Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p034330 Quercus lobata HOM05D006879 ORTHO05D008452 1.0e-60 236.5 115 100.0
QL09p034374 Quercus lobata HOM05D006879 ORTHO05D008452 1.0e-60 236.5 115 100.0
Cfa016025 Carpinus fangiana HOM05D006879 ORTHO05D008452 4.0e-49 198.0 116 81.9
Haze_00431 Corylus avellana HOM05D000586 ORTHO05D008452 1.7e-47 192.6 101 89.1
CiPaw.06G031600 Carya illinoinensis HOM05D006879 ORTHO05D008452 3.8e-47 191.4 113 76.1
Thecc.08G126700 Theobroma cacao HOM05D006879 ORTHO05D008452 3.8e-47 191.4 107 82.2
FAN20G0093 Fragaria x ananassa HOM05D006879 ORTHO05D008452 5.4e-46 187.6 110 78.2
CSS0011792 Camellia sinensis var. sinensis HOM05D006879 ORTHO05D008452 1.6e-45 186.0 112 77.7
FvH4_2g27080 Fragaria vesca HOM05D006879 ORTHO05D008452 2.7e-45 185.3 110 76.4
Dinv07211 Davidia involucrata HOM05D006879 ORTHO05D008452 3.5e-45 184.9 106 80.2
Gohir.D01G180300 Gossypium hirsutum HOM05D006879 ORTHO05D008452 7.9e-45 183.7 109 78.9
FAN24G0949 Fragaria x ananassa HOM05D006879 ORTHO05D008452 1.0e-44 183.3 110 75.5
Gohir.A01G189200 Gossypium hirsutum HOM05D006879 ORTHO05D008452 2.3e-44 182.2 108 79.6
Eucgr.F03793 Eucalyptus grandis HOM05D006879 ORTHO05D008452 3.9e-44 181.4 114 74.6
Manes.02G164300 Manihot esculenta HOM05D006879 ORTHO05D008452 3.9e-44 181.4 109 74.3
Ciclev10002899m.g Citrus clementina HOM05D006879 ORTHO05D008452 5.1e-44 181.0 100 79.0
Duzib041G0788 Durio zibethinus HOM05D006879 ORTHO05D008452 6.6e-44 180.6 108 75.9
Dinv27305 Davidia involucrata HOM05D006879 ORTHO05D008452 8.7e-44 180.3 110 77.3
Gorai.002G222300 Gossypium raimondii HOM05D006879 ORTHO05D008452 5.6e-43 177.6 114 73.7
COL.COLO4_03398 Corchorus olitorius HOM05D006879 ORTHO05D008452 7.3e-43 177.2 118 72.0
Sc02g0005010 Simmondsia chinensis HOM05D006879 ORTHO05D008452 7.3e-43 177.2 108 75.9
MELO3C010476.2 Cucumis melo HOM05D006879 ORTHO05D008452 9.6e-43 176.8 115 72.2
Prupe.1G494800 Prunus persica HOM05D006879 ORTHO05D008452 2.1e-42 175.6 106 77.4
Sed0023358 Sechium edule HOM05D006879 ORTHO05D008452 2.1e-42 175.6 102 76.5
CsaV3_4G028290 Cucumis sativus L. HOM05D006879 ORTHO05D008452 2.8e-42 175.3 114 70.2
Aqoxy6G00233 Aquilegia oxysepala HOM05D006879 ORTHO05D008452 3.6e-42 174.9 103 75.7
HanXRQChr03g0088981 Helianthus annuus HOM05D006879 ORTHO05D008452 3.6e-42 174.9 108 77.8
Nn5g28321 Nelumbo nucifera HOM05D006879 ORTHO05D008452 4.8e-42 174.5 100 79.0
Lsat_1_v5_gn_6_93360 Lactuca sativa HOM05D006879 ORTHO05D008452 8.1e-42 173.7 106 75.5
PGR083G2398 Punica granatum HOM05D006879 ORTHO05D008452 1.4e-41 172.9 114 68.4
