Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p034466 Quercus lobata HOM05D007582 ORTHO05D009645 2.7e-63 245.0 110 100.0
MD15G1347500 Malus domestica HOM05D007582 ORTHO05D009645 2.4e-51 205.3 110 81.8
Prupe.1G495300 Prunus persica HOM05D007582 ORTHO05D009645 9.2e-51 203.4 111 81.1
CiPaw.05G221000 Carya illinoinensis HOM05D007582 ORTHO05D009645 5.9e-50 200.7 110 82.7
RcHm_v2.0_Chr6g0295891 Rosa chinensis HOM05D007582 ORTHO05D009645 2.9e-49 198.4 110 80.9
Haze_00435 Corylus avellana HOM05D007582 ORTHO05D009645 1.5e-48 196.1 110 78.2
FAN15G1067 Fragaria x ananassa HOM05D007582 ORTHO05D009645 7.3e-48 193.7 110 77.3
Manes.02G163800 Manihot esculenta HOM05D007582 ORTHO05D009645 5.8e-45 184.1 110 74.5
Thecc.08G126100 Theobroma cacao HOM05D007582 ORTHO05D009645 7.5e-45 183.7 111 73.9
Nn5g28305 Nelumbo nucifera HOM05D007582 ORTHO05D009645 9.8e-45 183.3 112 75.9
Manes.18G077606 Manihot esculenta HOM05D007582 ORTHO05D009645 1.7e-44 182.6 110 73.6
Potri.002G083100 Populus trichocarpa HOM05D007582 ORTHO05D009645 4.9e-44 181.0 113 72.6
TWI34G1919 Tripterygium wilfordii HOM05D007582 ORTHO05D009645 6.4e-44 180.6 111 74.8
Sc22g0004000 Simmondsia chinensis HOM05D007582 ORTHO05D009645 2.4e-43 178.7 110 71.8
Oeu028565.1 Olea europaea HOM05D007582 ORTHO05D009645 5.4e-43 177.6 112 70.5
TAR381G0802 Trochodendron aralioides HOM05D007582 ORTHO05D009645 5.4e-43 177.6 110 74.5
ClCG08G005690 Citrullus lanatus HOM05D007582 ORTHO05D009645 1.6e-42 176.0 112 69.6
Duzib116G0545 Durio zibethinus HOM05D007582 ORTHO05D009645 1.6e-42 176.0 110 71.8
Solyc06g060300.1 Solanum lycopersicum HOM05D007582 ORTHO05D009645 1.6e-42 176.0 110 71.8
Lalb_Chr17g0343701 Lupinus albus HOM05D007582 ORTHO05D009645 2.0e-42 175.6 110 70.9
Sopen06g020420 Solanum pennellii HOM05D007582 ORTHO05D009645 2.7e-42 175.3 110 71.8
CANSAT11G2348 Cannabis sativa HOM05D007582 ORTHO05D009645 4.6e-42 174.5 110 70.0
Lj1g0018777 Lotus japonicus HOM05D007582 ORTHO05D009645 7.8e-42 173.7 110 68.2
Nitab4.5_0003719g0010 Nicotiana tabacum HOM05D007582 ORTHO05D009645 7.8e-42 173.7 110 70.0
MELO3C010615.2 Cucumis melo HOM05D007582 ORTHO05D009645 1.7e-41 172.6 111 70.3
Atru.chr13.1488 Acer truncatum HOM05D007582 ORTHO05D009645 3.0e-41 171.8 110 70.0
CAN.G1040.1 Capsicum annuum HOM05D007582 ORTHO05D009645 3.0e-41 171.8 110 70.9
Cpa.g.sc64.90 Carica papaya HOM05D007582 ORTHO05D009645 5.0e-41 171.0 113 72.6
PGSC0003DMG400041136 Solanum tuberosum HOM05D007582 ORTHO05D009645 8.6e-41 170.2 110 70.9
MSTRG.22408 Avicennia marina HOM05D007582 ORTHO05D009645 1.9e-40 169.1 110 69.1
Medtr1g029990 Medicago truncatula HOM05D007582 ORTHO05D009645 1.9e-40 169.1 110 64.5
AL1G52300 Arabidopsis lyrata HOM05D007582 ORTHO05D009645 2.5e-40 168.7 110 70.0
