Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p034450 Quercus lobata HOM05D041415 ORTHO05D000038 1.4e-129 466.5 259 100.0
QL09p034431 Quercus lobata HOM05D041415 ORTHO05D000038 3.9e-100 368.6 183 97.3
Haze_00433 Corylus avellana HOM05D000082 ORTHO05D000038 9.4e-54 214.5 191 60.2
CsaV3_6G034420 Cucumis sativus L. HOM05D000082 ORTHO05D000038 4.2e-38 162.5 190 46.3
ClCG08G005710 Citrullus lanatus HOM05D000082 ORTHO05D000038 1.4e-36 157.5 190 45.8
Prupe.1G495200 Prunus persica HOM05D000082 ORTHO05D000038 1.1e-35 154.5 184 45.7
FvH4_2g27040 Fragaria vesca HOM05D000082 ORTHO05D000038 1.5e-35 154.1 186 43.0
FAN24G0679 Fragaria x ananassa HOM05D029497 ORTHO05D000038 1.5e-35 154.1 186 43.0
MELO3C010617.2 Cucumis melo HOM05D000082 ORTHO05D000038 2.0e-35 153.7 190 43.7
FAN20G2391 Fragaria x ananassa HOM05D029497 ORTHO05D000038 9.7e-35 151.4 186 43.0
RcHm_v2.0_Chr6g0295911 Rosa chinensis HOM05D000082 ORTHO05D000038 4.8e-34 149.1 186 43.0
MD08G1162100 Malus domestica HOM05D000082 ORTHO05D000038 1.2e-29 134.4 181 41.4
Sed0022808 Sechium edule HOM05D000082 ORTHO05D000038 2.6e-27 126.7 187 41.2
Sabra02G0065100 Salix brachista HOM05D041415 ORTHO05D000038 3.4e-27 126.3 188 40.4
Potri.002G083001 Populus trichocarpa HOM05D000082 ORTHO05D000038 4.8e-26 122.5 185 37.8
TWI34G1573 Tripterygium wilfordii HOM05D000082 ORTHO05D000038 4.1e-25 119.4 188 41.0
TWI60G0558 Tripterygium wilfordii HOM05D000082 ORTHO05D000038 5.0e-23 112.5 188 39.4
Manes.02G164000 Manihot esculenta HOM05D000082 ORTHO05D000038 4.0e-20 102.8 193 33.7
COL.COLO4_38223 Corchorus olitorius HOM05D000082 ORTHO05D000038 3.3e-14 83.2 190 32.1
Dinv07230 Davidia involucrata HOM05D000082 ORTHO05D000038 1.2e-13 81.3 153 36.6
Lalb_Chr11g0067361 Lupinus albus HOM05D000082 ORTHO05D000038 4.1e-09 66.2 128 33.6
Atru.chr1.108 Acer truncatum HOM05D000082 ORTHO05D000038 5.4e-09 65.9 69 46.4
Dinv00634 Davidia involucrata HOM05D000082 ORTHO05D000038 5.4e-09 65.9 190 29.5
Duzib114G0003 Durio zibethinus HOM05D000082 ORTHO05D000038 2.0e-08 63.9 120 37.5
Dinv03540 Davidia involucrata HOM05D000082 ORTHO05D000038 7.8e-08 62.0 175 33.1
Dinv40416 Davidia involucrata HOM05D000082 ORTHO05D000038 7.8e-08 62.0 190 28.9
COL.COLO4_29359 Corchorus olitorius HOM05D000082 ORTHO05D000038 6.6e-07 58.9 128 37.5
MBI18_g32094_MAGBIO Magnolia biondii HOM05D025173 ORTHO05D000038 6.6e-07 58.9 94 35.1
FvH4_1g17310 Fragaria vesca HOM05D000082 ORTHO05D000038 1.1e-06 58.2 194 26.8
Potri.007G107000 Populus trichocarpa HOM05D000082 ORTHO05D000038 1.5e-06 57.8 58 51.7
Cfa002019 Carpinus fangiana HOM05D002312 ORTHO05D000038 1.9e-06 57.4 128 32.8
FAN26G2829 Fragaria x ananassa HOM05D000082 ORTHO05D000038 1.9e-06 57.4 194 26.8
RhsimUnG0156200 Rhododendron simsii HOM05D000082 ORTHO05D000038 1.9e-06 57.4 232 25.9
Potri.007G118000 Populus trichocarpa HOM05D000082 ORTHO05D000038 5.6e-06 55.8 58 50.0


User provided reference genes

Program Settings