Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p038994 Quercus lobata HOM05D000007 ORTHO05D000039 3.8e-102 374.8 180 100.0
QL11p053765 Quercus lobata HOM05D000007 ORTHO05D000039 1.4e-48 196.8 172 60.5
QL11p053855 Quercus lobata HOM05D000007 ORTHO05D000039 1.3e-46 190.3 147 68.0
QL11p053787 Quercus lobata HOM05D000007 ORTHO05D000039 8.5e-46 187.6 144 68.8
QL11p051903 Quercus lobata HOM05D000007 ORTHO05D000039 2.1e-44 183.0 150 63.3
QL09p039002 Quercus lobata HOM05D000007 ORTHO05D000039 3.7e-41 172.2 157 62.4
QL11p053745 Quercus lobata HOM05D000007 ORTHO05D000039 1.7e-38 163.3 177 55.4
QL11p053716 Quercus lobata HOM05D000007 ORTHO05D000039 2.2e-38 162.9 178 55.1
QL11p045818 Quercus lobata HOM05D000007 ORTHO05D000039 5.5e-37 158.3 174 51.7
QL07p008965 Quercus lobata HOM05D000007 ORTHO05D000039 2.8e-33 146.0 176 46.0
QL11p051724 Quercus lobata HOM05D000007 ORTHO05D000039 3.7e-33 145.6 175 48.0
QL07p021598 Quercus lobata HOM05D000007 ORTHO05D000039 1.6e-31 140.2 177 46.9
QL11p051861 Quercus lobata HOM05D000007 ORTHO05D000039 1.6e-31 140.2 175 46.9
QL11p051759 Quercus lobata HOM05D000007 ORTHO05D000039 4.2e-29 132.1 178 44.9
QL11p051917 Quercus lobata HOM05D000007 ORTHO05D000039 5.5e-29 131.7 178 44.9
QL11p019496 Quercus lobata HOM05D000007 ORTHO05D000039 1.2e-28 130.6 155 47.7
QL11p051732 Quercus lobata HOM05D000298 ORTHO05D000039 2.1e-28 129.8 178 44.4
QL11p051870 Quercus lobata HOM05D000007 ORTHO05D000039 6.1e-28 128.3 178 43.8
QL11p051941 Quercus lobata HOM05D000007 ORTHO05D000039 1.0e-27 127.5 178 44.4
QL11p051876 Quercus lobata HOM05D000007 ORTHO05D000039 3.0e-27 125.9 175 45.7
QL07p009006 Quercus lobata HOM05D000007 ORTHO05D000039 1.2e-26 124.0 172 42.4
QL07p009219 Quercus lobata HOM05D000007 ORTHO05D000039 7.5e-26 121.3 166 44.6
QL07p009452 Quercus lobata HOM05D000007 ORTHO05D000039 7.5e-26 121.3 166 44.6
QL07p009321 Quercus lobata HOM05D000007 ORTHO05D000039 9.8e-26 120.9 146 49.3
QL07p013628 Quercus lobata HOM05D000007 ORTHO05D000039 6.3e-25 118.2 143 47.6
QL07p009296 Quercus lobata HOM05D000007 ORTHO05D000039 1.1e-24 117.5 176 42.0
QL07p008986 Quercus lobata HOM05D000007 ORTHO05D000039 1.8e-24 116.7 188 40.4
QL05p031316 Quercus lobata HOM05D000007 ORTHO05D000039 9.2e-24 114.4 166 42.2
QL07p009501 Quercus lobata HOM05D000007 ORTHO05D000039 1.6e-23 113.6 165 46.7
QL07p009339 Quercus lobata HOM05D000007 ORTHO05D000039 2.7e-23 112.8 175 43.4
QL07p009314 Quercus lobata HOM05D000007 ORTHO05D000039 3.5e-23 112.5 176 42.0
QL07p009406 Quercus lobata HOM05D000007 ORTHO05D000039 3.5e-23 112.5 176 42.0
QL07p009596 Quercus lobata HOM05D000007 ORTHO05D000039 7.8e-23 111.3 176 40.9
