Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p033712 Quercus lobata HOM05D000003 ORTHO05D000004 6.2e-60 233.8 108 100.0
QL01p005053 Quercus lobata HOM05D000003 ORTHO05D000004 1.3e-36 156.4 101 67.3
QL11p053175 Quercus lobata HOM05D000003 ORTHO05D000004 4.8e-36 154.5 107 61.7
QL08p017448 Quercus lobata HOM05D000003 ORTHO05D000004 3.9e-30 134.8 101 61.4
QL12p025805 Quercus lobata HOM05D000967 ORTHO05D000796 3.3e-29 131.7 101 56.4
QL10p062870 Quercus lobata HOM05D000003 ORTHO05D000004 1.7e-28 129.4 111 55.0
QL04p088136 Quercus lobata HOM05D000003 ORTHO05D000004 2.2e-28 129.0 104 51.0
QL03p025076 Quercus lobata HOM05D000003 ORTHO05D000004 4.8e-28 127.9 96 60.4
QL05p052024 Quercus lobata HOM05D000003 ORTHO05D000004 4.8e-28 127.9 103 56.3
QL03p053290 Quercus lobata HOM05D000003 ORTHO05D000004 6.3e-28 127.5 104 54.8
QL03p006515 Quercus lobata HOM05D000003 ORTHO05D000004 8.2e-28 127.1 103 54.4
QL02p022361 Quercus lobata HOM05D000003 ORTHO05D000004 2.4e-27 125.6 106 50.0
QL02p041162 Quercus lobata HOM05D000003 ORTHO05D000004 3.1e-27 125.2 105 53.3
QL09p015564 Quercus lobata HOM05D000003 ORTHO05D000004 5.3e-27 124.4 79 65.8
QL10p061684 Quercus lobata HOM05D000003 ORTHO05D000004 5.3e-27 124.4 111 53.2
QL02p020718 Quercus lobata HOM05D000003 ORTHO05D000004 6.9e-27 124.0 94 57.4
QL06p031073 Quercus lobata HOM05D000003 ORTHO05D000004 6.9e-27 124.0 98 49.0
QL04p002075 Quercus lobata HOM05D000003 ORTHO05D000004 4.5e-26 121.3 102 54.9
QL02p087577 Quercus lobata HOM05D000003 ORTHO05D000004 6.5e-25 117.5 96 53.1
QL03p020372 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-24 116.7 103 50.5
QL05p062712 Quercus lobata HOM05D000003 ORTHO05D000004 1.4e-24 116.3 104 50.0
QL06p011007 Quercus lobata HOM05D000003 ORTHO05D000004 3.2e-24 115.2 104 45.2
QL04p039404 Quercus lobata HOM05D000003 ORTHO05D000004 4.2e-24 114.8 103 52.4
QL05p064920 Quercus lobata HOM05D000003 ORTHO05D000004 9.4e-24 113.6 104 47.1
QL05p026414 Quercus lobata HOM05D000103 ORTHO05D000049 1.2e-23 113.2 103 51.5
QL09p031838 Quercus lobata HOM05D000003 ORTHO05D000004 2.3e-22 109.0 102 45.1
QL12p030327 Quercus lobata HOM05D000003 ORTHO05D000004 2.3e-22 109.0 101 46.5
QL02p000576 Quercus lobata HOM05D002132 ORTHO05D002168 1.5e-21 106.3 96 46.9
QL10p043402 Quercus lobata HOM05D000003 ORTHO05D000004 5.7e-21 104.4 104 48.1
QL10p062138 Quercus lobata HOM05D000003 ORTHO05D000004 1.7e-20 102.8 91 49.5
QL10p062985 Quercus lobata HOM05D000003 ORTHO05D000004 1.7e-20 102.8 91 49.5
QL02p033692 Quercus lobata HOM05D000003 ORTHO05D000004 2.8e-20 102.1 96 46.9
QL04p067637 Quercus lobata HOM05D000003 ORTHO05D000004 8.2e-20 100.5 101 43.6
QL03p071359 Quercus lobata HOM05D000003 ORTHO05D000004 1.8e-19 99.4 78 62.8
QL06p022312 Quercus lobata HOM05D000003 ORTHO05D000004 2.4e-19 99.0 89 47.2
QL04p088840 Quercus lobata HOM05D000003 ORTHO05D000004 5.9e-18 94.4 65 53.8
