Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p039118 Quercus lobata HOM05D000732 ORTHO05D007766 1.2e-90 336.7 186 100.0
QL02p086159 Quercus lobata HOM05D000732 ORTHO05D007766 1.7e-49 199.9 174 70.7
CiPaw.03G235500 Carya illinoinensis HOM05D000732 ORTHO05D007766 2.1e-47 193.0 175 67.4
Cpa.g.sc23.147 Carica papaya HOM05D000732 ORTHO05D007766 1.7e-41 173.3 174 61.5
Manes.16G064600 Manihot esculenta HOM05D000732 ORTHO05D007766 1.5e-40 170.2 176 61.4
Cfa003294 Carpinus fangiana HOM05D000732 ORTHO05D007766 1.9e-40 169.9 176 61.9
Lj7A641T80 Lonicera japonica HOM05D000732 ORTHO05D007766 6.1e-39 164.9 173 58.4
GSVIVG01015437001 Vitis vinifera HOM05D000732 ORTHO05D007766 2.3e-38 162.9 175 60.6
Dinv36601 Davidia involucrata HOM05D000732 ORTHO05D007766 2.0e-37 159.8 176 59.1
Gohir.D07G003900 Gossypium hirsutum HOM05D000732 ORTHO05D007766 2.0e-37 159.8 174 57.5
Gorai.001G003600 Gossypium raimondii HOM05D000732 ORTHO05D007766 2.0e-37 159.8 174 57.5
Phvul.003G176500 Phaseolus vulgaris HOM05D000732 ORTHO05D007766 2.6e-37 159.5 175 58.9
VMungo1215G0150 Vigna mungo HOM05D000732 ORTHO05D007766 2.6e-37 159.5 174 57.5
Haze_25677 Corylus avellana HOM05D000732 ORTHO05D007766 4.4e-37 158.7 176 59.1
Duzib168G0694 Durio zibethinus HOM05D000732 ORTHO05D007766 4.4e-37 158.7 174 58.0
Thecc.09G115300 Theobroma cacao HOM05D000732 ORTHO05D007766 7.5e-37 157.9 174 58.6
Glyma.05G012600 Glycine max HOM05D000732 ORTHO05D007766 2.2e-36 156.4 175 59.4
ClCG06G010420 Citrullus lanatus HOM05D000732 ORTHO05D007766 3.7e-36 155.6 173 57.8
CsaV3_1G030890 Cucumis sativus L. HOM05D000732 ORTHO05D007766 4.8e-36 155.2 173 57.8
Duzib150G1244 Durio zibethinus HOM05D000732 ORTHO05D007766 4.8e-36 155.2 175 57.1
Potri.018G072500 Populus trichocarpa HOM05D000732 ORTHO05D007766 4.8e-36 155.2 173 57.8
MELO3C025312.2 Cucumis melo HOM05D000732 ORTHO05D007766 1.1e-35 154.1 173 57.8
Gohir.D05G022500 Gossypium hirsutum HOM05D000732 ORTHO05D007766 1.1e-35 154.1 174 57.5
Gorai.009G022800 Gossypium raimondii HOM05D000732 ORTHO05D007766 1.1e-35 154.1 174 57.5
Glyma.17G120700 Glycine max HOM05D000732 ORTHO05D007766 3.1e-35 152.5 176 58.0
Gohir.A05G021100 Gossypium hirsutum HOM05D000732 ORTHO05D007766 3.1e-35 152.5 174 56.9
TWI63G1811 Tripterygium wilfordii HOM05D000732 ORTHO05D007766 3.1e-35 152.5 174 57.5
Aqoxy4G03286 Aquilegia oxysepala HOM05D000732 ORTHO05D007766 4.1e-35 152.1 184 55.4
FAN26G3024 Fragaria x ananassa HOM05D000732 ORTHO05D007766 4.1e-35 152.1 178 56.7
CSS0025977 Camellia sinensis var. sinensis HOM05D000732 ORTHO05D007766 9.1e-35 151.0 181 56.9
PGSC0003DMG400000381 Solanum tuberosum HOM05D000732 ORTHO05D007766 9.1e-35 151.0 177 57.6