QL07p009303 Quercus lobata HOM05D000007 ORTHO05D000039 1.0e-22 110.9 160 41.9
QL07p009205 Quercus lobata HOM05D000007 ORTHO05D000039 1.3e-22 110.5 135 50.4
QL07p009308 Quercus lobata HOM05D000007 ORTHO05D000039 1.3e-22 110.5 135 50.4
QL07p009412 Quercus lobata HOM05D000007 ORTHO05D000039 1.3e-22 110.5 135 50.4
QL07p009510 Quercus lobata HOM05D000007 ORTHO05D000039 1.3e-22 110.5 182 42.3
QL06p022021 Quercus lobata HOM05D000007 ORTHO05D000039 2.9e-22 109.4 128 51.6
QL07p009195 Quercus lobata HOM05D000007 ORTHO05D000039 2.9e-22 109.4 176 40.9
QL07p009358 Quercus lobata HOM05D000007 ORTHO05D000039 6.6e-22 108.2 176 40.3
QL07p009589 Quercus lobata HOM05D000007 ORTHO05D000039 1.6e-20 103.6 142 45.8
QL07p009141 Quercus lobata HOM05D000007 ORTHO05D000039 2.8e-20 102.8 151 43.7
QL07p009573 Quercus lobata HOM05D000007 ORTHO05D000039 8.0e-20 101.3 157 42.0
QL07p009225 Quercus lobata HOM05D000007 ORTHO05D000039 1.0e-19 100.9 132 47.7
QL07p009479 Quercus lobata HOM05D000007 ORTHO05D000039 4.0e-19 99.0 136 44.1
QL07p009457 Quercus lobata HOM05D000007 ORTHO05D000039 5.2e-19 98.6 132 46.2
QL07p009581 Quercus lobata HOM05D000007 ORTHO05D000039 8.9e-19 97.8 141 40.4
QL05p031347 Quercus lobata HOM05D000007 ORTHO05D000039 3.7e-17 92.4 129 45.7
QL07p009527 Quercus lobata HOM05D000007 ORTHO05D000039 3.7e-17 92.4 134 44.0
QL07p009619 Quercus lobata HOM05D000007 ORTHO05D000039 4.1e-16 89.0 161 37.9
QL07p009487 Quercus lobata HOM05D000007 ORTHO05D000039 1.6e-15 87.0 132 43.2
QL07p009676 Quercus lobata HOM05D000007 ORTHO05D000039 2.7e-15 86.3 121 39.7
QL07p013622 Quercus lobata HOM05D000007 ORTHO05D000039 3.3e-13 79.3 162 34.0
QL04p095467 Quercus lobata HOM05D000007 ORTHO05D000039 1.2e-12 77.4 148 37.2
QL07p013523 Quercus lobata HOM05D000007 ORTHO05D000039 1.6e-12 77.0 112 40.2
QL07p009682 Quercus lobata HOM05D000007 ORTHO05D000039 3.6e-12 75.9 127 37.0
Dinv24454 Davidia involucrata HOM05D000007 ORTHO05D000039 8.0e-12 74.7 137 31.4
QL04p037076 Quercus lobata HOM05D000007 ORTHO05D000039 1.1e-11 74.3 159 26.4
QL04p067556 Quercus lobata HOM05D000007 ORTHO05D000039 1.1e-11 74.3 167 32.3
MD12G1050800 Malus domestica HOM05D000007 ORTHO05D000039 3.4e-10 69.3 158 27.2
QL04p067441 Quercus lobata HOM05D000007 ORTHO05D000039 3.4e-10 69.3 167 31.7
Ciclev10011921m.g Citrus clementina HOM05D000007 ORTHO05D000039 4.4e-10 68.9 159 31.4
GSVIVG01013506001 Vitis vinifera HOM05D000007 ORTHO05D000039 4.4e-10 68.9 146 33.6
QL03p023798 Quercus lobata HOM05D000007 ORTHO05D000039 9.8e-10 67.8 149 32.2
QL03p023874 Quercus lobata HOM05D000007 ORTHO05D000039 9.8e-10 67.8 149 32.2
Solyc07g044920.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 2.2e-09 66.6 164 27.4
