Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 3.1e-72 275.0 138 100.0
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 7.0e-48 194.1 138 76.1
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 2.4e-40 169.1 135 66.7
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 3.1e-40 168.7 135 65.9
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 3.1e-40 168.7 135 68.1
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 8.5e-38 160.6 138 64.5
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 8.5e-38 160.6 138 64.5
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 8.5e-38 160.6 138 64.5
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 1.1e-37 160.2 151 60.9
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 1.5e-37 159.8 138 64.5
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 1.5e-37 159.8 138 58.7
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 3.2e-37 158.7 136 64.0
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 3.2e-37 158.7 136 65.4
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 5.5e-37 157.9 137 62.0
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 5.5e-37 157.9 131 64.1
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 7.2e-37 157.5 139 61.9
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 1.6e-36 156.4 136 64.7
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 2.1e-36 156.0 131 64.1
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 2.7e-36 155.6 136 63.2
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 2.7e-36 155.6 138 59.4
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 6.1e-36 154.5 138 57.2
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 1.8e-35 152.9 132 59.8
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 1.8e-35 152.9 138 59.4
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 3.0e-35 152.1 137 56.2
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 8.8e-35 150.6 137 58.4
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 8.8e-35 150.6 137 59.9
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 1.5e-34 149.8 137 60.6
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 1.5e-34 149.8 137 57.7
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 1.5e-34 149.8 131 62.6
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 2.6e-34 149.1 137 60.6
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 3.4e-34 148.7 134 62.7
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 3.4e-34 148.7 137 57.7
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 4.4e-34 148.3 136 59.6
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 5.7e-34 147.9 135 58.5
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 9.8e-34 147.1 135 59.3
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 1.3e-33 146.7 131 55.7
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 1.7e-33 146.4 135 57.8
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 1.7e-33 146.4 136 58.8
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 1.7e-33 146.4 136 58.8
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 2.8e-33 145.6 137 55.5
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 2.8e-33 145.6 141 58.2
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 3.7e-33 145.2 135 57.0
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 3.7e-33 145.2 135 58.5
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 4.9e-33 144.8 132 57.6
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 4.9e-33 144.8 132 57.6
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 4.9e-33 144.8 132 57.6
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 6.3e-33 144.4 137 54.7
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 8.3e-33 144.1 135 57.0
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 8.3e-33 144.1 133 59.4
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 1.1e-32 143.7 135 57.0
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 1.1e-32 143.7 132 57.6
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 1.1e-32 143.7 135 57.8
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 1.4e-32 143.3 135 57.0
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 3.1e-32 142.1 138 55.8
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 4.1e-32 141.7 135 56.3
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 4.1e-32 141.7 137 53.3
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 4.1e-32 141.7 137 53.3
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 4.1e-32 141.7 130 57.7
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 5.4e-32 141.4 130 57.7
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 1.2e-31 140.2 135 55.6
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 1.6e-31 139.8 87 78.2
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 1.6e-31 139.8 130 57.7
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 1.6e-31 139.8 137 54.0
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 2.0e-31 139.4 129 58.1
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 2.7e-31 139.0 130 57.7
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 3.5e-31 138.7 131 53.4
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 7.7e-31 137.5 135 55.6
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 1.3e-30 136.7 130 56.9
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 1.3e-30 136.7 129 57.4
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 1.3e-30 136.7 132 56.1
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 1.7e-30 136.3 88 75.0
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 6.6e-30 134.4 93 71.0
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 8.6e-30 134.0 88 76.1
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 1.5e-29 133.3 85 77.6
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 2.5e-29 132.5 98 71.4
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 3.3e-29 132.1 134 50.7
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 7.2e-29 131.0 130 53.1
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 7.2e-29 131.0 131 51.1
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 2.1e-28 129.4 127 50.4
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 3.6e-28 128.6 124 54.8
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 3.6e-28 128.6 86 72.1
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 4.7e-28 128.3 130 54.6
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 1.4e-27 126.7 132 53.8
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 1.4e-27 126.7 132 53.8
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 1.8e-27 126.3 127 53.5
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 2.3e-27 125.9 124 55.6
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 5.2e-27 124.8 124 54.8
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 5.2e-27 124.8 124 54.0
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 1.5e-26 123.2 124 54.0
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 2.0e-26 122.9 132 51.5
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 2.0e-26 122.9 123 51.2
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 4.4e-26 121.7 126 54.8
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 2.2e-25 119.4 127 50.4
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 3.7e-25 118.6 131 51.1
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 3.7e-25 118.6 131 51.1
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 2.4e-24 115.9 86 68.6
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 5.4e-24 114.8 124 49.2
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 7.0e-24 114.4 101 58.4
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 2.0e-23 112.8 97 60.8
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 5.9e-23 111.3 121 47.9
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 1.7e-22 109.8 77 70.1
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 1.1e-21 107.1 75 65.3
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 1.9e-21 106.3 77 66.2
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 1.6e-20 103.2 133 45.1
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 2.8e-20 102.4 74 63.5
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 1.8e-19 99.8 121 44.6
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 1.3e-17 93.6 69 63.8
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 8.3e-17 90.9 124 41.1
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 1.9e-16 89.7 73 56.2
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 8.6e-14 80.9 53 79.2
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 7.3e-13 77.8 88 48.9
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 7.3e-13 77.8 86 51.2
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 4.0e-11 72.0 85 47.1
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 7.1e-08 61.2 52 55.8
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 9.2e-08 60.8 84 45.2
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 1.2e-07 60.5 51 58.8
Lj3C809T12 Lonicera japonica HOM05D000039 ORTHO05D029999 5.1e-06 55.1 53 49.1


User provided reference genes

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