RcHm_v2.0_Chr6g0295961 Rosa chinensis HOM05D006879 ORTHO05D008452 1.4e-41 172.9 98 79.6
ClCG11G015720 Citrullus lanatus HOM05D006879 ORTHO05D008452 1.8e-41 172.6 127 64.6
Atru.chr13.1490 Acer truncatum HOM05D006879 ORTHO05D008452 2.4e-41 172.2 102 75.5
arahy.Tifrunner.gnm1.ann1.0SZ2NS Arachis hypogaea HOM05D006879 ORTHO05D008452 5.3e-41 171.0 107 73.8
arahy.Tifrunner.gnm1.ann1.61DA9N Arachis hypogaea HOM05D006879 ORTHO05D008452 5.3e-41 171.0 107 73.8
arahy.Tifrunner.gnm1.ann1.GV74HV Arachis hypogaea HOM05D006879 ORTHO05D008452 5.3e-41 171.0 107 73.8
Hma1.2p1_0054F.1_g031040 Hydrangea macrophylla HOM05D006879 ORTHO05D008452 6.9e-41 170.6 112 72.3
CDE07G0981 Ceratophyllum demersum HOM05D006879 ORTHO05D008452 9.0e-41 170.2 102 73.5
BcaB02g07111 Brassica carinata HOM05D006879 ORTHO05D008452 1.5e-40 169.5 114 72.8
Aa31LG4G7630 Aethionema arabicum HOM05D006879 ORTHO05D008452 2.0e-40 169.1 114 66.7
TAR628G0734 Trochodendron aralioides HOM05D006879 ORTHO05D008452 3.4e-40 168.3 95 78.9
Hund17297 Selenicereus undatus HOM05D006879 ORTHO05D008452 4.5e-40 167.9 98 78.6
Lj1g0005641 Lotus japonicus HOM05D006879 ORTHO05D008452 5.8e-40 167.5 99 74.7
AUR62014329 Chenopodium quinoa HOM05D006879 ORTHO05D008452 7.6e-40 167.2 114 68.4
Sp5g32720 Schrenkiella parvula HOM05D006879 ORTHO05D008452 7.6e-40 167.2 114 67.5
CAN.G21.5 Capsicum annuum HOM05D006879 ORTHO05D008452 9.9e-40 166.8 117 69.2
MD15G1347100 Malus domestica HOM05D006879 ORTHO05D008452 9.9e-40 166.8 117 70.1
Phvul.008G160300 Phaseolus vulgaris HOM05D006879 ORTHO05D008452 9.9e-40 166.8 113 69.0
Nitab4.5_0005583g0080 Nicotiana tabacum HOM05D006879 ORTHO05D008452 1.3e-39 166.4 105 74.3
Lalb_Chr11g0066061 Lupinus albus HOM05D006879 ORTHO05D008452 2.2e-39 165.6 116 69.0
Medtr3g088570 Medicago truncatula HOM05D006879 ORTHO05D008452 2.2e-39 165.6 102 74.5
Potri.005G178501 Populus trichocarpa HOM05D006879 ORTHO05D008452 2.2e-39 165.6 108 71.3
Nitab4.5_0004334g0040 Nicotiana tabacum HOM05D006879 ORTHO05D008452 2.9e-39 165.2 109 70.6
C06p31190 Brassica napus HOM05D006879 ORTHO05D008452 3.8e-39 164.9 114 68.4
ECA240G3722 Erigeron canadensis HOM05D006879 ORTHO05D008452 3.8e-39 164.9 108 70.4
BcaC08g45472 Brassica carinata HOM05D006879 ORTHO05D008452 4.9e-39 164.5 114 67.5
BolC6t38260H Brassica oleracea HOM05D006879 ORTHO05D008452 4.9e-39 164.5 114 67.5
FAN15G3590 Fragaria x ananassa HOM05D006879 ORTHO05D008452 4.9e-39 164.5 145 57.2
Solyc08g067800.3 Solanum lycopersicum HOM05D006879 ORTHO05D008452 4.9e-39 164.5 100 72.0