QL05p031333 Quercus lobata HOM05D000007 ORTHO05D000039 2.9e-09 66.2 171 31.0
Dinv07005 Davidia involucrata HOM05D000007 ORTHO05D000039 3.7e-09 65.9 153 25.5
Dinv24458 Davidia involucrata HOM05D000007 ORTHO05D000039 6.4e-09 65.1 115 37.4
COL.COLO4_12169 Corchorus olitorius HOM05D001005 ORTHO05D000836 8.3e-09 64.7 170 29.4
Prupe.3G047400 Prunus persica HOM05D000007 ORTHO05D000039 1.1e-08 64.3 140 29.3
Dinv07009 Davidia involucrata HOM05D000007 ORTHO05D000039 1.4e-08 63.9 153 25.5
QL04p037119 Quercus lobata HOM05D000007 ORTHO05D000039 1.4e-08 63.9 140 29.3
Cfa007560 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.9e-08 63.5 163 30.7
Dinv07011 Davidia involucrata HOM05D000007 ORTHO05D000039 1.9e-08 63.5 153 25.5
Lj8C20T2 Lonicera japonica HOM05D000007 ORTHO05D000039 1.9e-08 63.5 147 30.6
QL04p045916 Quercus lobata HOM05D000007 ORTHO05D000039 1.9e-08 63.5 164 29.9
QL07p003148 Quercus lobata HOM05D000007 ORTHO05D000039 1.9e-08 63.5 148 31.1
QL04p037158 Quercus lobata HOM05D000007 ORTHO05D000039 2.4e-08 63.2 154 30.5
QL12p002576 Quercus lobata HOM05D000007 ORTHO05D000039 2.4e-08 63.2 136 31.6
QL12p002756 Quercus lobata HOM05D000007 ORTHO05D000039 2.4e-08 63.2 136 31.6
Dinv24457 Davidia involucrata HOM05D000007 ORTHO05D000039 3.2e-08 62.8 133 30.8
Manes.03G115800 Manihot esculenta HOM05D000007 ORTHO05D000039 3.2e-08 62.8 137 29.2
QL04p005232 Quercus lobata HOM05D000007 ORTHO05D000039 3.2e-08 62.8 183 29.5
QL04p036890 Quercus lobata HOM05D000007 ORTHO05D000039 5.4e-08 62.0 161 31.1
QL04p045941 Quercus lobata HOM05D000007 ORTHO05D000039 5.4e-08 62.0 164 29.3
Dinv23704 Davidia involucrata HOM05D000007 ORTHO05D000039 7.0e-08 61.6 148 30.4
QL04p045611 Quercus lobata HOM05D000007 ORTHO05D000039 7.0e-08 61.6 171 26.3
Cc05_g06410 Coffea canephora HOM05D000007 ORTHO05D000039 9.2e-08 61.2 161 32.9
QL04p019425 Quercus lobata HOM05D000007 ORTHO05D000039 9.2e-08 61.2 166 28.3
TWI60G1487 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 9.2e-08 61.2 148 31.1
Actinidia07889 Actinidia chinensis HOM05D000007 ORTHO05D000039 1.2e-07 60.8 141 28.4
MD09G1130700 Malus domestica HOM05D000007 ORTHO05D000039 1.2e-07 60.8 144 25.7
QL04p037101 Quercus lobata HOM05D000007 ORTHO05D000039 1.2e-07 60.8 169 28.4
QL04p044901 Quercus lobata HOM05D000007 ORTHO05D000039 1.2e-07 60.8 146 28.1
QL07p003114 Quercus lobata HOM05D000007 ORTHO05D000039 1.2e-07 60.8 126 33.3
QL07p003314 Quercus lobata HOM05D000007 ORTHO05D000039 1.2e-07 60.8 106 35.8
QL07p003322 Quercus lobata HOM05D000007 ORTHO05D000039 1.2e-07 60.8 150 30.7
Dinv21276 Davidia involucrata HOM05D000007 ORTHO05D000039 1.6e-07 60.5 106 31.1
Dinv24453 Davidia involucrata HOM05D000007 ORTHO05D000039 1.6e-07 60.5 141 27.7
