Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p028852 Quercus lobata HOM05D000009 ORTHO05D000008 4.7e-65 251.5 175 100.0
QL08p041015 Quercus lobata HOM05D000009 ORTHO05D000008 5.4e-29 131.7 190 48.4
QL08p004928 Quercus lobata HOM05D000009 ORTHO05D000008 1.2e-28 130.6 169 59.2
Dinv12471 Davidia involucrata HOM05D000009 ORTHO05D000008 2.8e-17 92.8 177 54.2
Dinv20751 Davidia involucrata HOM05D000009 ORTHO05D000008 3.6e-17 92.4 174 52.3
Manes.09G019701 Manihot esculenta HOM05D000009 ORTHO05D000008 6.8e-16 88.2 168 35.7
TWI38G1899 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 6.8e-16 88.2 177 49.7
Dinv12468 Davidia involucrata HOM05D000009 ORTHO05D000008 1.2e-15 87.4 173 51.4
Dinv12469 Davidia involucrata HOM05D000009 ORTHO05D000008 1.2e-15 87.4 173 51.4
Manes.09G019900 Manihot esculenta HOM05D000009 ORTHO05D000008 2.0e-15 86.7 168 35.7
TWI09G0612 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 2.6e-15 86.3 171 50.9
Dinv26589 Davidia involucrata HOM05D000009 ORTHO05D000008 9.9e-15 84.3 176 49.4
TWI38G1842 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 1.3e-14 84.0 168 44.6
Dinv02315 Davidia involucrata HOM05D000009 ORTHO05D000008 2.2e-14 83.2 173 46.8
Dinv06310 Davidia involucrata HOM05D000009 ORTHO05D003343 4.9e-14 82.0 173 55.5
Dinv24994 Davidia involucrata HOM05D000009 ORTHO05D000008 8.4e-14 81.3 173 52.0
MD14G1072100 Malus domestica HOM05D000009 ORTHO05D000008 4.1e-13 79.0 159 30.2
Dinv12470 Davidia involucrata HOM05D000009 ORTHO05D000008 1.2e-12 77.4 173 51.4
Lalb_Chr20g0110661 Lupinus albus HOM05D000009 ORTHO05D000008 1.2e-12 77.4 164 48.2
PGR083G0305 Punica granatum HOM05D000009 ORTHO05D000008 1.6e-12 77.0 169 45.6
TWI32G0243 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 1.6e-12 77.0 82 48.8
PGR004G0995 Punica granatum HOM05D000009 ORTHO05D000008 2.1e-12 76.6 171 42.1
Manes.09G019801 Manihot esculenta HOM05D000009 ORTHO05D000008 2.7e-12 76.3 171 38.0
Lalb_Chr04g0256361 Lupinus albus HOM05D000009 ORTHO05D000008 3.5e-12 75.9 161 46.6
Lalb_Chr20g0110671 Lupinus albus HOM05D000009 ORTHO05D000008 3.5e-12 75.9 171 45.6
Glyma.03G048100 Glycine max HOM05D000009 ORTHO05D000008 1.0e-11 74.3 164 47.0
Lalb_Chr04g0256741 Lupinus albus HOM05D000009 ORTHO05D000008 1.0e-11 74.3 161 47.8
Hma1.2p1_0465F.1_g158360 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.3e-11 73.9 176 37.5
Hma1.2p1_0924F.1_g237240 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.3e-11 73.9 174 29.3
Dinv20763 Davidia involucrata HOM05D000009 ORTHO05D000008 1.7e-11 73.6 171 50.9
Thecc.05G153000 Theobroma cacao HOM05D000009 ORTHO05D000008 1.7e-11 73.6 163 54.0
Hma1.2p1_1168F.1_g263060 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 6.6e-11 71.6 179 34.6
Phvul.007G254700 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 6.6e-11 71.6 164 36.6
VMungo0720G0680 Vigna mungo HOM05D000009 ORTHO05D000008 8.6e-11 71.2 163 38.7
