Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p034510 Quercus lobata HOM05D006622 ORTHO05D007939 6.8e-159 563.9 279 100.0
CiPaw.06G031300 Carya illinoinensis HOM05D006622 ORTHO05D007939 1.2e-126 456.8 275 81.1
Cfa016021 Carpinus fangiana HOM05D006622 ORTHO05D007939 4.4e-126 454.9 279 81.7
vmacro00835 Vaccinium macrocarpon HOM05D006622 ORTHO05D007939 5.8e-118 427.9 277 74.4
Haze_00437 Corylus avellana HOM05D006622 ORTHO05D007939 4.6e-115 418.3 348 63.8
TAR628G0332 Trochodendron aralioides HOM05D006622 ORTHO05D007939 4.6e-115 418.3 273 75.8
CSS0023480 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 1.0e-114 417.2 279 72.4
CSS0048522 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 1.0e-114 417.2 279 72.4
RhsimUnG0092500 Rhododendron simsii HOM05D006622 ORTHO05D007939 1.0e-114 417.2 277 73.3
Ciclev10001495m.g Citrus clementina HOM05D006622 ORTHO05D007939 2.3e-114 416.0 274 73.7
Prupe.1G495500 Prunus persica HOM05D006622 ORTHO05D007939 2.3e-114 416.0 277 73.6
Thecc.08G125800 Theobroma cacao HOM05D006622 ORTHO05D007939 3.9e-114 415.2 280 72.9
Dinv27309 Davidia involucrata HOM05D006622 ORTHO05D007939 1.1e-113 413.7 279 72.8
Atru.chr13.1464 Acer truncatum HOM05D006622 ORTHO05D007939 5.6e-113 411.4 271 73.1
Actinidia29467 Actinidia chinensis HOM05D006622 ORTHO05D007939 5.6e-113 411.4 279 71.7
Sabra05G0134700 Salix brachista HOM05D006622 ORTHO05D007939 9.6e-113 410.6 274 75.2
Potri.002G083300 Populus trichocarpa HOM05D006622 ORTHO05D007939 6.2e-112 407.9 274 73.4
MD15G1347700 Malus domestica HOM05D006622 ORTHO05D007939 1.8e-111 406.4 266 74.8
THA.LOC104800197 Tarenaya hassleriana HOM05D006622 ORTHO05D007939 3.1e-111 405.6 279 70.3
Potri.005G178200 Populus trichocarpa HOM05D006622 ORTHO05D007939 1.2e-110 403.7 274 74.1
Atru.chr13.1486 Acer truncatum HOM05D006622 ORTHO05D007939 4.5e-110 401.7 257 75.1
BcaB07g32178 Brassica carinata HOM05D006622 ORTHO05D007939 4.5e-110 401.7 273 70.3
Eucgr.F04350 Eucalyptus grandis HOM05D006622 ORTHO05D007939 4.5e-110 401.7 268 72.0
Duzib093G0047 Durio zibethinus HOM05D006622 ORTHO05D007939 5.8e-110 401.4 273 71.4
RcHm_v2.0_Chr6g0295871 Rosa chinensis HOM05D006622 ORTHO05D007939 5.8e-110 401.4 276 71.0
Aqoxy5G02345 Aquilegia oxysepala HOM05D006622 ORTHO05D007939 7.6e-110 401.0 268 71.6
CARHR022170 Cardamine hirsuta HOM05D006622 ORTHO05D007939 9.9e-110 400.6 265 72.5
Thhalv10008385m.g Eutrema salsugineum HOM05D006622 ORTHO05D007939 1.3e-109 400.2 273 70.0
TWI60G0608 Tripterygium wilfordii HOM05D006622 ORTHO05D007939 1.3e-109 400.2 278 72.7