QL04p087902 Quercus lobata HOM05D000007 ORTHO05D000039 1.6e-07 60.5 136 33.8
QL08p020282 Quercus lobata HOM05D000007 ORTHO05D000039 1.6e-07 60.5 138 33.3
QL04p044939 Quercus lobata HOM05D000007 ORTHO05D000039 2.0e-07 60.1 162 29.6
QL04p044961 Quercus lobata HOM05D000007 ORTHO05D000039 2.0e-07 60.1 162 29.6
Oeu047067.1 Olea europaea HOM05D000007 ORTHO05D000017 2.7e-07 59.7 176 26.1
QL04p045513 Quercus lobata HOM05D000007 ORTHO05D000039 2.7e-07 59.7 157 30.6
QL08p019850 Quercus lobata HOM05D000007 ORTHO05D000039 2.7e-07 59.7 141 31.9
Eucgr.C02777 Eucalyptus grandis HOM05D000007 ORTHO05D000039 3.5e-07 59.3 98 37.8
Prupe.3G013300 Prunus persica HOM05D000007 ORTHO05D000039 3.5e-07 59.3 169 27.8
QL04p045477 Quercus lobata HOM05D000007 ORTHO05D000039 3.5e-07 59.3 142 28.2
Dinv24460 Davidia involucrata HOM05D000007 ORTHO05D000039 4.6e-07 58.9 158 29.1
QL04p037073 Quercus lobata HOM05D000007 ORTHO05D000039 4.6e-07 58.9 116 25.0
QL04p045574 Quercus lobata HOM05D000007 ORTHO05D000039 4.6e-07 58.9 164 29.3
QL09p021311 Quercus lobata HOM05D000007 ORTHO05D000039 4.6e-07 58.9 169 27.8
QL04p036302 Quercus lobata HOM05D000007 ORTHO05D000039 6.0e-07 58.5 138 32.6
QL04p045652 Quercus lobata HOM05D000007 ORTHO05D000039 6.0e-07 58.5 155 32.9
Dinv15480 Davidia involucrata HOM05D000007 ORTHO05D000039 1.0e-06 57.8 148 30.4
MD15G1153400 Malus domestica HOM05D000007 ORTHO05D000039 1.0e-06 57.8 144 25.7
Manes.02G142700 Manihot esculenta HOM05D000007 ORTHO05D000039 1.0e-06 57.8 132 31.8
QL11p050309 Quercus lobata HOM05D000007 ORTHO05D000039 1.0e-06 57.8 129 34.1
Rhsim09G0013700 Rhododendron simsii HOM05D000007 ORTHO05D000039 1.0e-06 57.8 154 27.9
Dinv24586 Davidia involucrata HOM05D000007 ORTHO05D000039 1.3e-06 57.4 104 32.7
Hma1.2p1_0901F.1_g234670 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 1.3e-06 57.4 134 28.4
Hma1.2p1_0901F.1_g234685 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 1.3e-06 57.4 134 28.4
Hma1.2p1_1150F.1_g261840 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 1.3e-06 57.4 134 28.4
PSO801G0026 Papaver somniferum HOM05D000007 ORTHO05D000017 1.3e-06 57.4 164 28.7
QL04p036457 Quercus lobata HOM05D000007 ORTHO05D000039 1.3e-06 57.4 148 33.1
QL04p036871 Quercus lobata HOM05D000007 ORTHO05D000039 1.3e-06 57.4 138 34.1
QL04p036880 Quercus lobata HOM05D000007 ORTHO05D000039 1.3e-06 57.4 138 34.1
vmacro00185 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 1.3e-06 57.4 163 26.4
vmacro23134 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 1.3e-06 57.4 163 26.4
Cpa.g.sc791.2 Carica papaya HOM05D000007 ORTHO05D000039 1.7e-06 57.0 136 30.1
QL11p050453 Quercus lobata HOM05D000007 ORTHO05D000039 1.7e-06 57.0 133 33.1
