Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p029462 Quercus lobata HOM05D006288 ORTHO05D007416 4.9e-61 237.7 123 100.0
Duzib133G0644 Durio zibethinus HOM05D006288 ORTHO05D007416 1.2e-43 179.9 119 77.3
Duzib133G1254 Durio zibethinus HOM05D006288 ORTHO05D007416 1.2e-43 179.9 119 77.3
Gohir.D12G056100 Gossypium hirsutum HOM05D006288 ORTHO05D007416 4.6e-43 177.9 119 76.5
Gorai.008G059200 Gossypium raimondii HOM05D006288 ORTHO05D007416 4.6e-43 177.9 119 76.5
Gohir.A12G056700 Gossypium hirsutum HOM05D006288 ORTHO05D007416 2.3e-42 175.6 119 75.6
Thecc.10G108100 Theobroma cacao HOM05D005170 ORTHO05D007416 3.9e-42 174.9 119 76.5
GSVIVG01036516001 Vitis vinifera HOM05D006288 ORTHO05D007416 3.9e-42 174.9 120 79.2
Manes.01G106000 Manihot esculenta HOM05D006288 ORTHO05D007416 8.7e-42 173.7 117 75.2
Cpa.g.sc14.255 Carica papaya HOM05D006288 ORTHO05D007416 1.5e-41 172.9 123 73.2
Cfa007713 Carpinus fangiana HOM05D006288 ORTHO05D007416 3.3e-41 171.8 110 80.0
Dinv34894 Davidia involucrata HOM05D006288 ORTHO05D007416 5.6e-41 171.0 115 78.3
Lj3g0015520 Lotus japonicus HOM05D006288 ORTHO05D007416 5.6e-41 171.0 112 77.7
Oeu007090.1 Olea europaea HOM05D006288 ORTHO05D007416 5.6e-41 171.0 119 77.3
TAR629G2245 Trochodendron aralioides HOM05D006288 ORTHO05D007416 2.1e-40 169.1 119 73.9
TPR.G14566 Trifolium pratense HOM05D006288 ORTHO05D007416 4.8e-40 167.9 116 76.7
Cc07_g04640 Coffea canephora HOM05D006288 ORTHO05D007416 1.1e-39 166.8 119 74.8
vmacro18118 Vaccinium macrocarpon HOM05D006288 ORTHO05D007416 1.4e-39 166.4 117 73.5
Rhsim10G0068900 Rhododendron simsii HOM05D006288 ORTHO05D007416 2.4e-39 165.6 117 74.4
CSS0015874 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 3.1e-39 165.2 120 74.2
CSS0028097 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 3.1e-39 165.2 120 74.2
Ca_13697_v3 Cicer arietinum L. HOM05D006288 ORTHO05D007416 3.1e-39 165.2 116 75.9
PSO832G2920 Papaver somniferum HOM05D006288 ORTHO05D007416 4.0e-39 164.9 110 77.3
PSO210G6985 Papaver somniferum HOM05D006288 ORTHO05D007416 5.3e-39 164.5 110 76.4
Phvul.004G044700 Phaseolus vulgaris HOM05D006288 ORTHO05D007416 1.2e-38 163.3 113 75.2
Psat5g210920 Pisum sativum HOM05D006288 ORTHO05D007416 1.5e-38 162.9 116 74.1
Manes.02G062500 Manihot esculenta HOM05D006288 ORTHO05D007416 2.0e-38 162.5 117 71.8
CiPaw.03G081300 Carya illinoinensis HOM05D006288 ORTHO05D007416 2.6e-38 162.2 110 75.5
Hma1.2p1_0304F.1_g119265 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 2.6e-38 162.2 120 73.3
Hma1.2p1_0304F.1_g119270 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 2.6e-38 162.2 120 73.3
Rhsim08G0078400 Rhododendron simsii HOM05D006288 ORTHO05D007416 3.4e-38 161.8 117 71.8
Psat5g210840 Pisum sativum HOM05D006288 ORTHO05D007416 1.3e-37 159.8 107 75.7