QL04p085495 Quercus lobata HOM05D020009 ORTHO05D000004 1.7e-17 92.8 113 38.9
QL05p067574 Quercus lobata HOM05D000003 ORTHO05D000004 2.9e-17 92.0 80 52.5
QL12p042719 Quercus lobata HOM05D000003 ORTHO05D000004 2.9e-17 92.0 70 52.9
QL04p009622 Quercus lobata HOM05D000003 ORTHO05D000004 9.4e-16 87.0 76 51.3
QL05p002322 Quercus lobata HOM05D000003 ORTHO05D000004 9.4e-16 87.0 55 60.0
QL05p032179 Quercus lobata HOM05D020009 ORTHO05D000004 1.2e-15 86.7 81 48.1
QL05p065576 Quercus lobata HOM05D000003 ORTHO05D000004 1.6e-15 86.3 71 47.9
QL09p036209 Quercus lobata HOM05D020009 ORTHO05D000004 2.7e-15 85.5 78 48.7
QL11p049760 Quercus lobata HOM05D000003 ORTHO05D000004 2.7e-15 85.5 103 36.9
TAR250G0003 Trochodendron aralioides HOM05D000003 ORTHO05D000004 6.1e-15 84.3 102 38.2
QL09p011339 Quercus lobata HOM05D000003 ORTHO05D000006 1.4e-14 83.2 72 47.2
CiPaw.16G041700 Carya illinoinensis HOM05D000003 ORTHO05D000004 4.4e-13 78.2 101 32.7
QL09p031428 Quercus lobata HOM05D020009 ORTHO05D000004 4.4e-13 78.2 60 50.0
QL12p002221 Quercus lobata HOM05D000003 ORTHO05D000004 1.3e-12 76.6 71 47.9
CiPaw.14G093100 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.2e-12 75.9 101 31.7
CiPaw.05G068400 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.1e-11 72.0 101 32.7
CiPaw.08G120100 Carya illinoinensis HOM05D000003 ORTHO05D000004 4.1e-11 71.6 101 31.7
CiPaw.16G076300 Carya illinoinensis HOM05D000003 ORTHO05D000004 4.1e-11 71.6 101 31.7
QL05p008349 Quercus lobata HOM05D000003 ORTHO05D000006 7.0e-11 70.9 83 45.8
QL05p014002 Quercus lobata HOM05D000003 ORTHO05D000004 7.0e-11 70.9 61 47.5
CiPaw.15G051200 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.5e-10 68.6 95 33.7
QL04p017271 Quercus lobata HOM05D000021 ORTHO05D000010 3.5e-10 68.6 58 48.3
CiPaw.15G109000 Carya illinoinensis HOM05D000003 ORTHO05D000004 7.7e-10 67.4 97 32.0
QL10p007205 Quercus lobata HOM05D000003 ORTHO05D000004 1.0e-09 67.0 52 55.8
QL10p055607 Quercus lobata HOM05D008138 ORTHO05D010043 1.0e-09 67.0 64 43.8
CiPaw.06G023000 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.7e-09 66.2 98 32.7
QL04p016891 Quercus lobata HOM05D000003 ORTHO05D000004 1.7e-09 66.2 63 44.4
QL12p028271 Quercus lobata HOM05D000003 ORTHO05D000004 2.2e-09 65.9 70 45.7
QL93p0138_0008 Quercus lobata HOM05D000003 ORTHO05D000167 3.8e-09 65.1 105 32.4
Haze_05255 Corylus avellana HOM05D000111 ORTHO05D001334 5.0e-09 64.7 102 31.4
CiPaw.16G035600 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.5e-08 63.2 99 27.3
TAR164G0003 Trochodendron aralioides HOM05D000003 ORTHO05D000004 1.5e-08 63.2 75 32.0
QL04p016767 Quercus lobata HOM05D000003 ORTHO05D000004 3.2e-08 62.0 59 47.5
Atru.chr10.669 Acer truncatum HOM05D000003 ORTHO05D000004 4.2e-08 61.6 99 30.3
Aa31LG5G21260 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.5e-08 61.2 109 31.2
QL04p082731 Quercus lobata HOM05D000038 ORTHO05D000143 5.5e-08 61.2 54 50.0