PGR142G0209 Punica granatum HOM05D000732 ORTHO05D007766 1.2e-34 150.6 179 57.0
FAN28G2903 Fragaria x ananassa HOM05D000732 ORTHO05D007766 2.7e-34 149.4 178 55.6
Solyc12g007020.2 Solanum lycopersicum HOM05D000732 ORTHO05D007766 2.7e-34 149.4 177 57.6
Sabra18G0064100 Salix brachista HOM05D000732 ORTHO05D007766 4.5e-34 148.7 172 57.0
vmacro20673 Vaccinium macrocarpon HOM05D000732 ORTHO05D007766 4.5e-34 148.7 175 57.1
CSS0041308 Camellia sinensis var. sinensis HOM05D000732 ORTHO05D007766 5.9e-34 148.3 181 55.8
Nitab4.5_0003537g0030 Nicotiana tabacum HOM05D000732 ORTHO05D007766 1.0e-33 147.5 175 57.7
FAN19G2164 Fragaria x ananassa HOM05D000732 ORTHO05D007766 2.9e-33 146.0 178 55.1
COL.COLO4_34937 Corchorus olitorius HOM05D000732 ORTHO05D007766 3.8e-33 145.6 174 55.2
Eucgr.C01078 Eucalyptus grandis HOM05D000732 ORTHO05D007766 3.8e-33 145.6 174 56.9
FvH4_1g05440 Fragaria vesca HOM05D000732 ORTHO05D007766 6.5e-33 144.8 178 54.5
RcHm_v2.0_Chr2g0091101 Rosa chinensis HOM05D000732 ORTHO05D007766 1.5e-32 143.7 177 52.5
Nitab4.5_0012119g0020 Nicotiana tabacum HOM05D000732 ORTHO05D007766 1.9e-32 143.3 175 56.6
Cc06_g09290 Coffea canephora HOM05D000732 ORTHO05D007766 9.4e-32 141.0 175 54.3
CSS0014403 Camellia sinensis var. sinensis HOM05D000732 ORTHO05D007766 1.6e-31 140.2 175 53.7
CSS0032766 Camellia sinensis var. sinensis HOM05D000732 ORTHO05D007766 2.1e-31 139.8 175 53.7
MSTRG.19330 Avicennia marina HOM05D000732 ORTHO05D007766 2.7e-31 139.4 178 55.1
FAN26G1785 Fragaria x ananassa HOM05D000732 ORTHO05D007766 2.7e-31 139.4 177 53.7
arahy.Tifrunner.gnm1.ann1.3B9WQN Arachis hypogaea HOM05D000732 ORTHO05D007766 3.6e-31 139.0 179 54.2
Oeu063087.1 Olea europaea HOM05D000732 ORTHO05D007766 3.6e-31 139.0 178 56.2
TAR369G0294 Trochodendron aralioides HOM05D000732 ORTHO05D007766 1.0e-30 137.5 182 53.3
arahy.Tifrunner.gnm1.ann1.H7525J Arachis hypogaea HOM05D000732 ORTHO05D007766 1.8e-30 136.7 178 53.9
Actinidia09400 Actinidia chinensis HOM05D000732 ORTHO05D007766 2.3e-30 136.3 172 54.7
PSO339G1373 Papaver somniferum HOM05D000732 ORTHO05D007766 2.3e-30 136.3 177 55.9
Aa31LG9G4370 Aethionema arabicum HOM05D000732 ORTHO05D007766 3.0e-30 136.0 183 54.6
AL9U10290 Arabidopsis lyrata HOM05D000732 ORTHO05D007766 4.0e-30 135.6 189 55.0
Peaxi162Scf00546g00222 Petunia axillaris HOM05D000732 ORTHO05D007766 8.8e-30 134.4 180 53.9
Sc08g0007130 Simmondsia chinensis HOM05D000732 ORTHO05D007766 1.2e-29 134.0 179 51.4
Actinidia20336 Actinidia chinensis HOM05D000732 ORTHO05D007766 2.6e-29 132.9 172 52.9
MBI03_g15322_MAGBIO Magnolia biondii HOM05D000732 ORTHO05D007766 2.6e-29 132.9 162 54.3
