Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p041460 Quercus lobata HOM05D007042 ORTHO05D008441 3.6e-150 535.0 297 100.0
Haze_24706 Corylus avellana HOM05D007042 ORTHO05D008441 2.2e-67 260.0 297 52.9
CiPaw.03G270900 Carya illinoinensis HOM05D007042 ORTHO05D008441 1.4e-64 250.8 290 52.1
CiPaw.04G190700 Carya illinoinensis HOM05D007042 ORTHO05D008441 2.3e-64 250.0 298 51.3
Potri.002G256700 Populus trichocarpa HOM05D007042 ORTHO05D008441 3.9e-64 249.2 297 50.2
Dinv16402 Davidia involucrata HOM05D007042 ORTHO05D008441 1.3e-62 244.2 290 50.0
Manes.12G044501 Manihot esculenta HOM05D007042 ORTHO05D008441 3.1e-61 239.6 297 48.5
Thecc.01G250400 Theobroma cacao HOM05D007042 ORTHO05D008441 3.1e-61 239.6 290 48.6
GSVIVG01028431001 Vitis vinifera HOM05D007042 ORTHO05D008441 9.1e-61 238.0 297 48.8
Dinv43069 Davidia involucrata HOM05D007042 ORTHO05D008441 1.5e-60 237.3 297 48.8
Hma1.2p1_2139F.1_g314960 Hydrangea macrophylla HOM05D007042 ORTHO05D008441 2.0e-60 236.9 297 47.1
Gorai.001G181700 Gossypium raimondii HOM05D007042 ORTHO05D008441 4.5e-60 235.7 297 47.1
Gohir.A07G152300 Gossypium hirsutum HOM05D007042 ORTHO05D008441 1.0e-59 234.6 297 46.8
Gohir.D07G158500 Gossypium hirsutum HOM05D007042 ORTHO05D008441 6.5e-59 231.9 297 46.5
Eucgr.H04779 Eucalyptus grandis HOM05D007042 ORTHO05D008441 1.4e-58 230.7 296 47.3
Cfa002484 Carpinus fangiana HOM05D007042 ORTHO05D008441 2.5e-58 229.9 276 49.6
TWI18G1052 Tripterygium wilfordii HOM05D007042 ORTHO05D008441 1.6e-57 227.3 297 46.1
Atru.chr5.1857 Acer truncatum HOM05D007042 ORTHO05D008441 2.7e-57 226.5 297 47.5
Ciclev10022455m.g Citrus clementina HOM05D007042 ORTHO05D008441 4.7e-57 225.7 289 47.4
Prupe.8G215500 Prunus persica HOM05D007042 ORTHO05D008441 6.1e-57 225.3 297 47.5
arahy.Tifrunner.gnm1.ann1.UI445S Arachis hypogaea HOM05D007042 ORTHO05D008441 1.8e-56 223.8 297 45.5
TAR633G0993 Trochodendron aralioides HOM05D007042 ORTHO05D008441 1.8e-56 223.8 297 45.8
arahy.Tifrunner.gnm1.ann1.T4WIMW Arachis hypogaea HOM05D007042 ORTHO05D008441 3.0e-56 223.0 297 45.5
Lj1A74G98 Lonicera japonica HOM05D007042 ORTHO05D008441 3.0e-56 223.0 297 46.1
Cpa.g.sc87.28 Carica papaya HOM05D007042 ORTHO05D008441 5.1e-56 222.2 290 46.2
Duzib133G0775 Durio zibethinus HOM05D007042 ORTHO05D008441 6.7e-56 221.9 297 45.8
CSS0015019 Camellia sinensis var. sinensis HOM05D007042 ORTHO05D008441 8.8e-56 221.5 290 47.2
MD10G1176500 Malus domestica HOM05D007042 ORTHO05D008441 2.6e-55 219.9 296 44.6
Cc02_g07760 Coffea canephora HOM05D007042 ORTHO05D008441 5.7e-55 218.8 300 46.0
Sed0010391 Sechium edule HOM05D007042 ORTHO05D008441 5.7e-55 218.8 283 45.2
Nn1g02976 Nelumbo nucifera HOM05D007042 ORTHO05D008441 9.7e-55 218.0 290 45.9
Solyc04g011530.3 Solanum lycopersicum HOM05D007042 ORTHO05D008441 2.8e-54 216.5 299 45.5
Oeu048243.1 Olea europaea HOM05D007042 ORTHO05D008441 6.3e-54 215.3 286 43.7
Actinidia09516 Actinidia chinensis HOM05D007042 ORTHO05D008441 1.1e-53 214.5 290 46.6
Glyma.19G168400 Glycine max HOM05D007042 ORTHO05D008441 1.1e-53 214.5 297 44.8
ECA247G0849 Erigeron canadensis HOM05D007042 ORTHO05D008441 1.8e-53 213.8 297 43.8
PGSC0003DMG400027743 Solanum tuberosum HOM05D007042 ORTHO05D008441 2.4e-53 213.4 299 45.8
CAN.G786.8 Capsicum annuum HOM05D007042 ORTHO05D008441 3.1e-53 213.0 290 44.1
