Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p036660 Quercus lobata HOM05D006768 ORTHO05D008436 2.0e-42 175.6 106 100.0
ClCG08G005390 Citrullus lanatus HOM05D006768 ORTHO05D008436 9.8e-34 146.7 106 67.9
MELO3C011580.2 Cucumis melo HOM05D006768 ORTHO05D008436 9.8e-34 146.7 106 67.9
Manes.02G160800 Manihot esculenta HOM05D006768 ORTHO05D008436 9.8e-34 146.7 106 68.9
Manes.18G074850 Manihot esculenta HOM05D006768 ORTHO05D008436 9.8e-34 146.7 106 68.9
Duzib116G0009 Durio zibethinus HOM05D006768 ORTHO05D008436 1.7e-33 146.0 106 67.9
CiPaw.06G026900 Carya illinoinensis HOM05D006768 ORTHO05D008436 2.2e-33 145.6 107 78.5
Cc10_g11060 Coffea canephora HOM05D006768 ORTHO05D008436 3.7e-33 144.8 100 78.0
Thecc.08G120600 Theobroma cacao HOM05D006768 ORTHO05D008436 6.4e-33 144.1 107 70.1
Duzib041G0323 Durio zibethinus HOM05D006768 ORTHO05D008436 8.3e-33 143.7 107 71.0
Psat2g079320 Pisum sativum HOM05D006768 ORTHO05D008436 8.3e-33 143.7 107 77.6
Gohir.D02G081200 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.1e-32 143.3 107 68.2
Potri.005G174700 Populus trichocarpa HOM05D006768 ORTHO05D008436 1.1e-32 143.3 111 67.6
Solyc11g013100.2 Solanum lycopersicum HOM05D006768 ORTHO05D008436 1.1e-32 143.3 106 65.1
Sopen11g008160 Solanum pennellii HOM05D006768 ORTHO05D008436 1.1e-32 143.3 106 65.1
Gorai.005G090800 Gossypium raimondii HOM05D006768 ORTHO05D008436 1.8e-32 142.5 106 67.9
Nitab4.5_0010364g0020 Nicotiana tabacum HOM05D006768 ORTHO05D008436 2.4e-32 142.1 106 66.0
Potri.002G086600 Populus trichocarpa HOM05D006768 ORTHO05D008436 2.4e-32 142.1 111 67.6
CSS0001196 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 5.4e-32 141.0 107 73.8
COL.COLO4_38328 Corchorus olitorius HOM05D006768 ORTHO05D008436 9.2e-32 140.2 107 68.2
Gohir.A02G074000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 9.2e-32 140.2 107 71.0
Gohir.D05G235400 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.2e-31 139.8 107 65.4
unitig_21.g20584 Utricularia gibba HOM05D006768 ORTHO05D008436 2.7e-31 138.7 106 72.6
CAN.G342.8 Capsicum annuum HOM05D006768 ORTHO05D008436 4.6e-31 137.9 106 65.1
Gohir.A05G233000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 4.6e-31 137.9 107 67.3
Sed0001868 Sechium edule HOM05D006768 ORTHO05D008436 5.9e-31 137.5 106 64.2
Hma1.2p1_0009F.1_g006320 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 7.8e-31 137.1 109 64.2
TPR.G8510 Trifolium pratense HOM05D006768 ORTHO05D008436 1.3e-30 136.3 108 75.9
CAN.G2.37 Capsicum annuum HOM05D006768 ORTHO05D008436 2.3e-30 135.6 106 64.2
CsaV3_6G003570 Cucumis sativus L. HOM05D006768 ORTHO05D008436 2.3e-30 135.6 100 68.0
Aqoxy6G00156 Aquilegia oxysepala HOM05D006768 ORTHO05D008436 3.9e-30 134.8 106 64.2
Cpa.g.sc36.24 Carica papaya HOM05D006768 ORTHO05D008436 3.9e-30 134.8 108 65.7
EL10Ac1g00013 Beta vulgaris HOM05D006768 ORTHO05D008436 5.0e-30 134.4 107 63.6
FvH4_2g26460 Fragaria vesca HOM05D006768 ORTHO05D008436 5.0e-30 134.4 106 72.6
RcHm_v2.0_Chr6g0295131 Rosa chinensis HOM05D006768 ORTHO05D008436 5.0e-30 134.4 106 72.6
Lsat_1_v5_gn_4_25061 Lactuca sativa HOM05D006768 ORTHO05D008436 6.6e-30 134.0 106 70.8
arahy.Tifrunner.gnm1.ann1.BFT67J Arachis hypogaea HOM05D006768 ORTHO05D008436 8.6e-30 133.7 111 70.3
arahy.Tifrunner.gnm1.ann1.V4QE5E Arachis hypogaea HOM05D006768 ORTHO05D008436 8.6e-30 133.7 111 70.3
PGSC0003DMG400014092 Solanum tuberosum HOM05D006768 ORTHO05D008436 8.6e-30 133.7 111 61.3