QL05p053348 Quercus lobata HOM05D000003 ORTHO05D000167 5.5e-08 61.2 93 32.3
QL05p073919 Quercus lobata HOM05D000003 ORTHO05D000004 5.5e-08 61.2 100 31.0
QL05p036409 Quercus lobata HOM05D000003 ORTHO05D000004 7.2e-08 60.8 49 49.0
QL09p000062 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-07 60.1 48 47.9
Lj4g0023123 Lotus japonicus HOM05D000003 ORTHO05D000004 1.6e-07 59.7 93 31.2
Aa31LG3G5890 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.1e-07 59.3 96 30.2
CiPaw.13G001400 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.7e-07 58.9 100 27.0
PSO675G0212 Papaver somniferum HOM05D000003 ORTHO05D001026 2.7e-07 58.9 98 29.6
QL05p012339 Quercus lobata HOM05D000003 ORTHO05D000167 2.7e-07 58.9 73 35.6
QL11p037218 Quercus lobata HOM05D000130 ORTHO05D000004 2.7e-07 58.9 107 30.8
CiPaw.05G213600 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.6e-07 58.5 99 29.3
BolC8t48512H Brassica oleracea HOM05D000003 ORTHO05D001091 4.7e-07 58.2 98 31.6
CANSAT21G1403 Cannabis sativa HOM05D000003 ORTHO05D000004 4.7e-07 58.2 100 31.0
CiPaw.15G073500 Carya illinoinensis HOM05D000003 ORTHO05D000004 4.7e-07 58.2 101 25.7
CiPaw.16G069900 Carya illinoinensis HOM05D000003 ORTHO05D000004 4.7e-07 58.2 105 27.6
CiPaw.11G073400 Carya illinoinensis HOM05D000003 ORTHO05D000004 6.1e-07 57.8 95 29.5
Aa31LG4G10800 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.0e-07 57.4 104 26.9
BcaB07g32628 Brassica carinata HOM05D000003 ORTHO05D001498 1.0e-06 57.0 97 32.0
CiPaw.03G161500 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.0e-06 57.0 118 28.8
CiPaw.07G069100 Carya illinoinensis HOM05D000003 ORTHO05D000167 1.4e-06 56.6 92 30.4
CiPaw.14G039600 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.8e-06 56.2 100 28.0
Aa31sc434G50 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.3e-06 55.8 95 29.5
BcaB01g03560 Brassica carinata HOM05D000003 ORTHO05D001091 2.3e-06 55.8 91 34.1
BcaB04g17562 Brassica carinata HOM05D000003 ORTHO05D001498 2.3e-06 55.8 103 30.1
CiPaw.14G084100 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.3e-06 55.8 96 29.2
QL03p040433 Quercus lobata HOM05D000003 ORTHO05D000004 3.0e-06 55.5 88 33.0
Aa31LG7G2740 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.2e-06 54.7 104 24.0
CANSAT78G0786 Cannabis sativa HOM05D000003 ORTHO05D000004 5.2e-06 54.7 108 32.4
PSO210G4425 Papaver somniferum HOM05D000003 ORTHO05D000004 5.2e-06 54.7 108 27.8
Atru.chr1.1181 Acer truncatum HOM05D000003 ORTHO05D000167 6.7e-06 54.3 106 25.5
CiPaw.09G167800 Carya illinoinensis HOM05D000003 ORTHO05D000004 6.7e-06 54.3 113 27.4
FvH4_3g23591 Fragaria vesca HOM05D000003 ORTHO05D000004 6.7e-06 54.3 100 35.0
QL02p069196 Quercus lobata HOM05D000003 ORTHO05D000167 6.7e-06 54.3 99 29.3
CANSAT64G2795 Cannabis sativa HOM05D000003 ORTHO05D000004 8.8e-06 53.9 99 26.3
QL01p018735 Quercus lobata HOM05D000003 ORTHO05D000004 8.8e-06 53.9 97 32.0


User provided reference genes

Program Settings