PGR044G1562 Punica granatum HOM05D006622 ORTHO05D007939 1.7e-109 399.8 267 73.4
Aa31LG7G5770 Aethionema arabicum HOM05D006622 ORTHO05D007939 1.4e-108 396.7 274 69.7
Lj1g0017707 Lotus japonicus HOM05D006622 ORTHO05D007939 1.4e-108 396.7 268 73.5
Carub.0001s2125 Capsella rubella HOM05D006622 ORTHO05D007939 7.1e-108 394.4 273 70.3
AL1G34990 Arabidopsis lyrata HOM05D006622 ORTHO05D007939 9.3e-108 394.0 273 69.6
FAN15G0029 Fragaria x ananassa HOM05D006622 ORTHO05D007939 2.7e-107 392.5 258 74.0
FvH4_2g26990 Fragaria vesca HOM05D006622 ORTHO05D007939 6.0e-107 391.3 258 74.4
FAN24G2914 Fragaria x ananassa HOM05D006622 ORTHO05D007939 6.0e-107 391.3 258 74.4
AT1G21790 Arabidopsis thaliana HOM05D006622 ORTHO05D007939 7.9e-107 391.0 277 68.2
DCAR_003552 Daucus carota HOM05D006622 ORTHO05D007939 7.9e-107 391.0 272 70.6
Manes.18G077500 Manihot esculenta HOM05D006622 ORTHO05D007939 1.8e-106 389.8 274 72.6
Oeu040412.1 Olea europaea HOM05D006622 ORTHO05D007939 1.8e-106 389.8 274 69.0
Ca_16559_v3 Cicer arietinum L. HOM05D006622 ORTHO05D007939 2.3e-106 389.4 281 69.0
TPR.G21062 Trifolium pratense HOM05D006622 ORTHO05D007939 3.0e-106 389.0 266 70.3
GSVIVG01008863001 Vitis vinifera HOM05D006622 ORTHO05D007939 1.1e-105 387.1 253 73.9
C05p20800 Brassica napus HOM05D006622 ORTHO05D007939 1.5e-105 386.7 273 68.9
BolC5t30779H Brassica oleracea HOM05D006622 ORTHO05D007939 1.5e-105 386.7 273 68.9
BcaC05g26102 Brassica carinata HOM05D006622 ORTHO05D007939 2.5e-105 386.0 273 68.9
A06p17900 Brassica napus HOM05D006622 ORTHO05D007939 3.3e-105 385.6 273 70.0
BraA06t24880Z Brassica rapa HOM05D006622 ORTHO05D007939 3.3e-105 385.6 273 70.0
COL.COLO4_20860 Corchorus olitorius HOM05D006622 ORTHO05D007939 4.3e-105 385.2 298 66.1
Medtr3g088060 Medicago truncatula HOM05D006622 ORTHO05D007939 2.8e-104 382.5 276 67.8
Glyma.06G113400 Glycine max HOM05D006622 ORTHO05D007939 4.8e-104 381.7 268 72.8
VMungo1309G2133 Vigna mungo HOM05D006622 ORTHO05D007939 3.1e-103 379.0 279 68.8
Hund26807 Selenicereus undatus HOM05D006622 ORTHO05D007939 9.0e-103 377.5 277 69.0
MELO3C010612.2 Cucumis melo HOM05D006622 ORTHO05D007939 2.6e-102 375.9 279 65.9
MSTRG.24172 Avicennia marina HOM05D006622 ORTHO05D007939 4.5e-102 375.2 273 67.4
Phvul.009G125300 Phaseolus vulgaris HOM05D006622 ORTHO05D007939 4.5e-102 375.2 272 70.6
Gohir.D05G270800 Gossypium hirsutum HOM05D006622 ORTHO05D007939 1.3e-101 373.6 265 67.5
CsaV3_6G034460 Cucumis sativus L. HOM05D006622 ORTHO05D007939 2.9e-101 372.5 279 66.3
Glyma.04G249500 Glycine max HOM05D006622 ORTHO05D007939 3.8e-101 372.1 269 70.3
