Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p036189 Quercus lobata HOM05D005652 ORTHO05D007300 2.5e-101 372.1 182 100.0
Peaxi162Scf00408g00839 Petunia axillaris HOM05D005652 ORTHO05D007300 4.1e-32 142.1 182 50.0
TWI12G1472 Tripterygium wilfordii HOM05D005652 ORTHO05D007300 2.7e-31 139.4 179 49.7
Dinv27358 Davidia involucrata HOM05D005652 ORTHO05D007300 4.6e-31 138.7 181 49.2
Potri.002G087200 Populus trichocarpa HOM05D005652 ORTHO05D007300 7.8e-31 137.9 179 49.2
Sabra02G0068700 Salix brachista HOM05D005652 ORTHO05D007300 7.8e-31 137.9 179 49.2
Oeu026729.1 Olea europaea HOM05D005652 ORTHO05D007300 1.3e-30 137.1 78 89.7
TWI56G0667 Tripterygium wilfordii HOM05D005652 ORTHO05D007300 1.3e-30 137.1 179 49.2
Nitab4.5_0000030g0080 Nicotiana tabacum HOM05D005652 ORTHO05D007300 1.7e-30 136.7 185 49.2
arahy.Tifrunner.gnm1.ann1.AJPJ4J Arachis hypogaea HOM05D005652 ORTHO05D007300 2.3e-30 136.3 178 48.9
CiPaw.05G226800 Carya illinoinensis HOM05D005652 ORTHO05D007300 2.3e-30 136.3 179 48.6
Solyc08g075780.4 Solanum lycopersicum HOM05D005652 ORTHO05D007300 2.3e-30 136.3 186 48.9
Solyc12g096120.2 Solanum lycopersicum HOM05D005652 ORTHO05D007300 2.3e-30 136.3 178 48.9
Sopen12g032000 Solanum pennellii HOM05D005652 ORTHO05D007300 2.3e-30 136.3 178 48.9
PGSC0003DMG400029291 Solanum tuberosum HOM05D005652 ORTHO05D007300 2.3e-30 136.3 178 48.9
ClCG03G009400 Citrullus lanatus HOM05D005652 ORTHO05D007300 3.0e-30 136.0 180 48.3
MELO3C003038.2 Cucumis melo HOM05D005652 ORTHO05D007300 3.0e-30 136.0 180 48.3
CsaV3_5G023210 Cucumis sativus L. HOM05D005652 ORTHO05D007300 3.0e-30 136.0 180 48.3
SalBow7G3105 Salvia bowleyana HOM05D005652 ORTHO05D007300 3.0e-30 136.0 179 48.0
Sed0000902 Sechium edule HOM05D005652 ORTHO05D007300 3.0e-30 136.0 180 48.3
Manes.18G074500 Manihot esculenta HOM05D005652 ORTHO05D007300 5.1e-30 135.2 178 48.3
PGSC0003DMG400030853 Solanum tuberosum HOM05D005652 ORTHO05D007300 5.1e-30 135.2 180 48.3
Cc06_g19090 Coffea canephora HOM05D005652 ORTHO05D007300 6.6e-30 134.8 180 49.4
Nitab4.5_0000943g0120 Nicotiana tabacum HOM05D005652 ORTHO05D007300 6.6e-30 134.8 180 49.4
HanXRQChr14g0432351 Helianthus annuus HOM05D005652 ORTHO05D007300 8.6e-30 134.4 179 48.0
Potri.005G173800 Populus trichocarpa HOM05D005652 ORTHO05D007300 8.6e-30 134.4 68 98.5
arahy.Tifrunner.gnm1.ann1.KZ1VTZ Arachis hypogaea HOM05D005652 ORTHO05D007300 1.1e-29 134.0 178 48.3
Hma1.2p1_0009F.1_g006210 Hydrangea macrophylla HOM05D005652 ORTHO05D007300 1.1e-29 134.0 178 48.3
Medtr5g059210 Medicago truncatula HOM05D005652 ORTHO05D007300 1.1e-29 134.0 178 48.3
Psat2g096080 Pisum sativum HOM05D005652 ORTHO05D007300 1.1e-29 134.0 178 48.3
Hund16832 Selenicereus undatus HOM05D005652 ORTHO05D007300 1.1e-29 134.0 176 48.3
CSS0012578 Camellia sinensis var. sinensis HOM05D005652 ORTHO05D007300 1.5e-29 133.7 176 48.9
CANSAT54G2625 Cannabis sativa HOM05D005652 ORTHO05D007300 1.5e-29 133.7 176 48.9
Migut.N03303 Erythranthe guttata HOM05D005652 ORTHO05D007300 1.5e-29 133.7 184 47.8