CANSAT56G2034 Cannabis sativa HOM05D006879 ORTHO05D008452 6.4e-39 164.1 113 69.9
Actinidia03466 Actinidia chinensis HOM05D006879 ORTHO05D008452 8.4e-39 163.7 112 67.0
BraA07t30441Z Brassica rapa HOM05D006879 ORTHO05D008452 8.4e-39 163.7 114 67.5
Sopen08g021740 Solanum pennellii HOM05D006879 ORTHO05D008452 8.4e-39 163.7 100 71.0
AL2G37750 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 1.1e-38 163.3 114 67.5
Thhalv10019334m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 1.9e-38 162.5 116 67.2
A07p27940 Brassica napus HOM05D006879 ORTHO05D008452 2.4e-38 162.2 114 66.7
Glyma.14G151700 Glycine max HOM05D006879 ORTHO05D008452 2.4e-38 162.2 107 69.2
VMungo0647G0471 Vigna mungo HOM05D006879 ORTHO05D008452 2.4e-38 162.2 110 69.1
AT1G77540 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 3.2e-38 161.8 114 65.8
Carub.0002s2444 Capsella rubella HOM05D006879 ORTHO05D008452 3.2e-38 161.8 100 75.0
TWI32G0821 Tripterygium wilfordii HOM05D006879 ORTHO05D008452 7.1e-38 160.6 91 81.3
AUR62019072 Chenopodium quinoa HOM05D006879 ORTHO05D008452 1.6e-37 159.5 111 65.8
Cc10_g12010 Coffea canephora HOM05D006879 ORTHO05D008452 2.1e-37 159.1 114 65.8
CARHR071070 Cardamine hirsuta HOM05D006879 ORTHO05D008452 3.5e-37 158.3 114 65.8
EL10Ac1g01022 Beta vulgaris HOM05D006879 ORTHO05D008452 7.9e-37 157.1 105 68.6
THA.LOC104813659 Tarenaya hassleriana HOM05D006879 ORTHO05D008452 7.9e-37 157.1 106 70.8
Psat5g086200 Pisum sativum HOM05D006879 ORTHO05D008452 1.0e-36 156.8 103 69.9
PSO528G0112 Papaver somniferum HOM05D006879 ORTHO05D008452 3.0e-36 155.2 114 62.3
Ca_28182_v3 Cicer arietinum L. HOM05D006879 ORTHO05D008452 3.9e-36 154.8 96 74.0
Aa31LG7G5750 Aethionema arabicum HOM05D006879 ORTHO05D008452 6.7e-36 154.1 105 67.6
BcaC05g26099 Brassica carinata HOM05D006879 ORTHO05D008452 1.1e-35 153.3 101 69.3
Migut.C01128 Erythranthe guttata HOM05D006879 ORTHO05D008452 1.9e-35 152.5 101 69.3
PSO170G0506 Papaver somniferum HOM05D006879 ORTHO05D008452 4.3e-35 151.4 114 63.2
ATR0584G146 Amborella trichopoda HOM05D006879 ORTHO05D008452 5.6e-35 151.0 94 71.3
AT1G21770 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 5.6e-35 151.0 100 68.0
BolC5t30777H Brassica oleracea HOM05D006879 ORTHO05D008452 5.6e-35 151.0 101 68.3
Sp1g19330 Schrenkiella parvula HOM05D006879 ORTHO05D008452 5.6e-35 151.0 103 68.0
Thhalv10009164m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 7.4e-35 150.6 103 68.0
AL1G34970 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 9.6e-35 150.2 100 67.0