Gohir.A05G268900 Gossypium hirsutum HOM05D006622 ORTHO05D007939 4.9e-101 371.7 265 67.2
Lalb_Chr11g0065931 Lupinus albus HOM05D006622 ORTHO05D007939 4.9e-101 371.7 271 67.9
EL10Ac1g01019 Beta vulgaris HOM05D006622 ORTHO05D007939 8.4e-101 370.9 271 65.7
PSO017G0487 Papaver somniferum HOM05D006622 ORTHO05D007939 1.4e-100 370.2 268 68.7
PSO478G0228 Papaver somniferum HOM05D006622 ORTHO05D007939 1.4e-100 370.2 275 68.4
Gorai.009G283400 Gossypium raimondii HOM05D006622 ORTHO05D007939 5.5e-100 368.2 265 67.2
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea HOM05D006622 ORTHO05D007939 9.3e-100 367.5 286 64.3
CANSAT35G1811 Cannabis sativa HOM05D006622 ORTHO05D007939 3.5e-99 365.5 290 67.2
Migut.N03281 Erythranthe guttata HOM05D006622 ORTHO05D007939 4.6e-99 365.2 265 69.1
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea HOM05D006622 ORTHO05D007939 1.0e-98 364.0 272 66.2
ATR0584G160 Amborella trichopoda HOM05D006622 ORTHO05D007939 2.3e-98 362.8 272 66.9
CANSAT35G0359 Cannabis sativa HOM05D006622 ORTHO05D007939 2.3e-98 362.8 290 67.6
HanXRQChr09g0260611 Helianthus annuus HOM05D006622 ORTHO05D007939 1.1e-97 360.5 267 70.0
PGSC0003DMG400044436 Solanum tuberosum HOM05D006622 ORTHO05D007939 3.3e-97 359.0 279 65.9
PGSC0003DMG402008996 Solanum tuberosum HOM05D006622 ORTHO05D007939 3.3e-97 359.0 279 65.9
CAN.G69.14 Capsicum annuum HOM05D006622 ORTHO05D007939 9.6e-97 357.5 276 65.2
Cc10_g11940 Coffea canephora HOM05D006622 ORTHO05D007939 2.8e-96 355.9 264 67.8
Zm00001eb366620 Zea mays HOM05D006622 ORTHO05D007939 2.8e-96 355.9 258 68.6
Lsat_1_v5_gn_4_135580 Lactuca sativa HOM05D006622 ORTHO05D007939 1.1e-95 354.0 261 70.5
ECA232G1829 Erigeron canadensis HOM05D006622 ORTHO05D007939 1.8e-95 353.2 270 67.0
Zm00001eb146520 Zea mays HOM05D006622 ORTHO05D007939 5.3e-95 351.7 258 67.4
Solyc01g079770.2 Solanum lycopersicum HOM05D006622 ORTHO05D007939 4.5e-94 348.6 279 64.2
SGA_v2.0_scaffold24G10458 Striga asiatica HOM05D006622 ORTHO05D007939 7.6e-94 347.8 268 66.0
Sopen01g031530 Solanum pennellii HOM05D006622 ORTHO05D007939 1.4e-92 343.6 279 63.8
HPP92_013761 Vanilla planifolia HOM05D006622 ORTHO05D007939 2.1e-91 339.7 253 63.2
Os01g0869600 Oryza sativa ssp. japonica HOM05D006622 ORTHO05D007939 4.6e-91 338.6 258 65.9
Nitab4.5_0000630g0130 Nicotiana tabacum HOM05D006622 ORTHO05D007939 1.8e-90 336.7 278 62.6
Sc15g0002770 Simmondsia chinensis HOM05D006622 ORTHO05D007939 3.7e-88 328.9 273 61.2
AUR62014332 Chenopodium quinoa HOM05D006622 ORTHO05D007939 3.7e-80 302.4 265 59.2
AUR62019075 Chenopodium quinoa HOM05D006622 ORTHO05D007939 1.8e-74 283.5 193 69.4
