Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p029860 Quercus lobata HOM05D009035 ORTHO05D011039 2.0e-33 145.2 74 100.0
QL09p030163 Quercus lobata HOM05D009035 ORTHO05D011039 2.0e-33 145.2 74 100.0
Gohir.D03G062801 Gossypium hirsutum HOM05D009035 ORTHO05D011039 5.4e-23 110.5 75 78.7
Potri.005G184450 Populus trichocarpa HOM05D009035 ORTHO05D011039 1.6e-22 109.0 75 77.3
COL.COLO4_28339 Corchorus olitorius HOM05D009035 ORTHO05D011039 6.0e-22 107.1 74 77.0
Potri.002G075850 Populus trichocarpa HOM05D009035 ORTHO05D011039 6.0e-22 107.1 75 78.7
Glyma.14G158750 Glycine max HOM05D009035 ORTHO05D011039 1.3e-21 105.9 72 77.8
Lalb_Chr08g0240971 Lupinus albus HOM05D009035 ORTHO05D011039 3.0e-21 104.8 73 75.3
CiPaw.15G025000 Carya illinoinensis HOM05D009035 ORTHO05D011039 6.6e-21 103.6 66 84.8
Glyma.13G035950 Glycine max HOM05D009035 ORTHO05D011039 9.6e-20 99.8 74 71.6
Sabra05G0141100 Salix brachista HOM05D009035 ORTHO05D011039 3.6e-19 97.8 75 72.0
Lalb_Chr04g0253631 Lupinus albus HOM05D009035 ORTHO05D011039 6.9e-18 93.6 74 68.9
Lalb_Chr11g0066261 Lupinus albus HOM05D009035 ORTHO05D011039 9.0e-18 93.2 75 72.0
Migut.C01084 Erythranthe guttata HOM05D009035 ORTHO05D011039 1.5e-17 92.4 75 68.0
Manes.02G171850 Manihot esculenta HOM05D009035 ORTHO05D011039 3.4e-17 91.3 77 70.1
CiPaw.16G019900 Carya illinoinensis HOM05D009035 ORTHO05D011039 1.7e-16 89.0 75 68.0
CAN.G46.17 Capsicum annuum HOM05D009035 ORTHO05D011039 2.2e-16 88.6 74 71.6
Migut.C01083 Erythranthe guttata HOM05D009035 ORTHO05D011039 2.2e-16 88.6 75 64.0
Ca_16623_v3 Cicer arietinum L. HOM05D009035 ORTHO05D011039 8.4e-16 86.7 70 65.7
Sed0005031 Sechium edule HOM05D009035 ORTHO05D011039 1.2e-14 82.8 66 66.7
Sc26g0002810 Simmondsia chinensis HOM05D009035 ORTHO05D011039 2.7e-14 81.6 73 61.6
Medtr1g029590 Medicago truncatula HOM05D009035 ORTHO05D011039 3.5e-14 81.3 75 62.7
Oeu045983.1 Olea europaea HOM05D009035 ORTHO05D011039 3.5e-14 81.3 74 60.8
ClCG11G008460 Citrullus lanatus HOM05D009035 ORTHO05D011039 4.6e-14 80.9 77 59.7
DCAR_016721 Daucus carota HOM05D009035 ORTHO05D011039 2.3e-13 78.6 71 54.9
CsaV3_7G022120 Cucumis sativus L. HOM05D009035 ORTHO05D011039 6.7e-13 77.0 77 54.5
Lsat_1_v5_gn_1_10260 Lactuca sativa HOM05D009035 ORTHO05D011039 8.7e-13 76.6 76 56.6
Sed0013478 Sechium edule HOM05D009035 ORTHO05D011039 1.9e-12 75.5 75 54.7
Solyc04g063220.1 Solanum lycopersicum HOM05D009035 ORTHO05D011039 1.9e-12 75.5 76 59.2
Carub.0006s2697 Capsella rubella HOM05D009035 ORTHO05D011039 2.5e-12 75.1 67 62.7
EL10Ac1g01393 Beta vulgaris HOM05D009035 ORTHO05D011039 1.6e-11 72.4 75 56.0
A03p28030 Brassica napus HOM05D009035 ORTHO05D011039 1.6e-11 72.4 73 57.5
FAN15G2485 Fragaria x ananassa HOM05D028204 ORTHO05D011039 1.8e-10 68.9 82 56.1
C03p33890 Brassica napus HOM05D009035 ORTHO05D011039 2.4e-10 68.6 73 56.2
EL10Ac8g19780 Beta vulgaris HOM05D009035 ORTHO05D011039 5.3e-10 67.4 61 60.7
arahy.Tifrunner.gnm1.ann1.ECT8PE Arachis hypogaea HOM05D009035 ORTHO05D011039 2.0e-09 65.5 58 69.0
FAN24G1295 Fragaria x ananassa HOM05D028204 ORTHO05D011039 2.0e-09 65.5 82 53.7
FAN27G2506 Fragaria x ananassa HOM05D028204 ORTHO05D011039 3.4e-09 64.7 82 52.4
FvH4_2g00980 Fragaria vesca HOM05D028204 ORTHO05D011039 7.6e-09 63.5 81 53.1
Peaxi162Scf00066g00086 Petunia axillaris HOM05D009035 ORTHO05D011039 7.6e-09 63.5 55 67.3
Nn1g08927 Nelumbo nucifera HOM05D009035 ORTHO05D011039 3.5e-06 54.7 53 54.7


User provided reference genes

Program Settings