CsaV3_6G007350 Cucumis sativus L. HOM05D007042 ORTHO05D008441 4.1e-53 212.6 290 43.8
Glyma.03G167300 Glycine max HOM05D007042 ORTHO05D008441 4.1e-53 212.6 290 45.5
HanXRQChr15g0468211 Helianthus annuus HOM05D007042 ORTHO05D008441 4.1e-53 212.6 295 42.7
Sopen04g005710 Solanum pennellii HOM05D007042 ORTHO05D008441 4.1e-53 212.6 299 44.8
Lj1g0019034 Lotus japonicus HOM05D007042 ORTHO05D008441 5.3e-53 212.2 294 44.2
Nitab4.5_0010166g0010 Nicotiana tabacum HOM05D007042 ORTHO05D008441 5.3e-53 212.2 297 44.1
MD05G1188900 Malus domestica HOM05D007042 ORTHO05D008441 7.0e-53 211.8 295 42.7
Psat3g054000 Pisum sativum HOM05D007042 ORTHO05D008441 9.1e-53 211.5 282 46.8
Aqoxy5G00144 Aquilegia oxysepala HOM05D007042 ORTHO05D008441 2.0e-52 210.3 294 43.2
Lsat_1_v5_gn_9_11480 Lactuca sativa HOM05D007042 ORTHO05D008441 2.6e-52 209.9 293 43.0
RcHm_v2.0_Chr6g0286631 Rosa chinensis HOM05D007042 ORTHO05D008441 2.6e-52 209.9 300 42.0
vmacro14796 Vaccinium macrocarpon HOM05D007042 ORTHO05D008441 3.5e-52 209.5 297 43.8
MELO3C022392.2 Cucumis melo HOM05D007042 ORTHO05D008441 4.5e-52 209.1 290 43.4
VMungo1383G0900 Vigna mungo HOM05D007042 ORTHO05D008441 1.0e-51 208.0 293 43.7
Phvul.001G164800 Phaseolus vulgaris HOM05D007042 ORTHO05D008441 1.3e-51 207.6 290 44.1
Medtr7g098470 Medicago truncatula HOM05D007042 ORTHO05D008441 8.5e-51 204.9 292 44.9
Nitab4.5_0013552g0010 Nicotiana tabacum HOM05D007042 ORTHO05D008441 1.1e-50 204.5 297 42.8
PGR031G2106 Punica granatum HOM05D007042 ORTHO05D008441 1.1e-50 204.5 267 46.4
SalBow3G0444 Salvia bowleyana HOM05D007042 ORTHO05D008441 1.9e-50 203.8 296 43.2
Ca_08743_v3 Cicer arietinum L. HOM05D007042 ORTHO05D008441 4.2e-50 202.6 290 44.1
ClCG06G001410 Citrullus lanatus HOM05D007042 ORTHO05D008441 9.4e-50 201.4 270 44.4
Peaxi162Scf00760g00324 Petunia axillaris HOM05D007042 ORTHO05D008441 2.7e-49 199.9 147 67.3
EL10Ac7g17687 Beta vulgaris HOM05D007042 ORTHO05D008441 4.7e-49 199.1 297 40.7
SGA_v2.0_scaffold94G28473 Striga asiatica HOM05D007042 ORTHO05D008441 4.7e-49 199.1 162 61.1
Actinidia27524 Actinidia chinensis HOM05D007042 ORTHO05D008441 3.0e-48 196.4 129 72.1
Rhsim01G0260600 Rhododendron simsii HOM05D007042 ORTHO05D008441 3.0e-48 196.4 172 56.4
AUR62025440 Chenopodium quinoa HOM05D007042 ORTHO05D008441 1.5e-47 194.1 282 41.1
Lalb_Chr20g0113621 Lupinus albus HOM05D007042 ORTHO05D008441 4.4e-47 192.6 289 42.9
THA.LOC104814528 Tarenaya hassleriana HOM05D007042 ORTHO05D008441 3.7e-46 189.5 296 40.9
Migut.F00782 Erythranthe guttata HOM05D007042 ORTHO05D008441 6.3e-46 188.7 295 40.3
Thhalv10002102m.g Eutrema salsugineum HOM05D007042 ORTHO05D008441 1.4e-45 187.6 291 41.6
FvH4_2g20510 Fragaria vesca HOM05D007042 ORTHO05D008441 1.4e-45 187.6 300 39.0
CDE06G0115 Ceratophyllum demersum HOM05D007042 ORTHO05D008441 2.4e-45 186.8 283 41.0
CARHR110910 Cardamine hirsuta HOM05D007042 ORTHO05D008441 4.1e-45 186.0 297 40.4
Sp3g33630 Schrenkiella parvula HOM05D007042 ORTHO05D008441 9.1e-45 184.9 296 40.9
AUR62008799 Chenopodium quinoa HOM05D007042 ORTHO05D008441 2.6e-44 183.3 260 40.0
BcaB03g16831 Brassica carinata HOM05D007042 ORTHO05D008441 3.5e-44 183.0 296 40.5
A07p00340 Brassica napus HOM05D007042 ORTHO05D008441 5.9e-44 182.2 297 40.1
