 ORTHO05D006413 2.0e-09 66.2 51 62.7
Gohir.D07G160800 Gossypium hirsutum HOM05D007427 ORTHO05D006413 2.0e-09 66.2 51 62.7
Gorai.001G183700 Gossypium raimondii HOM05D007427 ORTHO05D006413 2.0e-09 66.2 51 62.7
ClCG09G009340 Citrullus lanatus HOM05D007427 ORTHO05D006413 2.7e-09 65.9 64 51.6
Gohir.A07G154300 Gossypium hirsutum HOM05D007427 ORTHO05D006413 2.7e-09 65.9 71 47.9
Gohir.D07G160600 Gossypium hirsutum HOM05D007427 ORTHO05D006413 2.7e-09 65.9 71 47.9
RcHm_v2.0_Chr6g0285411 Rosa chinensis HOM05D007427 ORTHO05D006413 3.5e-09 65.5 70 58.6
Cpa.g.sc8.192 Carica papaya HOM05D017908 ORTHO05D020344 4.5e-09 65.1 45 68.9
Glyma.10G043100 Glycine max HOM05D007427 ORTHO05D006413 4.5e-09 65.1 56 64.3
Phvul.007G156700 Phaseolus vulgaris HOM05D007427 ORTHO05D006413 4.5e-09 65.1 55 61.8
Sed0020523 Sechium edule HOM05D007427 ORTHO05D006413 4.5e-09 65.1 59 55.9
Psat6g064560 Pisum sativum HOM05D007427 ORTHO05D006413 5.9e-09 64.7 66 56.1
CsaV3_7G025650 Cucumis sativus L. HOM05D007427 ORTHO05D006413 7.7e-09 64.3 59 54.2
Atru.chr5.1886 Acer truncatum HOM05D007427 ORTHO05D006413 1.0e-08 63.9 73 56.2
MELO3C024163.2 Cucumis melo HOM05D007427 ORTHO05D006413 1.0e-08 63.9 64 54.7
Medtr1g069085 Medicago truncatula HOM05D007427 ORTHO05D006413 1.0e-08 63.9 56 62.5
Duzib138G0919 Durio zibethinus HOM05D007427 ORTHO05D006413 1.3e-08 63.5 79 41.8
Psat3g049800 Pisum sativum HOM05D007427 ORTHO05D006413 1.7e-08 63.2 68 57.4
Glyma.13G130600 Glycine max HOM05D007427 ORTHO05D006413 2.2e-08 62.8 52 61.5
Duzib138G1712 Durio zibethinus HOM05D007427 ORTHO05D006413 2.9e-08 62.4 39 66.7
Nitab4.5_0001740g0060 Nicotiana tabacum HOM05D007427 ORTHO05D006413 6.5e-08 61.2 52 65.4
SGA_v2.0_scaffold42G16152 Striga asiatica HOM05D007427 ORTHO05D006413 6.5e-08 61.2 74 51.4
SGA_v2.0_scaffold1G00704 Striga asiatica HOM05D007427 ORTHO05D006413 8.5e-08 60.8 58 53.4
FvH4_2g19680 Fragaria vesca HOM05D007427 ORTHO05D006413 1.5e-07 60.1 60 61.7
FAN24G2151 Fragaria x ananassa HOM05D007427 ORTHO05D006413 1.5e-07 60.1 60 61.7
MELO3C012793.2 Cucumis melo HOM05D007427 ORTHO05D006413 1.9e-07 59.7 54 55.6
FAN15G2923 Fragaria x ananassa HOM05D007427 ORTHO05D006413 1.9e-07 59.7 60 61.7
FAN27G1788 Fragaria x ananassa HOM05D007427 ORTHO05D006413 1.9e-07 59.7 60 61.7
SalBow4G2254 Salvia bowleyana HOM05D007427 ORTHO05D006413 1.9e-07 59.7 56 57.1
CsaV3_7G025680 Cucumis sativus L. HOM05D007427 ORTHO05D006413 2.5e-07 59.3 53 52.8
