Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p044005 Quercus lobata HOM05D001235 ORTHO05D001610 4.7e-55 217.6 110 100.0
QL09p044015 Quercus lobata HOM05D001235 ORTHO05D001610 1.6e-42 176.0 101 90.1
QL09p044033 Quercus lobata HOM05D001235 ORTHO05D001610 1.3e-41 172.9 101 86.1
QL09p044061 Quercus lobata HOM05D001235 ORTHO05D001610 1.1e-35 153.3 101 80.2
QL09p043992 Quercus lobata HOM05D001235 ORTHO05D001610 4.7e-31 137.9 101 73.3
CiPaw.03G153300 Carya illinoinensis HOM05D001235 ORTHO05D001610 4.6e-18 94.7 90 55.6
Duzib138G0593 Durio zibethinus HOM05D001235 ORTHO05D001610 2.3e-17 92.4 93 53.8
CiPaw.04G108500 Carya illinoinensis HOM05D001235 ORTHO05D001610 1.9e-16 89.4 88 54.5
Haze_24744 Corylus avellana HOM05D001235 ORTHO05D001610 7.3e-16 87.4 97 52.6
Cfa002520 Carpinus fangiana HOM05D001235 ORTHO05D001610 6.2e-15 84.3 85 54.1
Haze_24743 Corylus avellana HOM05D001235 ORTHO05D001610 1.4e-14 83.2 85 52.9
Gohir.D07G208400 Gossypium hirsutum HOM05D001235 ORTHO05D001610 1.4e-14 83.2 70 60.0
Gorai.001G235200 Gossypium raimondii HOM05D001235 ORTHO05D001610 1.4e-14 83.2 70 60.0
Cfa017723 Carpinus fangiana HOM05D001235 ORTHO05D001610 4.0e-14 81.6 85 52.9
Gohir.A07G202200 Gossypium hirsutum HOM05D001235 ORTHO05D001610 9.0e-14 80.5 70 58.6
GSVIVG01014514001 Vitis vinifera HOM05D001235 ORTHO05D001610 2.0e-13 79.3 69 55.1
Gorai.001G235300 Gossypium raimondii HOM05D001235 ORTHO05D001610 1.7e-12 76.3 70 52.9
Actinidia37572 Actinidia chinensis HOM05D002889 ORTHO05D003366 6.4e-12 74.3 79 48.1
Gohir.A07G202250 Gossypium hirsutum HOM05D001235 ORTHO05D001610 6.4e-12 74.3 99 44.4
Gohir.A07G202150 Gossypium hirsutum HOM05D001235 ORTHO05D001610 8.4e-12 73.9 70 54.3
Thecc.01G236500 Theobroma cacao HOM05D001235 ORTHO05D001610 7.1e-11 70.9 49 67.3
Gohir.D07G208350 Gossypium hirsutum HOM05D001235 ORTHO05D001610 9.3e-11 70.5 68 54.4
Rhsim01G0258400 Rhododendron simsii HOM05D002889 ORTHO05D003366 9.3e-11 70.5 70 47.1
TAR362G1105 Trochodendron aralioides HOM05D001235 ORTHO05D001610 9.3e-11 70.5 85 47.1
GSVIVG01028495001 Vitis vinifera HOM05D001235 ORTHO05D001610 9.3e-11 70.5 68 47.1
DCAR_010844 Daucus carota HOM05D001235 ORTHO05D001610 1.2e-10 70.1 72 50.0
CANSAT01G0638 Cannabis sativa HOM05D001235 ORTHO05D001610 1.6e-10 69.7 68 52.9
Gohir.D07G208450 Gossypium hirsutum HOM05D001235 ORTHO05D001610 2.7e-10 68.9 65 50.8
CANSAT01G1725 Cannabis sativa HOM05D001235 ORTHO05D001610 4.6e-10 68.2 68 52.9
Dinv32201 Davidia involucrata HOM05D001235 ORTHO05D001610 1.3e-09 66.6 77 39.0
TAR365G0591 Trochodendron aralioides HOM05D001235 ORTHO05D001610 3.0e-09 65.5 81 44.4
Aqoxy5G00614 Aquilegia oxysepala HOM05D001235 ORTHO05D001610 8.7e-09 63.9 68 48.5
DCAR_016374 Daucus carota HOM05D001235 ORTHO05D001610 1.5e-08 63.2 72 47.2