Prupe.7G226800 Prunus persica HOM05D000732 ORTHO05D007766 2.6e-29 132.9 176 51.7
Ca_02543_v3 Cicer arietinum L. HOM05D000732 ORTHO05D007766 4.4e-29 132.1 175 51.4
CDE06G0908 Ceratophyllum demersum HOM05D000732 ORTHO05D007766 5.7e-29 131.7 176 52.3
Medtr4g112035 Medicago truncatula HOM05D000732 ORTHO05D007766 1.3e-28 130.6 176 52.8
Gohir.A07G003500 Gossypium hirsutum HOM05D000732 ORTHO05D007766 2.8e-28 129.4 174 52.9
Atru.chr7.1292 Acer truncatum HOM05D000732 ORTHO05D007766 4.8e-28 128.6 177 51.4
CDE07G0191 Ceratophyllum demersum HOM05D000732 ORTHO05D007766 4.8e-28 128.6 176 52.3
Migut.J00742 Erythranthe guttata HOM05D000732 ORTHO05D007766 4.8e-28 128.6 180 52.2
FAN23G2640 Fragaria x ananassa HOM05D000732 ORTHO05D007766 1.4e-27 127.1 178 52.8
CARHR218940 Cardamine hirsuta HOM05D000732 ORTHO05D007766 2.4e-27 126.3 190 47.9
Ciclev10007618m.g Citrus clementina HOM05D000732 ORTHO05D007766 2.4e-27 126.3 174 52.3
Thhalv10024576m.g Eutrema salsugineum HOM05D000732 ORTHO05D007766 2.4e-27 126.3 189 51.9
A08p06980 Brassica napus HOM05D000732 ORTHO05D007766 3.1e-27 125.9 175 52.0
Rhsim01G0091300 Rhododendron simsii HOM05D000732 ORTHO05D007766 5.4e-27 125.2 175 51.4
AT4G13370 Arabidopsis thaliana HOM05D000732 ORTHO05D007766 7.0e-27 124.8 191 49.7
ECA233G4892 Erigeron canadensis HOM05D000732 ORTHO05D007766 7.0e-27 124.8 198 46.0
CAN.G1710.7 Capsicum annuum HOM05D000732 ORTHO05D007766 9.1e-27 124.4 150 57.3
Sopen12g002990 Solanum pennellii HOM05D000732 ORTHO05D007766 9.1e-27 124.4 175 53.7
HanXRQChr05g0139151 Helianthus annuus HOM05D000732 ORTHO05D007766 1.2e-26 124.0 183 47.5
MD15G1190300 Malus domestica HOM05D000732 ORTHO05D007766 1.6e-26 123.6 185 49.7
BraA08t32708Z Brassica rapa HOM05D000732 ORTHO05D007766 2.0e-26 123.2 175 51.4
THA.LOC104804579 Tarenaya hassleriana HOM05D000732 ORTHO05D007766 2.0e-26 123.2 189 52.4
Lalb_Chr07g0178631 Lupinus albus HOM05D000732 ORTHO05D007766 2.7e-26 122.9 142 54.2
Lj4g0018297 Lotus japonicus HOM05D000732 ORTHO05D007766 3.5e-26 122.5 182 49.5
BcaB04g17701 Brassica carinata HOM05D000732 ORTHO05D007766 5.9e-26 121.7 187 51.9
MD02G1062500 Malus domestica HOM05D000417 ORTHO05D007766 5.9e-26 121.7 185 49.7
SGA_v2.0_scaffold112G31681 Striga asiatica HOM05D000732 ORTHO05D007766 1.0e-25 120.9 179 52.0
Sp7g10950 Schrenkiella parvula HOM05D000732 ORTHO05D007766 2.9e-25 119.4 188 48.9
Carub.0007s2920 Capsella rubella HOM05D000732 ORTHO05D007766 8.6e-25 117.9 190 48.9
Psat4g042960 Pisum sativum HOM05D000732 ORTHO05D007766 2.5e-24 116.3 178 47.2
Sed0023905 Sechium edule HOM05D000732 ORTHO05D007766 2.5e-24 116.3 173 46.8
