Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 1.3e-295 1018.8 475 100.0
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 1.0e-263 912.9 476 88.7
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 8.6e-263 909.8 475 88.2
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 6.1e-261 903.7 475 87.4
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 2.6e-259 898.3 475 87.4
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 5.7e-259 897.1 475 86.3
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 7.5e-259 896.7 475 87.2
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 7.5e-259 896.7 475 86.9
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 1.7e-258 895.6 475 86.9
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 2.2e-258 895.2 475 86.5
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 1.1e-257 892.9 475 86.5
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 1.4e-257 892.5 475 85.5
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 2.4e-257 891.7 475 86.9
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 9.2e-257 889.8 475 85.9
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 5.9e-256 887.1 475 86.1
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 1.0e-255 886.3 475 85.7
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 1.7e-255 885.6 476 85.9
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 3.0e-255 884.8 475 85.7
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 3.0e-255 884.8 476 85.9
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 3.0e-255 884.8 476 85.9
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 3.0e-255 884.8 475 86.3
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 3.9e-255 884.4 475 85.9
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 5.0e-255 884.0 475 84.6
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 5.0e-255 884.0 476 85.9
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 6.6e-255 883.6 476 85.9
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 8.6e-255 883.2 475 85.9
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 1.5e-254 882.5 475 85.7
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 2.5e-254 881.7 476 85.7
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 3.3e-254 881.3 476 85.3
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 4.3e-254 880.9 475 85.7
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 5.6e-254 880.6 481 85.2
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 7.3e-254 880.2 476 85.7
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 8.0e-253 876.7 475 84.2
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 1.0e-252 876.3 475 84.2
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 1.0e-252 876.3 475 85.5
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 1.8e-252 875.5 475 85.3
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 6.8e-252 873.6 475 84.0
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 3.4e-251 871.3 477 84.9
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 2.4e-249 865.1 475 82.9
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 5.4e-249 864.0 475 84.0
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 1.6e-248 862.4 475 82.5
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 1.0e-247 859.8 475 82.5
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 1.0e-247 859.8 475 82.5
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 2.3e-247 858.6 475 82.5
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 3.9e-247 857.8 475 82.7
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.1e-246 856.3 475 83.8
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 2.5e-246 855.1 475 81.5
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 4.7e-245 850.9 475 83.4
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 8.1e-245 850.1 477 80.9
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 1.4e-244 849.4 475 82.1
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 3.4e-243 844.7 475 81.1
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 7.5e-243 843.6 475 80.6
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 1.7e-242 842.4 475 81.1
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 1.7e-242 842.4 475 80.6
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 3.7e-242 841.3 475 79.8
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 4.9e-242 840.9 475 82.5
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 6.4e-242 840.5 475 80.8
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 6.4e-242 840.5 475 81.1
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 6.0e-240 833.9 475 80.2
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 7.8e-240 833.6 476 80.3
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 3.0e-239 831.6 475 80.2
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 3.3e-238 828.2 475 79.8
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 3.3e-238 828.2 473 79.3
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 4.3e-238 827.8 474 78.9
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 5.6e-238 827.4 476 79.0
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 6.8e-236 820.5 502 75.5
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 8.9e-236 820.1 475 80.6
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 1.2e-235 819.7 475 80.6
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 1.7e-234 815.8 471 79.8
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 1.7e-234 815.8 475 77.7
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 6.4e-234 813.9 475 78.7
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 1.1e-233 813.1 475 77.7
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 3.2e-233 811.6 475 78.7
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 1.6e-232 809.3 459 80.6
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 1.0e-231 806.6 474 78.1
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 6.6e-231 803.9 475 79.6
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 6.6e-231 803.9 513 74.3
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 3.1e-228 795.0 475 76.6
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 3.2e-225 785.0 475 77.9
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 1.6e-221 772.7 475 75.2
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 5.3e-220 767.7 473 73.4
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 9.0e-220 766.9 471 74.1
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 3.9e-207 724.9 515 67.4
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 4.0e-204 714.9 474 72.4
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 5.3e-204 714.5 475 70.7
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 8.5e-194 680.6 405 76.8
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 4.2e-193 678.3 476 64.9
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 3.9e-191 671.8 357 88.5
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 5.3e-188 661.4 467 63.4
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.7e-186 656.4 355 85.6
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 2.9e-186 655.6 467 63.6
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 6.5e-186 654.4 355 85.6
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 8.5e-186 654.1 354 85.9
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 4.2e-185 651.7 468 63.2
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 3.9e-183 645.2 358 84.9
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 3.9e-183 645.2 358 84.9
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.5e-182 643.3 354 85.0
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 9.7e-182 640.6 470 61.3
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 1.9e-177 626.3 339 85.5
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 9.7e-174 614.0 354 80.8
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 3.7e-173 612.1 353 80.2
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.4e-172 610.1 296 93.9
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 1.0e-167 594.0 353 77.9
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 2.1e-160 569.7 463 55.3
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 7.7e-155 551.2 303 83.5
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.8e-152 542.7 306 82.7
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 8.0e-152 541.2 301 83.4
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 1.5e-150 537.0 353 73.9
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 6.3e-149 531.6 307 79.8
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 2.3e-146 523.1 277 85.6
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 9.5e-137 491.1 354 62.4
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 3.2e-132 476.1 292 75.3
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 1.9e-108 397.1 467 41.3
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 1.9e-100 370.5 488 38.5
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 3.2e-76 290.0 164 76.8
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.3e-58 230.7 110 94.5
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.3e-58 230.7 110 94.5
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 5.2e-58 229.6 110 93.6
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 1.7e-53 214.5 163 62.6
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 1.5e-41 174.9 99 83.8
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 1.9e-12 78.2 40 85.0


User provided reference genes

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