Lalb_Chr08g0241571 Lupinus albus HOM05D005652 ORTHO05D007300 1.5e-29 133.7 176 48.9
Lalb_Chr23g0270881 Lupinus albus HOM05D005652 ORTHO05D007300 1.5e-29 133.7 176 48.9
MBI09_g06382_MAGBIO Magnolia biondii HOM05D005652 ORTHO05D007300 1.9e-29 133.3 177 48.0
Nitab4.5_0013867g0020 Nicotiana tabacum HOM05D005652 ORTHO05D007300 1.9e-29 133.3 181 47.5
Nitab4.5_0014082g0020 Nicotiana tabacum HOM05D005652 ORTHO05D007300 1.9e-29 133.3 184 48.4
Oeu050252.1 Olea europaea HOM05D005652 ORTHO05D007300 1.9e-29 133.3 181 48.6
Oeu050889.1 Olea europaea HOM05D005652 ORTHO05D007300 2.5e-29 132.9 178 47.8
Peaxi162Scf00876g00433 Petunia axillaris HOM05D005652 ORTHO05D007300 2.5e-29 132.9 183 48.6
TPR.G8501 Trifolium pratense HOM05D005652 ORTHO05D007300 2.5e-29 132.9 178 47.8
MSTRG.22423 Avicennia marina HOM05D005652 ORTHO05D007300 3.3e-29 132.5 71 97.2
unitig_37.g12684 Utricularia gibba HOM05D005652 ORTHO05D007300 3.3e-29 132.5 176 48.3
Glyma.04G252400 Glycine max HOM05D005652 ORTHO05D007300 4.3e-29 132.1 175 48.6
Glyma.06G110100 Glycine max HOM05D005652 ORTHO05D007300 4.3e-29 132.1 175 48.6
MD08G1169400 Malus domestica HOM05D005652 ORTHO05D007300 4.3e-29 132.1 175 48.6
MD15G1356000 Malus domestica HOM05D005652 ORTHO05D007300 4.3e-29 132.1 175 48.6
Phvul.009G121900 Phaseolus vulgaris HOM05D005652 ORTHO05D007300 4.3e-29 132.1 175 48.6
RcHm_v2.0_Chr6g0294951 Rosa chinensis HOM05D005652 ORTHO05D007300 4.3e-29 132.1 175 48.6
Sc23g0000830 Simmondsia chinensis HOM05D005652 ORTHO05D007300 4.3e-29 132.1 181 46.4
Atru.chr13.1343 Acer truncatum HOM05D005652 ORTHO05D007300 5.6e-29 131.7 177 48.0
AL2G37930 Arabidopsis lyrata HOM05D005652 ORTHO05D007300 5.6e-29 131.7 178 46.6
Lj1g0016776 Lotus japonicus HOM05D005652 ORTHO05D007300 5.6e-29 131.7 177 48.0
PGR042G1865 Punica granatum HOM05D005652 ORTHO05D007300 5.6e-29 131.7 68 97.1
Ca_19025_v3 Cicer arietinum L. HOM05D005652 ORTHO05D007300 7.3e-29 131.3 175 48.6
Ca_26775_v3 Cicer arietinum L. HOM05D005652 ORTHO05D007300 7.3e-29 131.3 175 48.6
Ciclev10002945m.g Citrus clementina HOM05D005652 ORTHO05D007300 7.3e-29 131.3 175 48.6
Prupe.1G503300 Prunus persica HOM05D005652 ORTHO05D007300 9.6e-29 131.0 175 48.0
BcaB05g25069 Brassica carinata HOM05D005652 ORTHO05D007300 1.2e-28 130.6 176 47.2
ATR0041G005 Amborella trichopoda HOM05D005652 ORTHO05D007300 1.6e-28 130.2 175 48.0
FvH4_2g26390 Fragaria vesca HOM05D005652 ORTHO05D007300 1.6e-28 130.2 65 100.0
FAN20G1151 Fragaria x ananassa HOM05D005652 ORTHO05D007300 1.6e-28 130.2 65 100.0
FAN24G1202 Fragaria x ananassa HOM05D000102 ORTHO05D003793 1.6e-28 130.2 65 100.0
FAN27G1241 Fragaria x ananassa HOM05D005652 ORTHO05D007300 1.6e-28 130.2 65 100.0
THA.LOC104817112 Tarenaya hassleriana HOM05D005652 ORTHO05D007300 1.6e-28 130.2 175 48.0
TAR376G0464 Trochodendron aralioides HOM05D005652 ORTHO05D007300 1.6e-28 130.2 175 48.0
Duzib041G0199 Durio zibethinus HOM05D005652 ORTHO05D007300 2.1e-28 129.8 174 48.3