CAN.G1040.3 Capsicum annuum HOM05D007582 ORTHO05D009645 2.5e-40 168.7 110 70.0
Nn1g00264 Nelumbo nucifera HOM05D007582 ORTHO05D009645 2.5e-40 168.7 111 69.4
AT1G44414 Arabidopsis thaliana HOM05D007582 ORTHO05D009645 3.3e-40 168.3 110 70.0
THA.LOC104817375 Tarenaya hassleriana HOM05D007582 ORTHO05D009645 3.3e-40 168.3 110 69.1
Aqoxy6G00171 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 5.6e-40 167.5 110 67.3
Ciclev10002916m.g Citrus clementina HOM05D007582 ORTHO05D009645 5.6e-40 167.5 110 67.3
TPR.G25776 Trifolium pratense HOM05D007582 ORTHO05D009645 7.3e-40 167.2 111 64.9
Migut.N03282 Erythranthe guttata HOM05D007582 ORTHO05D009645 1.2e-39 166.4 110 70.0
vmacro00836 Vaccinium macrocarpon HOM05D007582 ORTHO05D009645 1.2e-39 166.4 117 67.5
Carub.0001s3518 Capsella rubella HOM05D007582 ORTHO05D009645 1.6e-39 166.0 110 66.4
Dinv07214 Davidia involucrata HOM05D007582 ORTHO05D009645 2.1e-39 165.6 117 66.7
CSS0038396 Camellia sinensis var. sinensis HOM05D007582 ORTHO05D009645 2.8e-39 165.2 118 65.3
PGR042G2864 Punica granatum HOM05D007582 ORTHO05D009645 4.7e-39 164.5 111 71.2
BcaB07g33949 Brassica carinata HOM05D007582 ORTHO05D009645 6.2e-39 164.1 110 67.3
Sp1g33530 Schrenkiella parvula HOM05D007582 ORTHO05D009645 6.2e-39 164.1 110 69.1
RhsimUnG0092400 Rhododendron simsii HOM05D007582 ORTHO05D009645 1.1e-38 163.3 118 65.3
SGA_v2.0_scaffold28G11996 Striga asiatica HOM05D007582 ORTHO05D009645 2.3e-38 162.2 115 66.1
CARHR035920 Cardamine hirsuta HOM05D007582 ORTHO05D009645 3.1e-38 161.8 110 66.4
Thhalv10012348m.g Eutrema salsugineum HOM05D007582 ORTHO05D009645 3.1e-38 161.8 110 65.5
PSO170G1805 Papaver somniferum HOM05D007582 ORTHO05D009645 4.0e-38 161.4 110 66.4
Gohir.D06G045500 Gossypium hirsutum HOM05D007582 ORTHO05D009645 5.2e-38 161.0 101 70.3
SalBow6G5334 Salvia bowleyana HOM05D007582 ORTHO05D009645 5.2e-38 161.0 110 66.4
PSO528G0093 Papaver somniferum HOM05D007582 ORTHO05D009645 8.9e-38 160.2 110 66.4
Peaxi162Scf00051g00105 Petunia axillaris HOM05D007582 ORTHO05D009645 1.2e-37 159.8 107 69.2
BolC6t35199H Brassica oleracea HOM05D007582 ORTHO05D009645 2.0e-37 159.1 110 67.3
Aa31LG6G9350 Aethionema arabicum HOM05D007582 ORTHO05D009645 2.6e-37 158.7 110 66.4
Gorai.010G050500 Gossypium raimondii HOM05D007582 ORTHO05D009645 2.6e-37 158.7 101 69.3
Lj4P628T29 Lonicera japonica HOM05D007582 ORTHO05D009645 4.4e-37 157.9 110 68.2
Cc10_g11990 Coffea canephora HOM05D007582 ORTHO05D009645 9.8e-37 156.8 114 62.3
BcaC08g42847 Brassica carinata HOM05D007582 ORTHO05D009645 1.7e-36 156.0 110 66.4
A06p11790 Brassica napus HOM05D007582 ORTHO05D009645 1.7e-36 156.0 110 64.5
C06p00630 Brassica napus HOM05D007582 ORTHO05D009645 1.7e-36 156.0 110 66.4
CsaV3_6G034440 Cucumis sativus L. HOM05D007582 ORTHO05D009645 2.2e-36 155.6 102 67.6