QL07p001098 Quercus lobata HOM05D000009 ORTHO05D000008 1.1e-10 70.9 84 44.0
Dinv06997 Davidia involucrata HOM05D000009 ORTHO05D000008 1.5e-10 70.5 168 34.5
Hma1.2p1_0973F.1_g243030 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.5e-10 70.5 181 30.4
TWI32G1271 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 1.5e-10 70.5 167 47.9
EL10Ac9g22802 Beta vulgaris HOM05D000009 ORTHO05D000008 1.9e-10 70.1 175 30.3
Hma1.2p1_1755F.1_g300960 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 2.5e-10 69.7 174 30.5
Ciclev10004287m.g Citrus clementina HOM05D000009 ORTHO05D000008 3.3e-10 69.3 176 39.8
QL07p001053 Quercus lobata HOM05D000009 ORTHO05D000008 3.3e-10 69.3 103 38.8
EL10Ac4g07889 Beta vulgaris HOM05D000009 ORTHO05D000008 4.3e-10 68.9 164 31.1
QL02p093078 Quercus lobata HOM05D000009 ORTHO05D000008 4.3e-10 68.9 86 40.7
Dinv01264 Davidia involucrata HOM05D000009 ORTHO05D016233 5.6e-10 68.6 171 53.2
Lj9C292G2 Lonicera japonica HOM05D000009 ORTHO05D000008 5.6e-10 68.6 173 30.1
TWI81G1048 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 5.6e-10 68.6 90 43.3
AUR62020496 Chenopodium quinoa HOM05D000009 ORTHO05D000008 9.6e-10 67.8 170 47.1
Lj9C287G5 Lonicera japonica HOM05D000009 ORTHO05D000008 9.6e-10 67.8 174 32.2
CiPaw.10G100600 Carya illinoinensis HOM05D000009 ORTHO05D000008 1.2e-09 67.4 104 35.6
QL07p001153 Quercus lobata HOM05D000009 ORTHO05D000008 1.2e-09 67.4 167 55.7
EL10Ac4g07895 Beta vulgaris HOM05D000009 ORTHO05D000008 1.6e-09 67.0 164 31.1
Phvul.001G134300 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 1.6e-09 67.0 164 47.6
QL07p001235 Quercus lobata HOM05D000009 ORTHO05D000008 1.6e-09 67.0 157 51.6
MD14G1072300 Malus domestica HOM05D000009 ORTHO05D000008 2.8e-09 66.2 126 53.2
Ciclev10004284m.g Citrus clementina HOM05D000009 ORTHO05D000008 3.6e-09 65.9 176 46.6
Ciclev10006925m.g Citrus clementina HOM05D000009 ORTHO05D000008 3.6e-09 65.9 176 39.8
Haze_19816 Corylus avellana HOM05D000009 ORTHO05D020375 3.6e-09 65.9 150 52.7
Glyma.19G135600 Glycine max HOM05D000009 ORTHO05D000008 3.6e-09 65.9 164 45.1
PGR004G0476 Punica granatum HOM05D000009 ORTHO05D000008 3.6e-09 65.9 167 47.3
Lj9C284T0 Lonicera japonica HOM05D000009 ORTHO05D000008 4.7e-09 65.5 174 31.0
PGR004G2410 Punica granatum HOM05D000009 ORTHO05D000008 6.2e-09 65.1 153 44.4
TWI59G1238 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 6.2e-09 65.1 127 52.0
PGSC0003DMG400017146 Solanum tuberosum HOM05D000009 ORTHO05D000008 8.1e-09 64.7 165 27.9
Glyma.02G184300 Glycine max HOM05D000009 ORTHO05D000008 1.4e-08 63.9 164 46.3
Phvul.007G254200 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 1.4e-08 63.9 193 45.1
TWI09G0242 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 1.8e-08 63.5 158 47.5
Lj9P288T16 Lonicera japonica HOM05D000009 ORTHO05D000008 2.4e-08 63.2 169 32.0
QL07p001290 Quercus lobata HOM05D000009 ORTHO05D000008 3.1e-08 62.8 151 51.7
