Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p029208 Quercus lobata HOM05D000248 ORTHO05D000146 6.1e-51 203.8 96 100.0
QL09p029257 Quercus lobata HOM05D000248 ORTHO05D000146 1.4e-10 69.7 50 64.0
QL09p029160 Quercus lobata HOM05D000248 ORTHO05D000146 1.3e-08 63.2 50 60.0
QL09p029329 Quercus lobata HOM05D000248 ORTHO05D000146 6.4e-08 60.8 50 56.0
Lalb_Chr02g0149351 Lupinus albus HOM05D000248 ORTHO05D000146 1.4e-07 59.7 43 58.1
TAR633G1009 Trochodendron aralioides HOM05D000248 ORTHO05D000146 2.4e-07 58.9 58 43.1
SGA_v2.0_scaffold80G25909 Striga asiatica HOM05D000248 ORTHO05D000146 3.2e-07 58.5 57 43.9
QL09p029313 Quercus lobata HOM05D000248 ORTHO05D000146 5.4e-07 57.8 50 52.0
VMungo0720G0681 Vigna mungo HOM05D000248 ORTHO05D000146 9.3e-07 57.0 52 46.2
Dinv06644 Davidia involucrata HOM05D000248 ORTHO05D000146 1.2e-06 56.6 51 47.1
Actinidia38904 Actinidia chinensis HOM05D000248 ORTHO05D000146 1.6e-06 56.2 56 46.4
Gorai.004G261300 Gossypium raimondii HOM05D000248 ORTHO05D000146 1.6e-06 56.2 40 60.0
Solyc05g055870.3 Solanum lycopersicum HOM05D000248 ORTHO05D000146 1.6e-06 56.2 64 45.3
Sopen05g034270 Solanum pennellii HOM05D000248 ORTHO05D000146 1.6e-06 56.2 64 45.3
Thecc.05G202200 Theobroma cacao HOM05D000248 ORTHO05D000146 1.6e-06 56.2 40 60.0
Aqoxy2G03733 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 2.1e-06 55.8 45 51.1
Ca_09975_v3 Cicer arietinum L. HOM05D000248 ORTHO05D000146 2.1e-06 55.8 43 55.8
Ca_09991_v3 Cicer arietinum L. HOM05D000248 ORTHO05D000146 2.1e-06 55.8 43 55.8
Nn3g19934 Nelumbo nucifera HOM05D000248 ORTHO05D000146 2.1e-06 55.8 59 40.7
Duzib177G0899 Durio zibethinus HOM05D000248 ORTHO05D000146 2.7e-06 55.5 40 60.0
Nn3g19935 Nelumbo nucifera HOM05D000248 ORTHO05D000146 2.7e-06 55.5 58 41.4
QL09p029288 Quercus lobata HOM05D000248 ORTHO05D000146 2.7e-06 55.5 50 54.0
TWI59G0331 Tripterygium wilfordii HOM05D000248 ORTHO05D000146 2.7e-06 55.5 61 42.6
Actinidia34780 Actinidia chinensis HOM05D000248 ORTHO05D000146 3.5e-06 55.1 53 49.1
Ca_09974_v3 Cicer arietinum L. HOM05D000248 ORTHO05D000146 3.5e-06 55.1 44 52.3
Ca_09990_v3 Cicer arietinum L. HOM05D000248 ORTHO05D000146 3.5e-06 55.1 44 52.3
Duzib128G1684 Durio zibethinus HOM05D000248 ORTHO05D000146 3.5e-06 55.1 40 60.0
Gohir.A08G224500 Gossypium hirsutum HOM05D000248 ORTHO05D000146 3.5e-06 55.1 40 57.5
Gohir.D08G244800 Gossypium hirsutum HOM05D000248 ORTHO05D000146 3.5e-06 55.1 40 57.5
Lalb_Chr06g0168391 Lupinus albus HOM05D000248 ORTHO05D000146 3.5e-06 55.1 44 56.8
QL09p029277 Quercus lobata HOM05D000248 ORTHO05D000146 3.5e-06 55.1 50 52.0
QL09p029398 Quercus lobata HOM05D000248 ORTHO05D000146 3.5e-06 55.1 50 48.0
VMungo0720G2270 Vigna mungo HOM05D000248 ORTHO05D000146 3.5e-06 55.1 40 62.5
Eucgr.H01359 Eucalyptus grandis HOM05D000248 ORTHO05D000146 4.6e-06 54.7 59 44.1
QL04p027246 Quercus lobata HOM05D000005 ORTHO05D000012 4.6e-06 54.7 50 54.0
QL09p029222 Quercus lobata HOM05D000248 ORTHO05D000146 4.6e-06 54.7 50 54.0
Sabra06G0209400 Salix brachista HOM05D000248 ORTHO05D000146 4.6e-06 54.7 54 48.1
Aqoxy2G03759 Aquilegia oxysepala HOM05D000248 ORTHO05D000146 6.0e-06 54.3 45 46.7
Cfa006293 Carpinus fangiana HOM05D000248 ORTHO05D000146 6.0e-06 54.3 45 53.3
Lalb_Chr21g0311351 Lupinus albus HOM05D000248 ORTHO05D000146 6.0e-06 54.3 40 52.5
Nn1g07798 Nelumbo nucifera HOM05D000248 ORTHO05D000146 6.0e-06 54.3 59 39.0
QL09p029359 Quercus lobata HOM05D000248 ORTHO05D000146 6.0e-06 54.3 50 48.0
vmacro10402 Vaccinium macrocarpon HOM05D000248 ORTHO05D000146 6.0e-06 54.3 57 43.9
CAN.G694.11 Capsicum annuum HOM05D000248 ORTHO05D000146 7.8e-06 53.9 55 49.1
Dinv05673 Davidia involucrata HOM05D000248 ORTHO05D000146 7.8e-06 53.9 40 57.5
FAN05G5517 Fragaria x ananassa HOM05D000248 ORTHO05D000146 7.8e-06 53.9 44 54.5
FAN05G5522 Fragaria x ananassa HOM05D000248 ORTHO05D000146 7.8e-06 53.9 44 54.5
Lj5g0009115 Lotus japonicus HOM05D000248 ORTHO05D000146 7.8e-06 53.9 40 57.5
Psat6g137880 Pisum sativum HOM05D000248 ORTHO05D000146 7.8e-06 53.9 40 57.5
PGSC0003DMG400023354 Solanum tuberosum HOM05D000248 ORTHO05D000146 7.8e-06 53.9 55 49.1
THA.LOC104805126 Tarenaya hassleriana HOM05D000248 ORTHO05D000146 7.8e-06 53.9 44 50.0
TWI23G0538 Tripterygium wilfordii HOM05D000248 ORTHO05D000146 7.8e-06 53.9 51 41.2
GSVIVG01003897001 Vitis vinifera HOM05D000248 ORTHO05D000146 7.8e-06 53.9 39 61.5


User provided reference genes

Program Settings