DCAR_023979 Daucus carota HOM05D000732 ORTHO05D007766 4.2e-24 115.5 142 52.1
C08p08240 Brassica napus HOM05D000732 ORTHO05D007766 5.5e-24 115.2 186 48.9
BcaC07g37375 Brassica carinata HOM05D000732 ORTHO05D007766 7.2e-24 114.8 189 48.1
Lsat_1_v5_gn_8_94621 Lactuca sativa HOM05D000732 ORTHO05D007766 7.2e-24 114.8 185 48.1
SGA_v2.0_scaffold31G12816 Striga asiatica HOM05D000732 ORTHO05D007766 1.6e-23 113.6 164 48.8
unitig_578.g15806 Utricularia gibba HOM05D000732 ORTHO05D007766 1.6e-23 113.6 177 47.5
BcaC07g37376 Brassica carinata HOM05D000732 ORTHO05D007766 2.8e-23 112.8 186 48.4
BolC8t47676H Brassica oleracea HOM05D000732 ORTHO05D007766 2.8e-23 112.8 186 48.4
BcaB03g16094 Brassica carinata HOM05D000732 ORTHO05D007766 3.6e-23 112.5 189 50.8
HanXRQChr06g0179201 Helianthus annuus HOM05D000732 ORTHO05D007766 4.7e-23 112.1 199 44.2
C04p42540 Brassica napus HOM05D000732 ORTHO05D007766 2.0e-21 106.7 187 49.7
BolC4t25829H Brassica oleracea HOM05D000732 ORTHO05D007766 4.4e-21 105.5 187 50.3
BcaC02g09430 Brassica carinata HOM05D000732 ORTHO05D007766 7.5e-21 104.8 187 49.2
SHI02610 Sapria himalayana HOM05D000732 ORTHO05D007766 2.0e-18 96.7 114 52.6
MD17G1097200 Malus domestica HOM05D000732 ORTHO05D007766 5.9e-18 95.1 176 42.6
RhsimUnG0237900 Rhododendron simsii HOM05D003889 ORTHO05D004407 1.7e-17 93.6 154 43.5
Rhsim12G0057900 Rhododendron simsii HOM05D000732 ORTHO05D338911 5.6e-16 88.6 174 43.1
EL10Ac8g18547 Beta vulgaris HOM05D000732 ORTHO05D007766 8.9e-14 81.3 185 41.6
Zm00001eb195530 Zea mays HOM05D000732 ORTHO05D007766 1.2e-13 80.9 161 40.4
AUR62033406 Chenopodium quinoa HOM05D000732 ORTHO05D007766 2.6e-13 79.7 186 41.4
HPP92_015436 Vanilla planifolia HOM05D000732 ORTHO05D007766 2.6e-13 79.7 199 36.2
Ah.09g226940 Amaranthus hybridus HOM05D000732 ORTHO05D007766 5.8e-13 78.6 183 39.9
Os11g0120200 Oryza sativa ssp. japonica HOM05D000732 ORTHO05D007766 7.5e-13 78.2 146 41.8
Os12g0120000 Oryza sativa ssp. japonica HOM05D000732 ORTHO05D007766 2.2e-12 76.6 203 36.9
Hund09178 Selenicereus undatus HOM05D000732 ORTHO05D007766 1.4e-11 73.9 191 38.7
BraA04t16570Z Brassica rapa HOM05D000732 ORTHO05D007766 6.0e-10 68.6 140 44.3
VMungo1215G3092 Vigna mungo HOM05D000732 ORTHO05D007766 3.9e-09 65.9 82 54.9
A04p08730 Brassica napus HOM05D000732 ORTHO05D007766 3.3e-08 62.8 140 40.0
Rhsim01G0104800 Rhododendron simsii HOM05D003889 ORTHO05D004407 5.6e-08 62.0 123 39.0
SEGI_19269 Sequoiadendron giganteum HOM05D000732 ORTHO05D007766 5.6e-08 62.0 195 37.4
ATR1127G067 Amborella trichopoda HOM05D000732 ORTHO05D007766 6.8e-06 55.1 128 37.5


User provided reference genes

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