FvH4_2g19811 Fragaria vesca HOM05D001235 ORTHO05D001610 3.3e-08 62.0 90 38.9
FAN24G2961 Fragaria x ananassa HOM05D003286 ORTHO05D002463 3.3e-08 62.0 90 38.9
TAR362G0194 Trochodendron aralioides HOM05D001235 ORTHO05D001610 4.3e-08 61.6 98 37.8
Duzib138G1895 Durio zibethinus HOM05D001235 ORTHO05D001610 5.6e-08 61.2 76 40.8
Actinidia33667 Actinidia chinensis HOM05D001235 ORTHO05D001610 7.3e-08 60.8 91 37.4
DCAR_016377 Daucus carota HOM05D001235 ORTHO05D001610 7.3e-08 60.8 72 47.2
Migut.M01873 Erythranthe guttata HOM05D001235 ORTHO05D001610 7.3e-08 60.8 69 44.9
RcHm_v2.0_Chr6g0285541 Rosa chinensis HOM05D001235 ORTHO05D001610 7.3e-08 60.8 95 42.1
Gohir.D08G210900 Gossypium hirsutum HOM05D001235 ORTHO05D001610 9.6e-08 60.5 74 43.2
Cpa.g.sc8.202 Carica papaya HOM05D001235 ORTHO05D001610 1.3e-07 60.1 67 47.8
DCAR_005740 Daucus carota HOM05D001235 ORTHO05D001610 1.3e-07 60.1 72 45.8
Gohir.A08G192900 Gossypium hirsutum HOM05D001235 ORTHO05D001610 1.6e-07 59.7 74 40.5
Gorai.004G223600 Gossypium raimondii HOM05D001235 ORTHO05D001610 1.6e-07 59.7 74 43.2
MBI11_g00133_MAGBIO Magnolia biondii HOM05D001235 ORTHO05D000852 1.6e-07 59.7 95 40.0
DCAR_005648 Daucus carota HOM05D001235 ORTHO05D001610 2.1e-07 59.3 69 42.0
FAN15G1751 Fragaria x ananassa HOM05D003286 ORTHO05D002463 2.1e-07 59.3 83 39.8
Hma1.2p1_0689F.1_g203720 Hydrangea macrophylla HOM05D001235 ORTHO05D001610 2.8e-07 58.9 77 39.0
Dinv15892 Davidia involucrata HOM05D001235 ORTHO05D001610 4.8e-07 58.2 79 38.0
Gorai.009G291500 Gossypium raimondii HOM05D001235 ORTHO05D001610 4.8e-07 58.2 62 53.2
CSS0005175 Camellia sinensis var. sinensis HOM05D001235 ORTHO05D001610 6.2e-07 57.8 73 35.6
COL.COLO4_38181 Corchorus olitorius HOM05D001235 ORTHO05D001610 6.2e-07 57.8 88 36.4
FAN27G1731 Fragaria x ananassa HOM05D003286 ORTHO05D002463 6.2e-07 57.8 82 39.0
AUR62026109 Chenopodium quinoa HOM05D001235 ORTHO05D001610 8.1e-07 57.4 94 35.1
DCAR_005672 Daucus carota HOM05D001235 ORTHO05D001610 8.1e-07 57.4 65 47.7
Eucgr.H00821 Eucalyptus grandis HOM05D001235 ORTHO05D001610 8.1e-07 57.4 67 46.3
Lalb_Chr25g0289691 Lupinus albus HOM05D001235 ORTHO05D001610 8.1e-07 57.4 62 46.8
Ca_08754_v3 Cicer arietinum L. HOM05D001235 ORTHO05D001610 1.1e-06 57.0 67 41.8
Thecc.01G236400 Theobroma cacao HOM05D001235 ORTHO05D001610 1.1e-06 57.0 66 45.5
CiPaw.04G108400 Carya illinoinensis HOM05D001235 ORTHO05D001610 1.4e-06 56.6 88 37.5
Ciclev10024122m.g Citrus clementina HOM05D001235 ORTHO05D001610 1.4e-06 56.6 66 45.5
COL.COLO4_10349 Corchorus olitorius HOM05D001235 ORTHO05D001610 1.4e-06 56.6 93 34.4
COL.COLO4_13957 Corchorus olitorius HOM05D001235 ORTHO05D001610 1.4e-06 56.6 86 36.0