Duzib093G1773 Durio zibethinus HOM05D005652 ORTHO05D007300 2.1e-28 129.8 174 48.3
Glyma.14G163800 Glycine max HOM05D005652 ORTHO05D007300 2.1e-28 129.8 174 48.3
Gohir.A06G041900 Gossypium hirsutum HOM05D005652 ORTHO05D007300 2.1e-28 129.8 174 48.3
Gohir.D06G042900 Gossypium hirsutum HOM05D005652 ORTHO05D007300 2.1e-28 129.8 174 48.3
Gorai.005G091100 Gossypium raimondii HOM05D005652 ORTHO05D007300 2.1e-28 129.8 174 48.3
Gorai.010G048100 Gossypium raimondii HOM05D005652 ORTHO05D007300 2.1e-28 129.8 174 48.3
Nn5g28127 Nelumbo nucifera HOM05D005652 ORTHO05D007300 2.1e-28 129.8 174 48.3
Hund27043 Selenicereus undatus HOM05D005652 ORTHO05D007300 2.1e-28 129.8 65 98.5
THA.LOC104813142 Tarenaya hassleriana HOM05D005652 ORTHO05D007300 2.1e-28 129.8 174 48.3
Thecc.08G119900 Theobroma cacao HOM05D005652 ORTHO05D007300 2.1e-28 129.8 174 48.3
GSVIVG01008919001 Vitis vinifera HOM05D005652 ORTHO05D007300 2.1e-28 129.8 174 48.3
Aa31LG4G7830 Aethionema arabicum HOM05D005652 ORTHO05D007300 2.8e-28 129.4 177 46.3
EL10Ac1g00017 Beta vulgaris HOM05D005652 ORTHO05D007300 2.8e-28 129.4 183 47.0
CAN.G1483.5 Capsicum annuum HOM05D005652 ORTHO05D007300 2.8e-28 129.4 176 48.3
CARHR071220 Cardamine hirsuta HOM05D005652 ORTHO05D007300 2.8e-28 129.4 177 46.3
Sp5g32880 Schrenkiella parvula HOM05D005652 ORTHO05D007300 2.8e-28 129.4 177 46.3
ECA238G1260 Erigeron canadensis HOM05D005652 ORTHO05D007300 3.6e-28 129.0 70 95.7
PSO528G0083 Papaver somniferum HOM05D005652 ORTHO05D007300 3.6e-28 129.0 175 48.0
Ah.05g172270 Amaranthus hybridus HOM05D005652 ORTHO05D007300 4.7e-28 128.6 74 90.5
Aqoxy6G01736 Aquilegia oxysepala HOM05D005652 ORTHO05D007300 4.7e-28 128.6 174 47.7
AT1G77710 Arabidopsis thaliana HOM05D005652 ORTHO05D007300 6.2e-28 128.3 177 46.3
BcaB02g07127 Brassica carinata HOM05D005652 ORTHO05D007300 6.2e-28 128.3 175 46.9
BcaC03g15763 Brassica carinata HOM05D005652 ORTHO05D007300 6.2e-28 128.3 175 46.9
BcaC08g45458 Brassica carinata HOM05D005652 ORTHO05D007300 6.2e-28 128.3 175 46.9
A07p27870 Brassica napus HOM05D005652 ORTHO05D007300 6.2e-28 128.3 175 46.9
C06p30860 Brassica napus HOM05D005652 ORTHO05D007300 6.2e-28 128.3 175 46.9
BolC6t38248H Brassica oleracea HOM05D005652 ORTHO05D007300 6.2e-28 128.3 175 46.9
BraA07t30426Z Brassica rapa HOM05D005652 ORTHO05D007300 6.2e-28 128.3 175 46.9
Carub.0002s2459 Capsella rubella HOM05D005652 ORTHO05D007300 6.2e-28 128.3 175 46.9
CDE06G1598 Ceratophyllum demersum HOM05D005652 ORTHO05D007300 6.2e-28 128.3 64 100.0
CDE08G1473 Ceratophyllum demersum HOM05D005652 ORTHO05D007300 6.2e-28 128.3 64 100.0
Thhalv10019370m.g Eutrema salsugineum HOM05D005652 ORTHO05D007300 6.2e-28 128.3 177 45.8
Gohir.A02G074200 Gossypium hirsutum HOM05D005652 ORTHO05D007300 6.2e-28 128.3 64 100.0
Haze_00495 Corylus avellana HOM05D000102 ORTHO05D003793 8.1e-28 127.9 186 46.8
Zm00001eb140360 Zea mays HOM05D005652 ORTHO05D007300 8.1e-28 127.9 176 46.0
PSO170G5049 Papaver somniferum HOM05D005652 ORTHO05D007300 1.1e-27 127.5 174 47.7