AUR62004718 Chenopodium quinoa HOM05D006768 ORTHO05D008436 1.1e-29 133.3 107 70.1
Atru.chr13.1393 Acer truncatum HOM05D006768 ORTHO05D008436 2.5e-29 132.1 104 73.1
Migut.C01157 Erythranthe guttata HOM05D006768 ORTHO05D008436 2.5e-29 132.1 107 69.2
FAN24G3387 Fragaria x ananassa HOM05D006768 ORTHO05D008436 2.5e-29 132.1 106 71.7
CSS0006116 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 5.6e-29 131.0 106 62.3
PGR044G1209 Punica granatum HOM05D006768 ORTHO05D008436 7.3e-29 130.6 118 60.2
Prupe.1G502600 Prunus persica HOM05D006768 ORTHO05D008436 1.2e-28 129.8 106 70.8
TAR625G0411 Trochodendron aralioides HOM05D006768 ORTHO05D008436 1.2e-28 129.8 106 65.1
Nitab4.5_0005357g0030 Nicotiana tabacum HOM05D006768 ORTHO05D008436 2.1e-28 129.0 100 64.0
MSTRG.25394 Avicennia marina HOM05D006768 ORTHO05D008436 2.8e-28 128.6 119 58.0
Thhalv10029535m.g Eutrema salsugineum HOM05D006768 ORTHO05D008436 4.7e-28 127.9 107 69.2
HanXRQChr08g0223691 Helianthus annuus HOM05D006768 ORTHO05D008436 1.0e-27 126.7 107 63.6
Hma1.2p1_0073F.1_g038410 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 1.0e-27 126.7 106 66.0
THA.LOC104817125 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 1.0e-27 126.7 108 71.3
CANSAT25G0473 Cannabis sativa HOM05D006768 ORTHO05D008436 1.4e-27 126.3 111 72.1
ECA234G1078 Erigeron canadensis HOM05D006768 ORTHO05D008436 1.4e-27 126.3 108 68.5
Sabra02G0068000 Salix brachista HOM05D006768 ORTHO05D008436 1.4e-27 126.3 106 64.2
SalBow7G0914 Salvia bowleyana HOM05D006768 ORTHO05D008436 1.4e-27 126.3 105 61.0
SalBow7G4665 Salvia bowleyana HOM05D006768 ORTHO05D008436 1.4e-27 126.3 105 61.0
Ciclev10002911m.g Citrus clementina HOM05D006768 ORTHO05D008436 1.8e-27 125.9 107 59.8
Glyma.13G082200 Glycine max HOM05D006768 ORTHO05D008436 3.1e-27 125.2 110 73.6
FAN15G1404 Fragaria x ananassa HOM05D006768 ORTHO05D008436 4.0e-27 124.8 101 72.3
Gorai.009G243700 Gossypium raimondii HOM05D006768 ORTHO05D008436 5.2e-27 124.4 102 60.8
ECA233G5727 Erigeron canadensis HOM05D006768 ORTHO05D008436 6.8e-27 124.0 106 65.1
Haze_00489 Corylus avellana HOM05D006768 ORTHO05D008436 1.2e-26 123.2 84 73.8
Lj1g0025240 Lotus japonicus HOM05D006768 ORTHO05D008436 1.2e-26 123.2 113 69.0
Lalb_Chr04g0253331 Lupinus albus HOM05D006768 ORTHO05D008436 1.2e-26 123.2 112 69.6
vmacro00812 Vaccinium macrocarpon HOM05D006768 ORTHO05D008436 1.2e-26 123.2 107 62.6
BcaB01g02871 Brassica carinata HOM05D006768 ORTHO05D008436 2.6e-26 122.1 107 65.4
Glyma.14G163200 Glycine max HOM05D006768 ORTHO05D008436 3.4e-26 121.7 110 70.0
TWI56G0584 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 3.4e-26 121.7 121 55.4
RhsimUnG0095400 Rhododendron simsii HOM05D006768 ORTHO05D008436 5.8e-26 120.9 99 67.7
GSVIVG01008909001 Vitis vinifera HOM05D006768 ORTHO05D008436 5.8e-26 120.9 127 55.9
HanXRQChr16g0527071 Helianthus annuus HOM05D006768 ORTHO05D008436 7.5e-26 120.6 106 64.2
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 7.5e-26 120.6 86 69.8
MD08G1168400 Malus domestica HOM05D006768 ORTHO05D008436 9.8e-26 120.2 105 67.6
Medtr5g059100 Medicago truncatula HOM05D006768 ORTHO05D008436 9.8e-26 120.2 107 72.0
Dinv27347 Davidia involucrata HOM05D006768 ORTHO05D008436 1.7e-25 119.4 99 62.6
Sp6g09840 Schrenkiella parvula HOM05D006768 ORTHO05D008436 1.7e-25 119.4 114 65.8
BcaC01g04777 Brassica carinata HOM05D006768 ORTHO05D008436 2.2e-25 119.0 112 66.1
