Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p028045 Quercus lobata HOM05D005379 ORTHO05D006661 5.6e-161 570.9 284 100.0
Cfa013572 Carpinus fangiana HOM05D005379 ORTHO05D006661 5.3e-127 458.0 280 82.1
GSVIVG01013977001 Vitis vinifera HOM05D005379 ORTHO05D006661 2.9e-117 425.6 285 74.4
TAR375G0328 Trochodendron aralioides HOM05D005379 ORTHO05D006661 3.2e-116 422.2 280 74.6
Prupe.2G273100 Prunus persica HOM05D005379 ORTHO05D006661 8.0e-115 417.5 284 72.9
Lalb_Chr05g0217631 Lupinus albus HOM05D005379 ORTHO05D006661 2.3e-114 416.0 286 73.8
Thecc.03G149400 Theobroma cacao HOM05D005379 ORTHO05D006661 1.2e-113 413.7 278 73.4
CANSAT56G1299 Cannabis sativa HOM05D005379 ORTHO05D006661 1.5e-113 413.3 289 72.7
CANSAT56G0595 Cannabis sativa HOM05D005379 ORTHO05D006661 2.6e-113 412.5 289 72.7
MD01G1177600 Malus domestica HOM05D005379 ORTHO05D006661 2.2e-112 409.5 283 72.4
MD07G1249400 Malus domestica HOM05D005379 ORTHO05D006661 1.1e-111 407.1 284 71.8
Glyma.15G056200 Glycine max HOM05D005379 ORTHO05D006661 5.4e-111 404.8 283 72.4
CSS0027857 Camellia sinensis var. sinensis HOM05D005379 ORTHO05D006661 3.5e-110 402.1 284 71.1
MBI04_g36330_MAGBIO Magnolia biondii HOM05D005379 ORTHO05D006661 3.5e-110 402.1 281 71.5
TWI23G1062 Tripterygium wilfordii HOM05D005379 ORTHO05D006661 3.5e-110 402.1 281 71.9
Gohir.A07G043200 Gossypium hirsutum HOM05D005379 ORTHO05D006661 4.5e-110 401.7 278 71.2
MBI04_g38758_MAGBIO Magnolia biondii HOM05D005379 ORTHO05D006661 4.5e-110 401.7 281 71.9
Rhsim03G0161700 Rhododendron simsii HOM05D005379 ORTHO05D006661 4.5e-110 401.7 305 68.5
FvH4_7g27000 Fragaria vesca HOM05D005379 ORTHO05D006661 5.9e-110 401.4 277 71.1
Glyma.08G176800 Glycine max HOM05D005379 ORTHO05D006661 3.8e-109 398.7 281 70.8
Sc18g0007310 Simmondsia chinensis HOM05D005379 ORTHO05D006661 6.5e-109 397.9 289 67.1
CiPaw.08G041400 Carya illinoinensis HOM05D005379 ORTHO05D006661 8.5e-109 397.5 225 88.0
Eucgr.K00130 Eucalyptus grandis HOM05D005379 ORTHO05D006661 8.5e-109 397.5 291 69.1
CsaV3_6G041840 Cucumis sativus L. HOM05D005379 ORTHO05D006661 1.1e-108 397.1 286 70.3
Hund11852 Selenicereus undatus HOM05D005379 ORTHO05D006661 1.9e-108 396.4 291 68.0
Gorai.001G050800 Gossypium raimondii HOM05D005379 ORTHO05D006661 3.2e-108 395.6 279 71.0
Ciclev10005581m.g Citrus clementina HOM05D005379 ORTHO05D006661 5.5e-108 394.8 278 71.2
Manes.14G038300 Manihot esculenta HOM05D005379 ORTHO05D006661 1.6e-107 393.3 294 68.0
MELO3C008037.2 Cucumis melo HOM05D005379 ORTHO05D006661 2.1e-107 392.9 286 69.2
VMungo0540G0153 Vigna mungo HOM05D005379 ORTHO05D006661 2.1e-107 392.9 283 70.0
ClCG01G015600 Citrullus lanatus HOM05D005379 ORTHO05D006661 3.6e-107 392.1 286 69.2
Actinidia31774 Actinidia chinensis HOM05D005379 ORTHO05D006661 8.0e-107 391.0 275 69.8
EL10Ac3g05878 Beta vulgaris HOM05D005379 ORTHO05D006661 8.0e-107 391.0 282 68.1
Potri.003G151600 Populus trichocarpa HOM05D005379 ORTHO05D006661 1.0e-106 390.6 283 69.6