Aa31LG8G17370 Aethionema arabicum HOM05D007042 ORTHO05D008441 1.0e-43 181.4 296 39.5
BcaC06g36726 Brassica carinata HOM05D007042 ORTHO05D008441 1.3e-43 181.0 294 39.8
C07p00700 Brassica napus HOM05D007042 ORTHO05D008441 1.3e-43 181.0 294 39.8
BolC7t40512H Brassica oleracea HOM05D007042 ORTHO05D008441 1.3e-43 181.0 294 39.8
Sc17g0002810 Simmondsia chinensis HOM05D007042 ORTHO05D008441 6.5e-43 178.7 275 40.0
AL3G53360 Arabidopsis lyrata HOM05D007042 ORTHO05D008441 8.5e-43 178.3 297 39.7
FAN24G0975 Fragaria x ananassa HOM05D003075 ORTHO05D003430 1.1e-42 177.9 280 38.6
Hund05486 Selenicereus undatus HOM05D000914 ORTHO05D000718 1.5e-42 177.6 275 38.9
BraA07t27825Z Brassica rapa HOM05D007042 ORTHO05D008441 3.2e-42 176.4 277 41.2
Carub.0003s3477 Capsella rubella HOM05D007042 ORTHO05D008441 3.2e-42 176.4 296 39.9
SHI26738 Sapria himalayana HOM05D007042 ORTHO05D008441 4.2e-42 176.0 289 38.4
FAN15G2210 Fragaria x ananassa HOM05D007042 ORTHO05D008441 7.2e-42 175.3 280 38.2
AT2G20390 Arabidopsis thaliana HOM05D007042 ORTHO05D008441 3.6e-41 172.9 297 39.4
ATR0787G115 Amborella trichopoda HOM05D007042 ORTHO05D008441 1.0e-40 171.4 295 38.3
PSO170G0149 Papaver somniferum HOM05D007042 ORTHO05D008441 1.5e-39 167.5 282 38.3
FAN27G0500 Fragaria x ananassa HOM05D007042 ORTHO05D008441 4.8e-38 162.5 265 37.7
Actinidia23697 Actinidia chinensis HOM05D007042 ORTHO05D008441 8.3e-38 161.8 287 39.7
PSO063G2627 Papaver somniferum HOM05D007042 ORTHO05D008441 1.1e-37 161.4 280 36.8
HPP92_014817 Vanilla planifolia HOM05D007042 ORTHO05D008441 4.1e-37 159.5 136 55.1
Os04g0129600 Oryza sativa ssp. japonica HOM05D007042 ORTHO05D008441 9.1e-37 158.3 115 60.0
Sabra02G0195200 Salix brachista HOM05D007042 ORTHO05D008441 1.6e-36 157.5 231 44.2
Zm00001eb088930 Zea mays HOM05D007042 ORTHO05D008441 3.2e-34 149.8 126 52.4
SHI06358 Sapria himalayana HOM05D007042 ORTHO05D008441 1.2e-33 147.9 112 61.6
TPR.G20062 Trifolium pratense HOM05D007042 ORTHO05D008441 2.7e-33 146.7 231 42.9
Zm00001eb307520 Zea mays HOM05D007042 ORTHO05D008441 5.9e-28 129.0 96 59.4
COL.COLO4_03573 Corchorus olitorius HOM05D007042 ORTHO05D008441 1.3e-27 127.9 210 41.0
SEGI_30132 Sequoiadendron giganteum HOM05D007042 ORTHO05D008441 6.1e-25 119.0 123 44.7
CDE04G2760 Ceratophyllum demersum HOM05D007042 ORTHO05D008441 1.2e-23 114.8 69 72.5
SEGI_30900 Sequoiadendron giganteum HOM05D007042 ORTHO05D008441 1.5e-23 114.4 128 43.0
FAN27G0749 Fragaria x ananassa HOM05D003075 ORTHO05D003430 3.4e-23 113.2 212 34.4
Os02g0754800 Oryza sativa ssp. japonica HOM05D007042 ORTHO05D008441 8.3e-22 108.6 108 51.9
TPR.G20307 Trifolium pratense HOM05D007042 ORTHO05D008441 2.0e-20 104.0 76 67.1
AagrBONN_evm.TU.Sc2ySwM_228.1144 Anthoceros agrestis HOM05D007042 ORTHO05D008441 4.4e-15 86.3 100 43.0
Potri.014G193150 Populus trichocarpa HOM05D007042 ORTHO05D008441 3.7e-14 83.2 66 69.7
SMO116G0088 Selaginella moellendorffii HOM05D001526 ORTHO05D008441 7.0e-13 79.0 108 40.7
EL10As2g23173 Beta vulgaris HOM05D007042 ORTHO05D008441 2.7e-12 77.0 55 56.4
Mapoly0078s0039 Marchantia polymorpha HOM05D007042 ORTHO05D008441 3.9e-11 73.2 89 47.2
Pp3c18_10950 Physcomitrium patens HOM05D007042 ORTHO05D008441 8.9e-08 62.0 102 34.3


User provided reference genes

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