BolC3t15699H Brassica oleracea HOM05D006768 ORTHO05D008436 2.2e-25 119.0 112 66.1
Phvul.008G165800 Phaseolus vulgaris HOM05D006768 ORTHO05D008436 2.2e-25 119.0 113 63.7
BraA03t12013Z Brassica rapa HOM05D006768 ORTHO05D008436 2.9e-25 118.6 113 65.5
TWI12G0503 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 2.9e-25 118.6 109 68.8
Sc23g0000800 Simmondsia chinensis HOM05D006768 ORTHO05D008436 3.7e-25 118.2 86 75.6
Hund27041 Selenicereus undatus HOM05D006768 ORTHO05D008436 4.9e-25 117.9 109 63.3
CARHR259330 Cardamine hirsuta HOM05D006768 ORTHO05D008436 8.3e-25 117.1 110 64.5
MBI06_g02573_MAGBIO Magnolia biondii HOM05D006768 ORTHO05D008436 5.4e-24 114.4 99 63.6
PSO170G4432 Papaver somniferum HOM05D006768 ORTHO05D008436 7.0e-24 114.0 107 64.5
PSO528G0064 Papaver somniferum HOM05D006768 ORTHO05D008436 7.0e-24 114.0 107 64.5
AL6G41870 Arabidopsis lyrata HOM05D006768 ORTHO05D008436 1.2e-23 113.2 111 69.4
THA.LOC104806813 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 1.2e-23 113.2 108 69.4
CDE04G1345 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 6.0e-23 110.9 106 58.5
A03p28000 Brassica napus HOM05D006768 ORTHO05D008436 1.0e-22 110.2 106 66.0
C03p33820 Brassica napus HOM05D006768 ORTHO05D008436 1.0e-22 110.2 106 66.0
Sabra05G0131800 Salix brachista HOM05D006768 ORTHO05D008436 1.7e-22 109.4 80 67.5
AT4G08230 Arabidopsis thaliana HOM05D006768 ORTHO05D008436 6.6e-22 107.5 113 61.1
VMungo0647G1658 Vigna mungo HOM05D006768 ORTHO05D008436 6.6e-22 107.5 106 64.2
Carub.0006s2676 Capsella rubella HOM05D006768 ORTHO05D008436 1.9e-21 105.9 113 65.5
Eucgr.F04346 Eucalyptus grandis HOM05D006768 ORTHO05D008436 2.5e-21 105.5 85 63.5
SGA_v2.0_scaffold24G10479 Striga asiatica HOM05D006768 ORTHO05D008436 7.3e-21 104.0 106 50.9
HPP92_011177 Vanilla planifolia HOM05D006768 ORTHO05D008436 9.5e-21 103.6 107 61.7
Os03g0263700 Oryza sativa ssp. japonica HOM05D006768 ORTHO05D008436 2.1e-20 102.4 113 63.7
CDE08G1444 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 3.6e-20 101.7 110 61.8
SEGI_37020 Sequoiadendron giganteum HOM05D006768 ORTHO05D008436 6.2e-20 100.9 106 57.5
Zm00001eb398080 Zea mays HOM05D006768 ORTHO05D008436 1.1e-19 100.1 117 58.1
CSS0018251 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 1.4e-19 99.8 86 65.1
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 1.4e-19 99.8 94 66.0
Zm00001eb011610 Zea mays HOM05D006768 ORTHO05D008436 1.8e-19 99.4 116 59.5
FAN27G1871 Fragaria x ananassa HOM05D000048 ORTHO05D004674 2.6e-18 95.5 78 73.1
Aa31LG9G14330 Aethionema arabicum HOM05D006768 ORTHO05D008436 8.6e-14 80.5 55 69.1
Peaxi162Scf00000g61010 Petunia axillaris HOM05D006768 ORTHO05D008436 5.6e-13 77.8 68 60.3
Nitab4.5_0001142g0120 Nicotiana tabacum HOM05D006768 ORTHO05D008436 3.6e-12 75.1 99 44.4
AUR62023633 Chenopodium quinoa HOM05D006768 ORTHO05D008436 3.1e-11 72.0 69 66.7
Ca_28007_v3 Cicer arietinum L. HOM05D006768 ORTHO05D008436 3.1e-11 72.0 81 70.4
AagrBONN_evm.TU.Sc2ySwM_344.1603 Anthoceros agrestis HOM05D006768 ORTHO05D008436 2.6e-10 68.9 62 51.6
Sabra05G0131600 Salix brachista HOM05D006768 ORTHO05D008436 1.7e-09 66.2 62 58.1
Mapoly0043s0020 Marchantia polymorpha HOM05D006768 ORTHO05D008436 3.5e-07 58.5 119 45.4
Pp3c13_12030 Physcomitrium patens HOM05D006768 ORTHO05D008436 1.3e-06 56.6 106 40.6


User provided reference genes

Program Settings