BcaB07g32176 Brassica carinata HOM05D006879 ORTHO05D008452 1.3e-34 149.8 101 68.3
Carub.0001s2123 Capsella rubella HOM05D006879 ORTHO05D008452 1.3e-34 149.8 98 68.4
A06p17880 Brassica napus HOM05D006879 ORTHO05D008452 2.8e-34 148.7 101 68.3
BraA06t24878Z Brassica rapa HOM05D006879 ORTHO05D008452 2.8e-34 148.7 101 68.3
MSTRG.25382 Avicennia marina HOM05D006879 ORTHO05D008452 3.7e-34 148.3 102 69.6
C05p20780 Brassica napus HOM05D006879 ORTHO05D008452 4.0e-33 144.8 101 67.3
vmacro00838 Vaccinium macrocarpon HOM05D006879 ORTHO05D008452 1.0e-31 140.2 89 76.4
Cpa.g.sc418.6 Carica papaya HOM05D006879 ORTHO05D008452 3.8e-31 138.3 81 77.8
SGA_v2.0_scaffold52G18964 Striga asiatica HOM05D006879 ORTHO05D008452 3.8e-31 138.3 106 65.1
TPR.G20905 Trifolium pratense HOM05D006879 ORTHO05D008452 4.2e-30 134.8 80 78.8
RhsimUnG0092300 Rhododendron simsii HOM05D000586 ORTHO05D008452 2.7e-29 132.1 80 76.2
CAN.G21.4 Capsicum annuum HOM05D006879 ORTHO05D008452 4.6e-29 131.3 103 54.4
GSVIVG01008857001 Vitis vinifera HOM05D006879 ORTHO05D008452 1.1e-27 126.7 67 86.6
Oeu059437.1 Olea europaea HOM05D006879 ORTHO05D008452 4.8e-26 121.3 67 76.1
Ah.05g171050 Amaranthus hybridus HOM05D006879 ORTHO05D008452 1.8e-25 119.4 83 68.7
Pp3c12_9490 Physcomitrium patens HOM05D006879 ORTHO05D008452 8.4e-23 110.5 113 48.7
HanXRQChr01g0005251 Helianthus annuus HOM05D006879 ORTHO05D008452 2.5e-22 109.0 70 71.4
HanXRQChr04g0101301 Helianthus annuus HOM05D006879 ORTHO05D008452 4.2e-22 108.2 71 74.6
Peaxi162Scf00332g00015 Petunia axillaris HOM05D006879 ORTHO05D008452 1.6e-21 106.3 79 64.6
Mapoly0075s0062 Marchantia polymorpha HOM05D006879 ORTHO05D008452 6.1e-21 104.4 116 44.0
Zm00001eb082730 Zea mays HOM05D006879 ORTHO05D008452 3.9e-20 101.7 96 49.0
SEGI_19819 Sequoiadendron giganteum HOM05D006879 ORTHO05D008452 5.1e-20 101.3 85 58.8
SMO146G0286 Selaginella moellendorffii HOM05D006879 ORTHO05D008452 5.7e-19 97.8 92 45.7
Eucgr.H03927 Eucalyptus grandis HOM05D006879 ORTHO05D008452 3.1e-17 92.0 107 49.5
Os04g0431300 Oryza sativa ssp. japonica HOM05D006879 ORTHO05D008452 7.7e-16 87.4 62 58.1
AagrBONN_evm.TU.Sc2ySwM_117.2168 Anthoceros agrestis HOM05D006879 ORTHO05D008452 2.9e-15 85.5 98 42.9
Eucgr.H03925 Eucalyptus grandis HOM05D006879 ORTHO05D008452 2.9e-15 85.5 64 64.1
HanXRQChr09g0244451 Helianthus annuus HOM05D006879 ORTHO05D008452 3.6e-13 78.6 44 81.8
CBR_g36233 Chara braunii HOM05D006879 ORTHO05D008452 8.8e-12 73.9 62 50.0


User provided reference genes

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