AUR62002241 Chenopodium quinoa HOM05D005379 ORTHO05D006661 1.8e-106 389.8 284 68.7
Sopen06g010750 Solanum pennellii HOM05D005379 ORTHO05D006661 4.0e-106 388.7 278 71.2
TAR374G0427 Trochodendron aralioides HOM05D005379 ORTHO05D006661 4.0e-106 388.7 265 72.5
CDE11G0172 Ceratophyllum demersum HOM05D005379 ORTHO05D006661 6.8e-106 387.9 287 66.6
Lj3g0027387 Lotus japonicus HOM05D005379 ORTHO05D006661 6.8e-106 387.9 282 69.1
Solyc06g034100.4 Solanum lycopersicum HOM05D005379 ORTHO05D006661 6.8e-106 387.9 277 70.8
AUR62015453 Chenopodium quinoa HOM05D005379 ORTHO05D006661 1.2e-105 387.1 284 68.3
Sed0000219 Sechium edule HOM05D005379 ORTHO05D006661 1.5e-105 386.7 287 68.6
Dinv06588 Davidia involucrata HOM05D005379 ORTHO05D006661 3.4e-105 385.6 263 73.8
Phvul.006G202400 Phaseolus vulgaris HOM05D005379 ORTHO05D006661 3.4e-105 385.6 283 68.9
PGR004G0100 Punica granatum HOM05D005379 ORTHO05D006661 1.3e-104 383.6 284 70.4
PSO063G0621 Papaver somniferum HOM05D005379 ORTHO05D006661 2.2e-104 382.9 284 68.3
Hund04565 Selenicereus undatus HOM05D005379 ORTHO05D006661 3.7e-104 382.1 283 68.2
Psat1g214640 Pisum sativum HOM05D005379 ORTHO05D006661 1.1e-103 380.6 281 67.3
Medtr2g009320 Medicago truncatula HOM05D005379 ORTHO05D006661 5.4e-103 378.3 287 66.9
Ah.13g071160 Amaranthus hybridus HOM05D005379 ORTHO05D006661 7.7e-102 374.4 284 65.5
THA.LOC104811535 Tarenaya hassleriana HOM05D005379 ORTHO05D006661 7.7e-102 374.4 285 66.3
vmacro06833 Vaccinium macrocarpon HOM05D005379 ORTHO05D006661 7.7e-102 374.4 252 74.6
Haze_22191 Corylus avellana HOM05D005379 ORTHO05D006661 1.3e-101 373.6 336 62.5
RcHm_v2.0_Chr1g0373791 Rosa chinensis HOM05D005379 ORTHO05D006661 2.3e-101 372.9 253 69.2
Ca_00152_v3 Cicer arietinum L. HOM05D005379 ORTHO05D006661 2.9e-101 372.5 281 66.9
FAN06G0815 Fragaria x ananassa HOM05D005379 ORTHO05D006661 8.6e-101 370.9 278 66.9
Thhalv10014342m.g Eutrema salsugineum HOM05D005379 ORTHO05D006661 1.1e-100 370.5 277 65.7
PSO782G5074 Papaver somniferum HOM05D005379 ORTHO05D006661 2.5e-100 369.4 314 62.1
MSTRG.8845 Avicennia marina HOM05D005379 ORTHO05D006661 1.2e-99 367.1 277 65.7
arahy.Tifrunner.gnm1.ann1.3L844V Arachis hypogaea HOM05D005379 ORTHO05D006661 6.1e-99 364.8 284 67.6
Nitab4.5_0002211g0080 Nicotiana tabacum HOM05D005379 ORTHO05D006661 8.0e-99 364.4 284 65.5
Migut.F00521 Erythranthe guttata HOM05D005379 ORTHO05D006661 3.0e-98 362.5 277 65.7
Lj1A584T32 Lonicera japonica HOM05D005379 ORTHO05D006661 4.0e-98 362.1 250 71.2
Nitab4.5_0010756g0010 Nicotiana tabacum HOM05D005379 ORTHO05D006661 9.8e-97 357.5 283 65.0
AT5G51220 Arabidopsis thaliana HOM05D005379 ORTHO05D006661 1.3e-96 357.1 283 61.8
CARHR256800 Cardamine hirsuta HOM05D005379 ORTHO05D006661 1.3e-96 357.1 245 69.8
Lsat_1_v5_gn_8_9541 Lactuca sativa HOM05D005379 ORTHO05D006661 4.9e-96 355.1 284 61.3
FAN10G0849 Fragaria x ananassa HOM05D005379 ORTHO05D006661 8.3e-96 354.4 244 70.1
Sp6g13420 Schrenkiella parvula HOM05D005379 ORTHO05D006661 8.3e-96 354.4 279 62.7