Atru.chr8.595 Acer truncatum HOM05D006288 ORTHO05D007416 1.7e-37 159.5 119 68.9
Sc11g0008960 Simmondsia chinensis HOM05D006288 ORTHO05D007416 1.7e-37 159.5 111 74.8
RcHm_v2.0_Chr2g0164421 Rosa chinensis HOM05D006288 ORTHO05D007416 2.2e-37 159.1 112 72.3
Medtr3g034300 Medicago truncatula HOM05D006288 ORTHO05D007416 2.9e-37 158.7 116 73.3
Hund16253 Selenicereus undatus HOM05D006288 ORTHO05D007416 2.9e-37 158.7 110 74.5
Prupe.3G247000 Prunus persica HOM05D006288 ORTHO05D007416 3.8e-37 158.3 118 70.3
PGR004G0851 Punica granatum HOM05D006288 ORTHO05D007416 3.8e-37 158.3 121 69.4
arahy.Tifrunner.gnm1.ann1.J0I6JM Arachis hypogaea HOM05D006288 ORTHO05D007416 6.4e-37 157.5 112 73.2
PSO675G0562 Papaver somniferum HOM05D006288 ORTHO05D007416 6.4e-37 157.5 110 73.6
CSS0029131 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 8.4e-37 157.1 120 71.7
Migut.K00879 Erythranthe guttata HOM05D006288 ORTHO05D007416 1.1e-36 156.8 119 69.7
Psat5g212400 Pisum sativum HOM05D006288 ORTHO05D007416 1.1e-36 156.8 114 69.3
Ah.16g100880 Amaranthus hybridus HOM05D006288 ORTHO05D007416 1.4e-36 156.4 110 73.6
CSS0016762 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 1.4e-36 156.4 119 69.7
CSS0047986 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 1.4e-36 156.4 119 69.7
CsaV3_4G009920 Cucumis sativus L. HOM05D006288 ORTHO05D007416 1.9e-36 156.0 121 68.6
Lalb_Chr21g0318141 Lupinus albus HOM05D006288 ORTHO05D007416 1.9e-36 156.0 112 70.5
PSO541G1058 Papaver somniferum HOM05D006288 ORTHO05D007416 1.9e-36 156.0 110 72.7
PGSC0003DMG400026550 Solanum tuberosum HOM05D006288 ORTHO05D007416 1.9e-36 156.0 110 73.6
TWI60G1717 Tripterygium wilfordii HOM05D006288 ORTHO05D007416 1.9e-36 156.0 109 73.4
Glyma.19G037000 Glycine max HOM05D006288 ORTHO05D007416 2.4e-36 155.6 121 70.2
Peaxi162Scf00019g00316 Petunia axillaris HOM05D006288 ORTHO05D007416 2.4e-36 155.6 110 74.5
Solyc02g065690.3 Solanum lycopersicum HOM05D006288 ORTHO05D007416 2.4e-36 155.6 110 73.6
Sopen02g015910 Solanum pennellii HOM05D006288 ORTHO05D007416 2.4e-36 155.6 110 73.6
Eucgr.F02878 Eucalyptus grandis HOM05D006288 ORTHO05D007416 3.2e-36 155.2 110 71.8
Glyma.13G051400 Glycine max HOM05D006288 ORTHO05D007416 3.2e-36 155.2 121 69.4
VMungo0464G1523 Vigna mungo HOM05D006288 ORTHO05D007416 3.2e-36 155.2 113 73.5
SalBow7G0779 Salvia bowleyana HOM05D006288 ORTHO05D007416 9.3e-36 153.7 119 70.6
Nitab4.5_0003203g0060 Nicotiana tabacum HOM05D006288 ORTHO05D007416 1.2e-35 153.3 109 74.3
MD09G1077100 Malus domestica HOM05D006288 ORTHO05D007416 4.6e-35 151.4 118 65.3
ATR0691G027 Amborella trichopoda HOM05D006288 ORTHO05D007416 6.0e-35 151.0 116 68.1
MD17G1067500 Malus domestica HOM05D006288 ORTHO05D007416 6.0e-35 151.0 117 65.8
SGA_v2.0_scaffold30G12393 Striga asiatica HOM05D006288 ORTHO05D007416 1.0e-34 150.2 119 67.2