DCAR_016167 Daucus carota HOM05D007582 ORTHO05D009645 2.2e-36 155.6 111 64.9
Glyma.14G150500 Glycine max HOM05D007582 ORTHO05D009645 2.2e-36 155.6 114 59.6
Aqoxy6G00227 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 2.9e-36 155.2 103 66.0
VMungo0647G1492 Vigna mungo HOM05D007582 ORTHO05D009645 3.7e-36 154.8 110 60.9
Hma1.2p1_0054F.1_g031010 Hydrangea macrophylla HOM05D007582 ORTHO05D009645 1.1e-35 153.3 111 65.8
HanXRQChr15g0465231 Helianthus annuus HOM05D007582 ORTHO05D009645 1.9e-35 152.5 110 62.7
CDE06G0523 Ceratophyllum demersum HOM05D007582 ORTHO05D009645 2.4e-35 152.1 111 59.5
ATR0584G060 Amborella trichopoda HOM05D007582 ORTHO05D009645 4.1e-35 151.4 113 61.9
SHI08583 Sapria himalayana HOM05D007582 ORTHO05D009645 1.6e-34 149.4 111 61.3
Phvul.008G160900 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 1.0e-33 146.7 110 59.1
Phvul.008G167875 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 1.0e-33 146.7 110 59.1
HPP92_006841 Vanilla planifolia HOM05D007582 ORTHO05D009645 1.7e-33 146.0 120 56.7
Sed0002225 Sechium edule HOM05D007582 ORTHO05D009645 3.0e-33 145.2 113 58.4
Gohir.A06G045000 Gossypium hirsutum HOM05D007582 ORTHO05D009645 1.2e-31 139.8 82 74.4
Zm00001eb348620 Zea mays HOM05D007582 ORTHO05D009645 2.8e-31 138.7 110 59.1
ECA233G1368 Erigeron canadensis HOM05D007582 ORTHO05D009645 6.2e-31 137.5 104 59.6
arahy.Tifrunner.gnm1.ann1.WSBZ3R Arachis hypogaea HOM05D007582 ORTHO05D009645 1.1e-30 136.7 99 65.7
Nn3g18690 Nelumbo nucifera HOM05D007582 ORTHO05D009645 5.2e-30 134.4 110 57.3
Psat6g041680 Pisum sativum HOM05D007582 ORTHO05D009139 6.8e-30 134.0 96 58.3
Os05g0435400 Oryza sativa ssp. japonica HOM05D007582 ORTHO05D009645 5.4e-27 124.4 112 57.1
SMO143G0209 Selaginella moellendorffii HOM05D007582 ORTHO05D009645 1.7e-25 119.4 110 47.3
Pp3c19_19360 Physcomitrium patens HOM05D007582 ORTHO05D009645 2.6e-21 105.5 119 42.0
Nn4g24512 Nelumbo nucifera HOM05D007582 ORTHO05D009645 3.4e-21 105.1 70 65.7
Nitab4.5_0011334g0030 Nicotiana tabacum HOM05D007582 ORTHO05D009645 8.4e-20 100.5 80 57.5
Mapoly0085s0071 Marchantia polymorpha HOM05D007582 ORTHO05D009645 1.3e-17 93.2 119 37.8
AagrBONN_evm.TU.Sc2ySwM_362.2461 Anthoceros agrestis HOM05D007582 ORTHO05D009645 1.1e-11 73.6 66 45.5
Aa31LG6G9370 Aethionema arabicum HOM05D007582 ORTHO05D009645 9.3e-11 70.5 110 40.0
AagrBONN_evm.TU.Sc2ySwM_362.1959 Anthoceros agrestis HOM05D007582 ORTHO05D009645 2.1e-10 69.3 67 49.3
Nn1g08790 Nelumbo nucifera HOM05D007582 ORTHO05D009645 7.8e-10 67.4 35 80.0
Aqoxy6G00222 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 2.3e-09 65.9 73 43.8
Phvul.L001669 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 3.6e-07 58.5 42 59.5


User provided reference genes

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