Gohir.D08G211500 Gossypium hirsutum HOM05D007427 ORTHO05D006413 2.5e-07 59.3 71 45.1
Gorai.004G224800 Gossypium raimondii HOM05D007427 ORTHO05D006413 2.5e-07 59.3 71 45.1
ClCG09G009270 Citrullus lanatus HOM05D007427 ORTHO05D006413 3.2e-07 58.9 59 52.5
CsaV3_3G039490 Cucumis sativus L. HOM05D007427 ORTHO05D006413 3.2e-07 58.9 64 51.6
Gohir.A08G193800 Gossypium hirsutum HOM05D007427 ORTHO05D006413 3.2e-07 58.9 71 45.1
Potri.002G252200 Populus trichocarpa HOM05D007427 ORTHO05D006413 3.2e-07 58.9 44 61.4
Nn1g03106 Nelumbo nucifera HOM05D007427 ORTHO05D006413 4.2e-07 58.5 59 49.2
MSTRG.21440 Avicennia marina HOM05D007427 ORTHO05D006413 5.5e-07 58.2 67 49.3
Cc01_g17390 Coffea canephora HOM05D007427 ORTHO05D006413 5.5e-07 58.2 55 58.2
Oeu052109.1 Olea europaea HOM05D038651 ORTHO05D006413 7.2e-07 57.8 50 64.0
Oeu052110.1 Olea europaea HOM05D038651 ORTHO05D006413 7.2e-07 57.8 50 64.0
Oeu052111.1 Olea europaea HOM05D038651 ORTHO05D006413 7.2e-07 57.8 50 64.0
PGSC0003DMG400015809 Solanum tuberosum HOM05D014142 ORTHO05D006413 7.2e-07 57.8 51 64.7
Manes.12G043600 Manihot esculenta HOM05D007427 ORTHO05D006413 9.4e-07 57.4 68 48.5
Manes.13G043400 Manihot esculenta HOM05D007427 ORTHO05D006413 1.2e-06 57.0 56 53.6
MSTRG.17537 Avicennia marina HOM05D007427 ORTHO05D006413 1.6e-06 56.6 69 52.2
TWI59G0432 Tripterygium wilfordii HOM05D064064 ORTHO05D006413 1.6e-06 56.6 43 67.4
Gorai.001G183600 Gossypium raimondii HOM05D007427 ORTHO05D006413 2.1e-06 56.2 66 43.9
Thecc.01G231300 Theobroma cacao HOM05D017908 ORTHO05D020344 2.1e-06 56.2 49 59.2
Sabra02G0191600 Salix brachista HOM05D017908 ORTHO05D006413 2.7e-06 55.8 45 53.3
Oeu017346.1 Olea europaea HOM05D032567 ORTHO05D036960 3.6e-06 55.5 42 61.9
SGA_v2.0_scaffold8G04664 Striga asiatica HOM05D007427 ORTHO05D006413 3.6e-06 55.5 50 54.0
PSO017G4218 Papaver somniferum HOM05D007427 ORTHO05D006413 4.7e-06 55.1 64 53.1
PSO063G2436 Papaver somniferum HOM05D007427 ORTHO05D006413 4.7e-06 55.1 64 53.1
THA.LOC104804025 Tarenaya hassleriana HOM05D009947 ORTHO05D012150 4.7e-06 55.1 47 61.7
Gorai.001G183800 Gossypium raimondii HOM05D017908 ORTHO05D020344 6.1e-06 54.7 49 55.1
unitig_8.g3079 Utricularia gibba HOM05D007427 ORTHO05D006413 6.1e-06 54.7 70 41.4
Migut.N02250 Erythranthe guttata HOM05D007427 ORTHO05D006413 8.0e-06 54.3 68 51.5
unitig_22.g6317 Utricularia gibba HOM05D007427 ORTHO05D006413 8.0e-06 54.3 68 45.6


User provided reference genes

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