BcaC04g20721 Brassica carinata HOM05D005379 ORTHO05D006661 1.4e-95 353.6 279 62.4
BcaB08g35480 Brassica carinata HOM05D005379 ORTHO05D006661 1.8e-95 353.2 280 63.2
Carub.0008s1126 Capsella rubella HOM05D005379 ORTHO05D006661 1.8e-95 353.2 280 63.6
ATR0057G081 Amborella trichopoda HOM05D005379 ORTHO05D006661 2.4e-95 352.8 273 64.1
Cc02_g04670 Coffea canephora HOM05D005379 ORTHO05D006661 9.2e-95 350.9 286 64.7
FAN03G3283 Fragaria x ananassa HOM05D005379 ORTHO05D006661 2.0e-94 349.7 244 68.9
arahy.Tifrunner.gnm1.ann1.8RST7H Arachis hypogaea HOM05D005379 ORTHO05D006661 3.5e-94 349.0 284 65.5
ECA233G0107 Erigeron canadensis HOM05D003586 ORTHO05D004036 1.0e-93 347.4 288 59.4
Nitab4.5_0000262g0030 Nicotiana tabacum HOM05D005379 ORTHO05D006661 3.0e-93 345.9 246 69.9
Aa31LG3G7760 Aethionema arabicum HOM05D005379 ORTHO05D006661 2.5e-92 342.8 271 64.2
CAN.G174.21 Capsicum annuum HOM05D005379 ORTHO05D006661 2.1e-91 339.7 247 68.8
Os07g0490300 Oryza sativa ssp. japonica HOM05D005379 ORTHO05D006661 2.8e-91 339.3 223 73.5
Nitab4.5_0000448g0020 Nicotiana tabacum HOM05D005379 ORTHO05D006661 3.6e-91 339.0 246 69.9
Oeu042535.3 Olea europaea HOM05D005379 ORTHO05D006661 1.0e-90 337.4 216 72.2
Sabra03G0109800 Salix brachista HOM05D005379 ORTHO05D006661 3.1e-90 335.9 252 67.5
COL.COLO4_37344 Corchorus olitorius HOM05D003586 ORTHO05D004036 5.2e-90 335.1 225 72.0
AL8G25500 Arabidopsis lyrata HOM05D005379 ORTHO05D006661 2.0e-89 333.2 218 71.6
HanXRQChr08g0222701 Helianthus annuus HOM05D005379 ORTHO05D006661 1.1e-87 327.4 223 67.7
DCAR_018078 Daucus carota HOM05D005379 ORTHO05D006661 1.9e-87 326.6 281 58.0
SalBow5G2200 Salvia bowleyana HOM05D005379 ORTHO05D006661 3.2e-87 325.9 320 54.7
HanXRQChr05g0139501 Helianthus annuus HOM05D005379 ORTHO05D006661 7.8e-86 321.2 224 66.1
SGA_v2.0_scaffold60G20811 Striga asiatica HOM05D005379 ORTHO05D006661 1.0e-85 320.9 308 56.5
Zm00001eb321690 Zea mays HOM05D005379 ORTHO05D006661 3.0e-85 319.3 220 70.0
ECA238G1883 Erigeron canadensis HOM05D005379 ORTHO05D006661 1.1e-84 317.4 291 56.7
SalBow7G1847 Salvia bowleyana HOM05D005379 ORTHO05D006661 2.5e-84 316.2 329 52.0
Hma1.2p1_0456F.1_g156820 Hydrangea macrophylla HOM05D005379 ORTHO05D006661 3.3e-84 315.8 263 60.8
HanXRQChr07g0205531 Helianthus annuus HOM05D005379 ORTHO05D006661 4.3e-84 315.5 230 64.8
Peaxi162Scf00304g01113 Petunia axillaris HOM05D005379 ORTHO05D006661 1.6e-83 313.5 225 69.3
HPP92_009947 Vanilla planifolia HOM05D005379 ORTHO05D006227 6.2e-83 311.6 249 63.5
A10p07900 Brassica napus HOM05D005379 ORTHO05D006661 1.5e-81 307.0 246 61.0
C09p39890 Brassica napus HOM05D005379 ORTHO05D006661 1.5e-81 307.0 246 61.0
BolC9t56888H Brassica oleracea HOM05D005379 ORTHO05D006661 1.5e-81 307.0 246 61.0
BraSC35t46008Z Brassica rapa HOM05D005379 ORTHO05D006661 1.5e-81 307.0 246 61.0
Gohir.D07G047600 Gossypium hirsutum HOM05D005379 ORTHO05D006661 1.3e-80 303.9 184 78.8
SalBow7G3941 Salvia bowleyana HOM05D005379 ORTHO05D006661 1.3e-80 303.9 246 61.4