Lsat_1_v5_gn_4_174040 Lactuca sativa HOM05D006288 ORTHO05D007416 1.1e-33 146.7 115 67.8
CANSAT64G2264 Cannabis sativa HOM05D005170 ORTHO05D007416 1.5e-33 146.4 108 68.5
FAN10G3625 Fragaria x ananassa HOM05D006288 ORTHO05D007416 5.6e-33 144.4 117 64.1
AUR62023135 Chenopodium quinoa HOM05D006288 ORTHO05D007416 1.6e-32 142.9 119 63.0
Os02g0190900 Oryza sativa ssp. japonica HOM05D006288 ORTHO05D007416 2.1e-32 142.5 110 68.2
unitig_32.g10759 Utricularia gibba HOM05D006288 ORTHO05D007416 4.8e-32 141.4 119 63.9
Sabra17G0089200 Salix brachista HOM05D006288 ORTHO05D007416 1.4e-31 139.8 93 76.3
THA.LOC104805112 Tarenaya hassleriana HOM05D006288 ORTHO05D007416 2.4e-31 139.0 111 65.8
Zm00001eb234970 Zea mays HOM05D006288 ORTHO05D007416 3.1e-31 138.7 106 65.1
EL10Ac2g04409 Beta vulgaris HOM05D006288 ORTHO05D007416 5.3e-31 137.9 110 67.3
FAN10G2886 Fragaria x ananassa HOM05D006288 ORTHO05D007416 4.5e-30 134.8 106 67.9
FAN14G1171 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.3e-29 133.3 118 62.7
BolC7t44529H Brassica oleracea HOM05D006288 ORTHO05D007416 1.7e-29 132.9 106 62.3
Atru.BG.156.p Acer truncatum HOM05D006288 ORTHO05D007416 2.2e-29 132.5 94 70.2
Actinidia17612 Actinidia chinensis HOM05D006288 ORTHO05D007416 2.9e-29 132.1 99 71.7
C07p39960 Brassica napus HOM05D006288 ORTHO05D007416 2.9e-29 132.1 106 62.3
BraA06t26742Z Brassica rapa HOM05D006288 ORTHO05D007416 4.9e-29 131.3 106 61.3
HPP92_018391 Vanilla planifolia HOM05D006288 ORTHO05D007416 1.1e-28 130.2 115 61.7
SEGI_23755 Sequoiadendron giganteum HOM05D006288 ORTHO05D007416 2.5e-28 129.0 113 59.3
Carub.0008s0943 Capsella rubella HOM05D006288 ORTHO05D007416 4.6e-27 124.8 114 57.0
Potri.017G106200 Populus trichocarpa HOM05D006288 ORTHO05D007416 6.7e-26 120.9 112 58.9
Actinidia26277 Actinidia chinensis HOM05D006288 ORTHO05D007416 8.7e-26 120.6 120 58.3
Nn4g23570 Nelumbo nucifera HOM05D006288 ORTHO05D007416 8.7e-26 120.6 119 57.1
DCAR_011002 Daucus carota HOM05D006288 ORTHO05D007416 1.9e-25 119.4 76 80.3
Nitab4.5_0002249g0090 Nicotiana tabacum HOM05D006288 ORTHO05D007416 1.9e-25 119.4 76 80.3
CAN.G93.47 Capsicum annuum HOM05D006288 ORTHO05D007416 4.3e-25 118.2 110 59.1
COL.COLO4_00228 Corchorus olitorius HOM05D006288 ORTHO05D007416 4.3e-25 118.2 76 80.3
MELO3C018910.2 Cucumis melo HOM05D006288 ORTHO05D007416 1.6e-24 116.3 121 54.5
Aa31LG7G12050 Aethionema arabicum HOM05D006288 ORTHO05D007416 4.8e-24 114.8 117 52.1
Lsat_1_v5_gn_4_173980 Lactuca sativa HOM05D006288 ORTHO05D007416 1.1e-23 113.6 115 54.8
Hma1.2p1_2186F.1_g316383 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 4.1e-23 111.7 76 76.3
Hma1.2p1_3488F.1_g336360 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 4.1e-23 111.7 76 76.3
