Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p041310 Quercus lobata HOM05D014916 ORTHO05D009575 4.5e-83 311.2 160 100.0
CiPaw.03G270400 Carya illinoinensis HOM05D014916 ORTHO05D009575 2.1e-27 126.3 145 53.1
Thecc.01G251000 Theobroma cacao HOM05D014916 ORTHO05D009575 7.1e-20 101.3 142 44.4
Duzib138G0893 Durio zibethinus HOM05D014916 ORTHO05D009575 2.7e-19 99.4 124 54.0
TAR365G0204 Trochodendron aralioides HOM05D008157 ORTHO05D009575 4.6e-19 98.6 153 40.5
Dinv27113 Davidia involucrata HOM05D008157 ORTHO05D009575 3.1e-15 85.9 121 43.8
Prupe.8G216000 Prunus persica HOM05D017729 ORTHO05D022643 4.0e-15 85.5 148 41.2
Gohir.A07G152000 Gossypium hirsutum HOM05D014916 ORTHO05D009575 2.0e-14 83.2 140 43.6
Haze_24700 Corylus avellana HOM05D008157 ORTHO05D009575 8.4e-13 77.8 134 42.5
Gohir.D07G158200 Gossypium hirsutum HOM05D014916 ORTHO05D009575 3.2e-12 75.9 126 46.0
Gorai.001G181400 Gossypium raimondii HOM05D014916 ORTHO05D009575 3.2e-12 75.9 126 46.0
Potri.014G192701 Populus trichocarpa HOM05D008157 ORTHO05D009575 3.2e-12 75.9 160 36.9
Nn1g02959 Nelumbo nucifera HOM05D008157 ORTHO05D009575 5.5e-12 75.1 131 38.2
GSVIVG01028417001 Vitis vinifera HOM05D008157 ORTHO05D009575 1.6e-11 73.6 149 37.6
MBI10_g35435_MAGBIO Magnolia biondii HOM05D008157 ORTHO05D009575 2.1e-11 73.2 130 41.5
Manes.12G036500 Manihot esculenta HOM05D014916 ORTHO05D009575 2.1e-11 73.2 148 39.9
Sabra08G0131300 Salix brachista HOM05D008157 ORTHO05D009575 3.5e-11 72.4 146 38.4
Hma1.2p1_0273F.1_g109240 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 2.3e-10 69.7 119 39.5
Potri.008G172000 Populus trichocarpa HOM05D008157 ORTHO05D009575 2.3e-10 69.7 135 39.3
Manes.15G045800 Manihot esculenta HOM05D008157 ORTHO05D009575 5.1e-10 68.6 150 39.3
CiPaw.02G106900 Carya illinoinensis HOM05D008157 ORTHO05D009575 6.7e-10 68.2 140 40.0
Hma1.2p1_1702F.1_g298280 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 8.7e-10 67.8 119 38.7
Glyma.10G040300 Glycine max HOM05D016547 ORTHO05D009575 1.1e-09 67.4 143 34.3
PGR004G0105 Punica granatum HOM05D008157 ORTHO05D009575 1.1e-09 67.4 132 38.6
Thecc.04G264100 Theobroma cacao HOM05D008157 ORTHO05D009575 1.5e-09 67.0 122 33.6
QL06p021011 Quercus lobata HOM05D008157 ORTHO05D009575 1.9e-09 66.6 149 34.9
TAR633G2472 Trochodendron aralioides HOM05D008157 ORTHO05D009575 2.5e-09 66.2 98 44.9
Potri.010G065666 Populus trichocarpa HOM05D008157 ORTHO05D009575 4.3e-09 65.5 136 35.3
PSO832G3861 Papaver somniferum HOM05D008157 ORTHO05D009575 7.4e-09 64.7 119 41.2
Psat6g107200 Pisum sativum HOM05D016547 ORTHO05D009575 9.7e-09 64.3 143 36.4
SalBow2G3016 Salvia bowleyana HOM05D008157 ORTHO05D009575 9.7e-09 64.3 112 37.5
Aqoxy5G00149 Aquilegia oxysepala HOM05D000655 ORTHO05D001635 1.6e-08 63.5 72 48.6
Manes.03G158800 Manihot esculenta HOM05D008157 ORTHO05D009575 2.2e-08 63.2 148 31.8
VMungo0720G0558 Vigna mungo HOM05D016547 ORTHO05D009575 2.2e-08 63.2 145 29.7
ClCG05G003990 Citrullus lanatus HOM05D008157 ORTHO05D009575 8.2e-08 61.2 147 35.4
Peaxi162Scf00153g01844 Petunia axillaris HOM05D008157 ORTHO05D009575 8.2e-08 61.2 121 37.2
Rhsim02G0043800 Rhododendron simsii HOM05D008157 ORTHO05D009575 1.4e-07 60.5 115 36.5
PSO764G0012 Papaver somniferum HOM05D008157 ORTHO05D009575 1.8e-07 60.1 93 41.9
Prupe.1G048400 Prunus persica HOM05D008157 ORTHO05D009575 4.1e-07 58.9 120 34.2
EL10Ac3g06669 Beta vulgaris HOM05D008157 ORTHO05D009575 1.2e-06 57.4 136 33.8
TWI09G0993 Tripterygium wilfordii HOM05D008157 ORTHO05D009575 1.2e-06 57.4 147 29.9
Cc03_g06320 Coffea canephora HOM05D008157 ORTHO05D009575 1.5e-06 57.0 115 36.5
Cc09_g08530 Coffea canephora HOM05D008157 ORTHO05D009575 1.5e-06 57.0 115 36.5
Haze_11459 Corylus avellana HOM05D008157 ORTHO05D009575 1.5e-06 57.0 148 33.1
FvH4_4g04630 Fragaria vesca HOM05D008157 ORTHO05D009575 2.6e-06 56.2 124 37.9
FAN12G3964 Fragaria x ananassa HOM05D008157 ORTHO05D009575 2.6e-06 56.2 141 34.8
CANSAT78G1852 Cannabis sativa HOM05D008157 ORTHO05D009575 4.5e-06 55.5 142 34.5
FvH4_2g20360 Fragaria vesca HOM05D017729 ORTHO05D022643 4.5e-06 55.5 131 32.8
Gohir.A02G043000 Gossypium hirsutum HOM05D008157 ORTHO05D009575 5.9e-06 55.1 118 34.7
Gohir.D02G048700 Gossypium hirsutum HOM05D008157 ORTHO05D009575 1.0e-05 54.3 118 33.9


User provided reference genes

Program Settings