FAN15G3742 Fragaria x ananassa HOM05D001235 ORTHO05D001610 1.4e-06 56.6 95 34.7
Manes.12G044300 Manihot esculenta HOM05D001235 ORTHO05D001610 1.4e-06 56.6 65 41.5
CDE02G3575 Ceratophyllum demersum HOM05D001235 ORTHO05D001610 1.8e-06 56.2 66 43.9
DCAR_005650 Daucus carota HOM05D001235 ORTHO05D001610 1.8e-06 56.2 72 40.3
FvH4_2g19810 Fragaria vesca HOM05D001235 ORTHO05D001610 1.8e-06 56.2 66 40.9
FAN24G2146 Fragaria x ananassa HOM05D001235 ORTHO05D001610 1.8e-06 56.2 66 40.9
TWI34G0360 Tripterygium wilfordii HOM05D001235 ORTHO05D001610 1.8e-06 56.2 62 43.5
FvH4_2g19840 Fragaria vesca HOM05D001235 ORTHO05D001610 2.4e-06 55.8 95 33.7
FAN24G1954 Fragaria x ananassa HOM05D001235 ORTHO05D001610 2.4e-06 55.8 95 33.7
Glyma.03G170100 Glycine max HOM05D001235 ORTHO05D001610 2.4e-06 55.8 63 44.4
Potri.009G108000 Populus trichocarpa HOM05D001235 ORTHO05D001610 2.4e-06 55.8 70 38.6
Ca_08770_v3 Cicer arietinum L. HOM05D001235 ORTHO05D001610 3.1e-06 55.5 64 43.8
Gohir.A05G276232 Gossypium hirsutum HOM05D001235 ORTHO05D001610 3.1e-06 55.5 42 69.0
TWI14G1144 Tripterygium wilfordii HOM05D001235 ORTHO05D001610 3.1e-06 55.5 66 43.9
Atru.chr5.1928 Acer truncatum HOM05D001235 ORTHO05D001610 4.0e-06 55.1 69 40.6
arahy.Tifrunner.gnm1.ann1.JRB4HK Arachis hypogaea HOM05D001235 ORTHO05D001610 4.0e-06 55.1 64 42.2
CSS0008762 Camellia sinensis var. sinensis HOM05D001235 ORTHO05D001610 4.0e-06 55.1 89 34.8
Gohir.A08G105701 Gossypium hirsutum HOM05D001235 ORTHO05D001610 4.0e-06 55.1 64 40.6
AUR62024520 Chenopodium quinoa HOM05D001235 ORTHO05D001610 5.3e-06 54.7 63 42.9
Ciclev10006872m.g Citrus clementina HOM05D001235 ORTHO05D001610 5.3e-06 54.7 73 42.5
Aqoxy5G00539 Aquilegia oxysepala HOM05D001235 ORTHO05D001610 6.9e-06 54.3 70 37.1
ClCG11G010210 Citrullus lanatus HOM05D001235 ORTHO05D001610 6.9e-06 54.3 63 38.1
DCAR_005326 Daucus carota HOM05D001235 ORTHO05D001610 6.9e-06 54.3 72 40.3
MD10G1170800 Malus domestica HOM05D001235 ORTHO05D001610 6.9e-06 54.3 66 42.4
Medtr7g098910 Medicago truncatula HOM05D001235 ORTHO05D001610 6.9e-06 54.3 80 36.2
Medtr7g099500 Medicago truncatula HOM05D001235 ORTHO05D001610 6.9e-06 54.3 64 42.2
Rhsim13G0119300 Rhododendron simsii HOM05D001235 ORTHO05D001610 6.9e-06 54.3 66 39.4
Thecc.05G265000 Theobroma cacao HOM05D001235 ORTHO05D001610 6.9e-06 54.3 75 38.7
AL6G38340 Arabidopsis lyrata HOM05D001235 ORTHO05D001610 9.0e-06 53.9 71 39.4
CDE02G3521 Ceratophyllum demersum HOM05D003800 ORTHO05D004549 9.0e-06 53.9 64 42.2
AUR62026111 Chenopodium quinoa HOM05D001235 ORTHO05D001610 9.0e-06 53.9 62 41.9
Lalb_Chr20g0113351 Lupinus albus HOM05D001235 ORTHO05D001610 9.0e-06 53.9 63 42.9
Oeu060298.1 Olea europaea HOM05D001235 ORTHO05D001610 9.0e-06 53.9 66 39.4


User provided reference genes

Program Settings