ClCG07G016140 Citrullus lanatus HOM05D006288 ORTHO05D007416 1.2e-22 110.2 121 52.1
FAN02G0987 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.3e-21 106.7 118 54.2
TAR371G0310 Trochodendron aralioides HOM05D006288 ORTHO05D007416 1.3e-21 106.7 92 59.8
ECA232G4388 Erigeron canadensis HOM05D006288 ORTHO05D007416 2.2e-21 105.9 110 53.6
FAN09G1057 Fragaria x ananassa HOM05D010582 ORTHO05D007416 3.8e-21 105.1 118 53.4
FAN05G5526 Fragaria x ananassa HOM05D006288 ORTHO05D007416 5.0e-21 104.8 118 53.4
Sed0021882 Sechium edule HOM05D006288 ORTHO05D007416 5.0e-21 104.8 122 51.6
CDE10G0042 Ceratophyllum demersum HOM05D006288 ORTHO05D007416 8.5e-21 104.0 96 55.2
FvH4_6g46100 Fragaria vesca HOM05D006288 ORTHO05D007416 2.1e-19 99.4 72 73.6
Eucgr.K01979 Eucalyptus grandis HOM05D006288 ORTHO05D007416 1.0e-18 97.1 88 61.4
AT5G49550 Arabidopsis thaliana HOM05D006288 ORTHO05D007416 1.8e-18 96.3 111 47.7
AL954U10010 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 2.3e-18 95.9 108 48.1
CARHR287980 Cardamine hirsuta HOM05D006288 ORTHO05D007416 2.3e-18 95.9 108 48.1
Thhalv10005135m.g Eutrema salsugineum HOM05D006288 ORTHO05D007416 3.9e-18 95.1 73 63.0
A09p04890 Brassica napus HOM05D006288 ORTHO05D007416 6.7e-18 94.4 77 61.0
AL8G23340 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 8.8e-18 94.0 111 46.8
BraA09t36127Z Brassica rapa HOM05D006288 ORTHO05D007416 8.8e-18 94.0 73 63.0
HanXRQChr15g0464891 Helianthus annuus HOM05D006288 ORTHO05D007416 1.1e-17 93.6 93 57.0
BcaC04g23731 Brassica carinata HOM05D006288 ORTHO05D007416 1.5e-17 93.2 71 63.4
C09p05280 Brassica napus HOM05D006288 ORTHO05D007416 1.5e-17 93.2 71 63.4
Sp2g19860 Schrenkiella parvula HOM05D006288 ORTHO05D007416 2.5e-17 92.4 115 45.2
BcaB04g19620 Brassica carinata HOM05D006288 ORTHO05D007416 4.3e-17 91.7 73 60.3
FvH4_6g24710 Fragaria vesca HOM05D006288 ORTHO05D007416 9.7e-17 90.5 59 76.3
FAN14G4004 Fragaria x ananassa HOM05D006288 ORTHO05D007416 9.7e-17 90.5 59 76.3
Mapoly0015s0174 Marchantia polymorpha HOM05D006288 ORTHO05D007416 1.7e-16 89.7 111 43.2
AagrBONN_evm.TU.Sc2ySwM_344.2644 Anthoceros agrestis HOM05D006288 ORTHO05D007416 3.4e-14 82.0 111 38.7
Pp3c21_3840 Physcomitrium patens HOM05D006288 ORTHO05D007416 1.1e-12 77.0 102 41.2
SHI46878 Sapria himalayana HOM05D006288 ORTHO05D007416 2.5e-12 75.9 72 48.6
SMO358G0122 Selaginella moellendorffii HOM05D006288 ORTHO05D007416 1.1e-09 67.0 94 36.2
FAN03G1360 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.0e-09 66.2 53 62.3
Psat6g174640 Pisum sativum HOM05D006288 ORTHO05D007416 2.2e-08 62.8 46 65.2
Haze_03283 Corylus avellana HOM05D002280 ORTHO05D002322 1.8e-07 59.7 43 69.8
FAN06G1951 Fragaria x ananassa HOM05D006288 ORTHO05D007416 9.1e-07 57.4 106 38.7


User provided reference genes

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