Actinidia31671 Actinidia chinensis HOM05D005379 ORTHO05D006661 4.9e-80 302.0 285 58.2
Cpa.g.sc13.263 Carica papaya HOM05D005379 ORTHO05D006661 8.6e-77 291.2 224 65.2
Peaxi162Scf00167g00730 Petunia axillaris HOM05D005379 ORTHO05D006661 7.3e-76 288.1 169 79.3
TPR.G9516 Trifolium pratense HOM05D005379 ORTHO05D006661 1.6e-70 270.4 288 54.2
Oeu022464.1 Olea europaea HOM05D005379 ORTHO05D006661 2.1e-70 270.0 166 75.9
Zm00001eb105230 Zea mays HOM05D005379 ORTHO05D006661 1.3e-69 267.3 198 66.7
Manes.06G131601 Manihot esculenta HOM05D005379 ORTHO05D006661 7.3e-68 261.5 251 57.4
AagrBONN_evm.TU.Sc2ySwM_228.472 Anthoceros agrestis HOM05D005379 ORTHO05D006661 2.5e-60 236.5 240 49.2
FAN06G1013 Fragaria x ananassa HOM05D005379 ORTHO05D006661 3.1e-58 229.6 154 72.7
CANSAT56G1106 Cannabis sativa HOM05D005379 ORTHO05D006661 4.0e-58 229.2 135 81.5
Pp3c8_7310 Physcomitrium patens HOM05D005379 ORTHO05D006661 3.4e-57 226.1 264 43.2
Mapoly0029s0089 Marchantia polymorpha HOM05D005379 ORTHO05D006661 1.7e-56 223.8 229 47.6
BcaB05g24017 Brassica carinata HOM05D005379 ORTHO05D006661 6.0e-54 215.3 249 49.4
CBR_g48514 Chara braunii HOM05D005379 ORTHO05D006661 3.6e-51 206.1 226 44.2
Lalb_Chr16g0382791 Lupinus albus HOM05D005379 ORTHO05D006661 6.4e-48 195.3 149 67.1
SMO361G0220 Selaginella moellendorffii HOM05D005379 ORTHO05D006661 5.1e-45 185.7 212 44.3
CANSAT56G1775 Cannabis sativa HOM05D005379 ORTHO05D006661 2.5e-44 183.3 106 79.2
unitig_0.g2509 Utricularia gibba HOM05D005379 ORTHO05D006661 2.5e-44 183.3 119 75.6
Dinv06594 Davidia involucrata HOM05D005379 ORTHO05D006661 3.3e-36 156.4 132 61.4
MCO01G548 Micromonas commoda HOM05D005379 ORTHO05D006661 2.5e-28 130.2 184 34.8
A02p12440 Brassica napus HOM05D005379 ORTHO05D006661 1.2e-25 121.3 101 59.4
BraA02t06308Z Brassica rapa HOM05D005379 ORTHO05D006661 1.0e-24 118.2 101 57.4
Ah.13g066320 Amaranthus hybridus HOM05D005379 ORTHO05D006661 2.5e-23 113.6 129 50.4
BcaC03g14620 Brassica carinata HOM05D005379 ORTHO05D006661 2.5e-23 113.6 82 62.2
Ah.13g066300 Amaranthus hybridus HOM05D005379 ORTHO05D006661 1.2e-22 111.3 119 51.3
Cre01.g052050 Chlamydomonas reinhardtii HOM05D005379 ORTHO05D006661 3.0e-21 106.7 188 33.5
HPP92_009967 Vanilla planifolia HOM05D005379 ORTHO05D006661 2.0e-20 104.0 81 61.7
Lalb_Chr16g0382801 Lupinus albus HOM05D005379 ORTHO05D006661 4.3e-20 102.8 91 60.4
BolC2t08192H Brassica oleracea HOM05D005379 ORTHO05D006661 6.3e-19 99.0 70 64.3
SEGI_00850 Sequoiadendron giganteum HOM05D005379 ORTHO05D006661 1.4e-10 71.2 47 70.2
CDE02G1103 Ceratophyllum demersum HOM05D005379 ORTHO05D006661 3.1e-10 70.1 49 73.5
HPP92_009968 Vanilla planifolia HOM05D005379 ORTHO05D006661 5.9e-09 65.9 37 75.7
RcHm_v2.0_Chr1g0373801 Rosa chinensis HOM05D005379 ORTHO05D006661 1.0e-08 65.1 37 86.5
Lj1A976T72 Lonicera japonica HOM05D005379 ORTHO05D006661 2.5e-07 60.5 76 44.7
C02p20560 Brassica napus HOM05D005379 ORTHO05D006661 3.2e-07 60.1 52 51.9


User provided reference genes

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