MSTRG.1473 Avicennia marina HOM05D005652 ORTHO05D007300 1.8e-27 126.7 174 47.7
Gohir.D02G081400 Gossypium hirsutum HOM05D005652 ORTHO05D007300 2.4e-27 126.3 174 47.7
SalBow7G1395 Salvia bowleyana HOM05D005652 ORTHO05D007300 2.4e-27 126.3 73 90.4
Lsat_1_v5_gn_5_65281 Lactuca sativa HOM05D005652 ORTHO05D007300 3.1e-27 125.9 179 45.3
Eucgr.F03755 Eucalyptus grandis HOM05D005652 ORTHO05D007300 5.2e-27 125.2 172 47.7
Os01g0962400 Oryza sativa ssp. japonica HOM05D005652 ORTHO05D007300 6.9e-27 124.8 173 46.8
SGA_v2.0_scaffold24G10489 Striga asiatica HOM05D005652 ORTHO05D007300 1.2e-26 124.0 73 90.4
AagrBONN_evm.TU.Sc2ySwM_362.1619 Anthoceros agrestis HOM05D005652 ORTHO05D007300 2.0e-26 123.2 175 45.1
Migut.C01167 Erythranthe guttata HOM05D005652 ORTHO05D007300 2.0e-26 123.2 173 46.8
Mapoly0081s0039 Marchantia polymorpha HOM05D005652 ORTHO05D007300 2.0e-26 123.2 64 95.3
Pp3c6_16720 Physcomitrium patens HOM05D005652 ORTHO05D007300 2.0e-26 123.2 64 95.3
CBR_g44443 Chara braunii HOM05D005652 ORTHO05D007300 5.8e-26 121.7 175 44.6
SMO147G0269 Selaginella moellendorffii HOM05D005652 ORTHO05D007300 1.4e-24 117.1 66 87.9
HPP92_028057 Vanilla planifolia HOM05D005652 ORTHO05D007300 3.2e-24 115.9 78 80.8
FAN15G0151 Fragaria x ananassa HOM05D000102 ORTHO05D003793 1.2e-23 114.0 89 71.9
Actinidia02604 Actinidia chinensis HOM05D005652 ORTHO05D007300 4.6e-23 112.1 82 75.6
AUR62004713 Chenopodium quinoa HOM05D005652 ORTHO05D007300 8.7e-22 107.8 54 98.1
Cpa.g.sc36.14 Carica papaya HOM05D005652 ORTHO05D007300 3.3e-21 105.9 72 77.8
Oeu062544.1 Olea europaea HOM05D005652 ORTHO05D007300 5.6e-21 105.1 69 79.7
COL.COLO4_38344 Corchorus olitorius HOM05D005652 ORTHO05D007300 1.3e-20 104.0 52 100.0
Haze_27250 Corylus avellana HOM05D005652 ORTHO05D007300 9.0e-19 97.8 61 73.8
Actinidia13808 Actinidia chinensis HOM05D005652 ORTHO05D007300 1.7e-17 93.6 50 92.0
PRCOL_00001930 Prasinoderma coloniale HOM05D005652 ORTHO05D007300 8.4e-17 91.3 62 79.0
CAN.G947.38 Capsicum annuum HOM05D005652 ORTHO05D007300 1.4e-16 90.5 154 41.6
Rhsim11G0066600 Rhododendron simsii HOM05D005652 ORTHO05D007300 1.4e-16 90.5 154 41.6
AUR62023629 Chenopodium quinoa HOM05D000102 ORTHO05D003793 4.2e-16 89.0 44 100.0
Glyma.13G082800 Glycine max HOM05D005652 ORTHO05D007300 1.6e-15 87.0 155 40.0
AagrBONN_evm.TU.Sc2ySwM_344.240 Anthoceros agrestis HOM05D005652 ORTHO05D007300 4.0e-11 72.4 41 85.4
TAR381G0412 Trochodendron aralioides HOM05D000102 ORTHO05D003793 1.9e-08 63.5 32 96.9
BraA02t07181Z Brassica rapa HOM05D005652 ORTHO05D007300 2.4e-08 63.2 32 96.9
Actinidia03505 Actinidia chinensis HOM05D005652 ORTHO05D054027 2.7e-07 59.7 78 51.3
Sed0022236 Sechium edule HOM05D005652 ORTHO05D007300 4.6e-07 58.9 183 31.7
Dinv20715 Davidia involucrata HOM05D005652 ORTHO05D185765 6.0e-07 58.5 39 76.9
Actinidia34351 Actinidia chinensis HOM05D005652 ORTHO05D057191 8.7e-06 54.7 32 81.2


User provided reference genes

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