VMungo0720G1074 Vigna mungo HOM05D000009 ORTHO05D000008 3.1e-08 62.8 158 38.6
VMungo0720G2424 Vigna mungo HOM05D000009 ORTHO05D000008 3.1e-08 62.8 161 41.0
Phvul.007G254300 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 4.0e-08 62.4 161 46.0
QL07p001449 Quercus lobata HOM05D000009 ORTHO05D000008 4.0e-08 62.4 156 56.4
Dinv01265 Davidia involucrata HOM05D000009 ORTHO05D000008 5.2e-08 62.0 115 34.8
Glyma.19G137200 Glycine max HOM05D000009 ORTHO05D000008 5.2e-08 62.0 164 44.5
Manes.09G025400 Manihot esculenta HOM05D000009 ORTHO05D000008 5.2e-08 62.0 134 48.5
TWI38G2259 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 5.2e-08 62.0 128 51.6
CANSAT80G0041 Cannabis sativa HOM05D000009 ORTHO05D000008 6.8e-08 61.6 158 39.2
Phvul.001G134100 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 6.8e-08 61.6 85 41.2
Prupe.7G062200 Prunus persica HOM05D000009 ORTHO05D000008 6.8e-08 61.6 130 52.3
TWI38G2376 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 6.8e-08 61.6 129 53.5
Eucgr.K02012 Eucalyptus grandis HOM05D000009 ORTHO05D000008 8.9e-08 61.2 166 36.1
Glyma.19G139950 Glycine max HOM05D000009 ORTHO05D000008 8.9e-08 61.2 85 38.8
MD14G1069100 Malus domestica HOM05D000009 ORTHO05D000008 8.9e-08 61.2 130 53.1
QL02p047554 Quercus lobata HOM05D000009 ORTHO05D000008 8.9e-08 61.2 126 50.8
CANSAT80G2800 Cannabis sativa HOM05D000009 ORTHO05D000008 1.2e-07 60.8 154 27.3
Glyma.19G139400 Glycine max HOM05D000009 ORTHO05D000008 1.2e-07 60.8 165 24.8
Eucgr.E03696 Eucalyptus grandis HOM05D000009 ORTHO05D000008 2.0e-07 60.1 167 27.5
QL07p001183 Quercus lobata HOM05D000009 ORTHO05D000008 2.0e-07 60.1 147 51.0
Eucgr.K02016 Eucalyptus grandis HOM05D000009 ORTHO05D000008 2.6e-07 59.7 166 35.5
Gohir.A13G197850 Gossypium hirsutum HOM05D000009 ORTHO05D000008 2.6e-07 59.7 171 47.4
Psat6g088040 Pisum sativum HOM05D000009 ORTHO05D000008 2.6e-07 59.7 188 41.5
Glyma.19G135500 Glycine max HOM05D000009 ORTHO05D000008 3.4e-07 59.3 164 43.3
EL10Ac5g12149 Beta vulgaris HOM05D000009 ORTHO05D000008 4.4e-07 58.9 95 38.9
COL.COLO4_21298 Corchorus olitorius HOM05D000009 ORTHO05D000008 4.4e-07 58.9 130 49.2
Medtr1g078490 Medicago truncatula HOM05D000009 ORTHO05D000008 4.4e-07 58.9 189 41.8
Prupe.7G062500 Prunus persica HOM05D000009 ORTHO05D000008 4.4e-07 58.9 130 50.0
QL07p001350 Quercus lobata HOM05D000009 ORTHO05D000008 4.4e-07 58.9 126 33.3
TWI38G0183 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 4.4e-07 58.9 126 51.6
TWI38G1934 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 4.4e-07 58.9 116 48.3
FvH4_1g23030 Fragaria vesca HOM05D000009 ORTHO05D000008 5.8e-07 58.5 84 39.3
VMungo0720G2327 Vigna mungo HOM05D000009 ORTHO05D000008 5.8e-07 58.5 193 40.9
Ciclev10006742m.g Citrus clementina HOM05D000009 ORTHO05D000008 7.6e-07 58.2 127 37.8
Ciclev10010865m.g Citrus clementina HOM05D000009 ORTHO05D000008 7.6e-07 58.2 127 37.8
Glyma.19G134100 Glycine max HOM05D000009 ORTHO05D000008 7.6e-07 58.2 164 42.7