QL11p050671 Quercus lobata HOM05D000007 ORTHO05D000039 1.7e-06 57.0 136 35.3
Gohir.D04G045600 Gossypium hirsutum HOM05D000007 ORTHO05D000039 2.3e-06 56.6 123 29.3
QL03p023846 Quercus lobata HOM05D000007 ORTHO05D000039 2.3e-06 56.6 128 28.9
QL04p036087 Quercus lobata HOM05D000007 ORTHO05D000039 2.3e-06 56.6 148 33.1
QL04p036320 Quercus lobata HOM05D000007 ORTHO05D000039 2.3e-06 56.6 168 31.0
QL04p036953 Quercus lobata HOM05D000007 ORTHO05D000039 2.3e-06 56.6 130 33.1
RcHm_v2.0_Chr3g0456251 Rosa chinensis HOM05D000007 ORTHO05D000039 2.3e-06 56.6 168 26.8
GSVIVG01013538001 Vitis vinifera HOM05D000007 ORTHO05D001738 2.3e-06 56.6 167 24.6
Haze_13250 Corylus avellana HOM05D000007 ORTHO05D000039 3.0e-06 56.2 125 32.8
DCAR_019197 Daucus carota HOM05D000007 ORTHO05D000039 3.0e-06 56.2 140 28.6
Dinv24450 Davidia involucrata HOM05D000007 ORTHO05D000039 3.0e-06 56.2 115 34.8
Manes.09G122100 Manihot esculenta HOM05D000007 ORTHO05D000039 3.0e-06 56.2 134 29.9
QL03p024057 Quercus lobata HOM05D000007 ORTHO05D000039 3.0e-06 56.2 162 25.9
QL07p009445 Quercus lobata HOM05D000007 ORTHO05D337532 3.0e-06 56.2 77 44.2
RcHm_v2.0_Chr3g0456241 Rosa chinensis HOM05D000007 ORTHO05D000039 3.0e-06 56.2 149 26.2
CAN.G212.10 Capsicum annuum HOM05D000007 ORTHO05D000039 5.0e-06 55.5 104 33.7
CiPaw.15G116800 Carya illinoinensis HOM05D000007 ORTHO05D000039 5.0e-06 55.5 133 27.1
Nn8g40111 Nelumbo nucifera HOM05D000007 ORTHO05D000017 5.0e-06 55.5 126 28.6
QL04p036333 Quercus lobata HOM05D000007 ORTHO05D000039 5.0e-06 55.5 141 34.0
QL06p045009 Quercus lobata HOM05D000007 ORTHO05D000039 5.0e-06 55.5 51 54.9
Cfa007545 Carpinus fangiana HOM05D000007 ORTHO05D000039 6.6e-06 55.1 110 30.9
CiPaw.15G117000 Carya illinoinensis HOM05D000007 ORTHO05D000039 6.6e-06 55.1 137 27.0
Duzib147G0121 Durio zibethinus HOM05D000007 ORTHO05D000039 6.6e-06 55.1 131 31.3
Gorai.012G050800 Gossypium raimondii HOM05D000007 ORTHO05D000039 6.6e-06 55.1 111 29.7
Oeu052874.1 Olea europaea HOM05D000007 ORTHO05D000017 6.6e-06 55.1 112 31.2
QL04p036929 Quercus lobata HOM05D000007 ORTHO05D000039 6.6e-06 55.1 141 32.6
Sabra11G0105700 Salix brachista HOM05D000007 ORTHO05D000039 6.6e-06 55.1 148 30.4
Actinidia03637 Actinidia chinensis HOM05D000007 ORTHO05D000039 8.6e-06 54.7 137 30.7
Hma1.2p1_3211F.1_g333990 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 8.6e-06 54.7 113 30.1
QL03p014472 Quercus lobata HOM05D000007 ORTHO05D000039 8.6e-06 54.7 140 28.6
QL04p036868 Quercus lobata HOM05D000007 ORTHO05D000039 8.6e-06 54.7 140 32.9
QL11p050435 Quercus lobata HOM05D000007 ORTHO05D000039 8.6e-06 54.7 131 34.4


User provided reference genes

Program Settings