FAN20G1317 Fragaria x ananassa HOM05D006622 ORTHO05D007939 1.7e-72 276.9 171 77.2
Sed0026599 Sechium edule HOM05D006622 ORTHO05D007939 3.7e-72 275.8 169 76.3
MD08G1162300 Malus domestica HOM05D006622 ORTHO05D007939 3.1e-71 272.7 178 73.0
Cpa.g.sc64.93 Carica papaya HOM05D006622 ORTHO05D007939 1.7e-69 266.9 176 74.4
ClCG08G005670 Citrullus lanatus HOM05D006622 ORTHO05D007939 1.0e-66 257.7 174 73.0
Oeu040413.1 Olea europaea HOM05D006622 ORTHO05D007939 9.7e-65 251.1 180 68.3
Mapoly0055s0084 Marchantia polymorpha HOM05D006622 ORTHO05D007939 1.2e-62 244.2 275 49.1
Psat5g087320 Pisum sativum HOM05D006622 ORTHO05D007939 1.5e-60 237.3 167 70.7
Peaxi162Scf01270g00111 Petunia axillaris HOM05D006622 ORTHO05D007939 2.7e-59 233.0 269 48.0
SMO351G0129 Selaginella moellendorffii HOM05D006622 ORTHO05D007939 6.7e-58 228.4 282 44.3
Sp1g19350 Schrenkiella parvula HOM05D006622 ORTHO05D007939 2.0e-57 226.9 135 74.1
CDE08G0135 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 9.7e-57 224.6 276 46.7
CDE06G0548 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 1.0e-53 214.5 157 65.0
Pp3c12_11900 Physcomitrium patens HOM05D006622 ORTHO05D007939 3.1e-47 193.0 273 44.0
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis HOM05D006622 ORTHO05D007939 3.5e-46 189.5 216 47.7
Nn5g28301 Nelumbo nucifera HOM05D006622 ORTHO05D007939 1.3e-45 187.6 261 42.1
Nitab4.5_0000968g0040 Nicotiana tabacum HOM05D006622 ORTHO05D007939 1.7e-40 170.6 278 41.4
PGSC0003DMG400007898 Solanum tuberosum HOM05D006622 ORTHO05D007939 3.0e-34 149.8 134 57.5
Lj7C341T13 Lonicera japonica HOM05D006622 ORTHO05D007939 7.3e-28 128.6 91 63.7
Actinidia03468 Actinidia chinensis HOM05D006622 ORTHO05D007939 2.8e-27 126.7 277 33.6
Aa31LG4G7650 Aethionema arabicum HOM05D006622 ORTHO05D007939 8.0e-27 125.2 78 73.1
CBR_g40088 Chara braunii HOM05D006622 ORTHO05D007939 4.9e-24 115.9 161 41.6
Prupe.1G512700 Prunus persica HOM05D006622 ORTHO05D007939 9.5e-20 101.7 76 65.8
AagrBONN_evm.TU.Sc2ySwM_117.972 Anthoceros agrestis HOM05D006622 ORTHO05D007939 2.6e-17 93.6 173 38.2
Lj7C341T14 Lonicera japonica HOM05D006622 ORTHO05D007939 1.3e-16 91.3 71 63.4
Aa31LG4G7660 Aethionema arabicum HOM05D006622 ORTHO05D007939 1.7e-16 90.9 65 61.5
AagrBONN_evm.TU.Sc2ySwM_117.993 Anthoceros agrestis HOM05D006622 ORTHO05D007939 2.1e-14 84.0 130 40.0
HPP92_013753 Vanilla planifolia HOM05D006622 ORTHO05D007939 1.7e-13 80.9 64 60.9
unitig_748.g7104 Utricularia gibba HOM05D006622 ORTHO05D007939 8.1e-11 72.0 82 46.3


User provided reference genes

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