Glyma.19G135800 Glycine max HOM05D000009 ORTHO05D000008 7.6e-07 58.2 169 40.2
TWI09G0026 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 7.6e-07 58.2 131 51.1
TWI38G1544 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 7.6e-07 58.2 109 50.5
Eucgr.K01715 Eucalyptus grandis HOM05D000009 ORTHO05D000008 9.9e-07 57.8 166 35.5
Lj9C293G5 Lonicera japonica HOM05D000009 ORTHO05D000008 9.9e-07 57.8 180 37.2
Psat5g055320 Pisum sativum HOM05D000009 ORTHO05D000008 9.9e-07 57.8 168 38.7
RcHm_v2.0_Chr5g0009011 Rosa chinensis HOM05D000009 ORTHO05D000008 9.9e-07 57.8 161 46.0
Cpa.g.sc92.43 Carica papaya HOM05D000009 ORTHO05D000008 1.3e-06 57.4 161 46.6
Lj9P283T22 Lonicera japonica HOM05D000009 ORTHO05D000008 1.3e-06 57.4 174 39.7
CANSAT54G1012 Cannabis sativa HOM05D000009 ORTHO05D000008 1.7e-06 57.0 127 52.0
AUR62018740 Chenopodium quinoa HOM05D000009 ORTHO05D000008 1.7e-06 57.0 86 41.9
AUR62026092 Chenopodium quinoa HOM05D000009 ORTHO05D000008 1.7e-06 57.0 84 44.0
Glyma.19G113450 Glycine max HOM05D000009 ORTHO05D016233 1.7e-06 57.0 169 37.9
Gohir.A04G021100 Gossypium hirsutum HOM05D000009 ORTHO05D000008 1.7e-06 57.0 171 47.4
EL10Ac9g22787 Beta vulgaris HOM05D000009 ORTHO05D000008 2.2e-06 56.6 177 41.8
TWI38G1123 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 2.2e-06 56.6 128 53.1
Haze_19479 Corylus avellana HOM05D000009 ORTHO05D000008 2.9e-06 56.2 107 33.6
Peaxi162Scf00493g00024 Petunia axillaris HOM05D000009 ORTHO05D000008 2.9e-06 56.2 161 46.0
AUR62024505 Chenopodium quinoa HOM05D000009 ORTHO05D000008 3.8e-06 55.8 84 41.7
Eucgr.A02365 Eucalyptus grandis HOM05D000009 ORTHO05D000008 3.8e-06 55.8 130 46.9
Manes.09G025861 Manihot esculenta HOM05D000009 ORTHO05D000008 3.8e-06 55.8 107 33.6
TWI38G1110 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 4.9e-06 55.5 126 44.4
Dinv23960 Davidia involucrata HOM05D000009 ORTHO05D016233 6.4e-06 55.1 194 43.3
Glyma.19G085550 Glycine max HOM05D000009 ORTHO05D000008 6.4e-06 55.1 88 35.2
Phvul.007G254400 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 6.4e-06 55.1 207 34.3
CAN.G676.65 Capsicum annuum HOM05D000009 ORTHO05D000008 8.4e-06 54.7 110 57.3
CiPaw.10G097000 Carya illinoinensis HOM05D000009 ORTHO05D000008 8.4e-06 54.7 103 35.0
AUR62015510 Chenopodium quinoa HOM05D000009 ORTHO05D011762 8.4e-06 54.7 90 40.0
Ca_05421_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 8.4e-06 54.7 161 32.3
Manes.09G025646 Manihot esculenta HOM05D000009 ORTHO05D000008 8.4e-06 54.7 98 34.7
Peaxi162Scf00493g00116 Petunia axillaris HOM05D000009 ORTHO05D000008 8.4e-06 54.7 126 50.8
TWI81G0469 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 8.4e-06 54.7 69 40.6
VMungo0720G3017 Vigna mungo HOM05D000009 ORTHO05D000008 8.4e-06 54.7 163 31.3
VMungo1383G3390 Vigna mungo HOM05D000009 ORTHO05D000008 8.4e-06 54.7 170 41.8


User provided reference genes

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