Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p024777 Quercus lobata HOM05D001216 ORTHO05D008355 1.0e-142 510.0 246 100.0
Cfa015879 Carpinus fangiana HOM05D001216 ORTHO05D008355 4.0e-86 322.0 237 69.6
MD07G1306500 Malus domestica HOM05D001216 ORTHO05D008355 1.3e-81 307.0 236 66.5
Thecc.05G209300 Theobroma cacao HOM05D001216 ORTHO05D008355 1.7e-81 306.6 237 65.8
Manes.09G124400 Manihot esculenta HOM05D001216 ORTHO05D008355 1.2e-79 300.4 237 63.7
Duzib106G0833 Durio zibethinus HOM05D001216 ORTHO05D008355 1.6e-79 300.1 237 65.8
COL.COLO4_06399 Corchorus olitorius HOM05D001216 ORTHO05D008355 3.6e-79 298.9 237 63.3
Ciclev10018854m.g Citrus clementina HOM05D001216 ORTHO05D008355 1.0e-78 297.4 236 65.3
Gorai.013G181000 Gossypium raimondii HOM05D001216 ORTHO05D008355 1.4e-78 297.0 236 64.4
Gohir.D13G160100 Gossypium hirsutum HOM05D001216 ORTHO05D008355 1.8e-78 296.6 236 64.4
Gohir.A13G155300 Gossypium hirsutum HOM05D001216 ORTHO05D008355 1.2e-77 293.9 236 63.6
FAN03G0335 Fragaria x ananassa HOM05D001216 ORTHO05D008355 1.5e-77 293.5 236 64.4
Potri.013G089000 Populus trichocarpa HOM05D001216 ORTHO05D008355 7.5e-77 291.2 237 63.7
FAN10G1381 Fragaria x ananassa HOM05D001216 ORTHO05D008355 9.8e-77 290.8 236 64.4
Eucgr.K00092 Eucalyptus grandis HOM05D001216 ORTHO05D008355 1.3e-76 290.4 237 62.9
Prupe.2G324500 Prunus persica HOM05D001216 ORTHO05D008355 2.2e-76 289.7 236 64.8
CANSAT21G1267 Cannabis sativa HOM05D001216 ORTHO05D008355 2.8e-76 289.3 237 63.3
FAN01G2135 Fragaria x ananassa HOM05D001216 ORTHO05D008355 4.8e-76 288.5 235 63.8
RcHm_v2.0_Chr1g0383931 Rosa chinensis HOM05D001216 ORTHO05D008355 4.8e-76 288.5 236 63.1
PGR142G1409 Punica granatum HOM05D001216 ORTHO05D008355 6.3e-76 288.1 238 62.6
Dinv29167 Davidia involucrata HOM05D001216 ORTHO05D008355 1.8e-75 286.6 237 63.3
GSVIVG01024422001 Vitis vinifera HOM05D001216 ORTHO05D008355 3.1e-75 285.8 247 61.9
Atru.chr12.1986 Acer truncatum HOM05D001216 ORTHO05D008355 4.1e-75 285.4 237 63.7
arahy.Tifrunner.gnm1.ann1.4MFR3H Arachis hypogaea HOM05D001216 ORTHO05D008355 2.7e-74 282.7 234 61.5
FvH4_3g43881 Fragaria vesca HOM05D001216 ORTHO05D008355 1.3e-73 280.4 233 62.7
Ca_24450_v3 Cicer arietinum L. HOM05D001216 ORTHO05D008355 6.5e-73 278.1 238 60.5
Glyma.01G229200 Glycine max HOM05D001216 ORTHO05D008355 8.5e-73 277.7 237 61.6
Lj3C889T5 Lonicera japonica HOM05D001216 ORTHO05D008355 1.1e-72 277.3 243 60.9
LjContig00222g0021656 Lotus japonicus HOM05D001216 ORTHO05D008355 1.1e-72 277.3 237 60.3
Phvul.002G038200 Phaseolus vulgaris HOM05D001216 ORTHO05D008355 1.9e-72 276.6 237 60.3
VMungo1215G2356 Vigna mungo HOM05D001216 ORTHO05D008355 1.2e-71 273.9 237 60.3
Glyma.11G012000 Glycine max HOM05D001216 ORTHO05D008355 1.6e-71 273.5 237 60.8
Lalb_Chr16g0376611 Lupinus albus HOM05D001216 ORTHO05D008355 3.6e-71 272.3 237 59.9
ClCG10G009060 Citrullus lanatus HOM05D001216 ORTHO05D008355 8.0e-71 271.2 237 60.3
Nn1g01970 Nelumbo nucifera HOM05D001216 ORTHO05D008355 1.0e-70 270.8 243 59.7
Sed0005129 Sechium edule HOM05D001216 ORTHO05D008355 1.8e-70 270.0 238 60.5
Psat0s769g0040 Pisum sativum HOM05D001216 ORTHO05D008355 3.0e-70 269.2 237 58.2
TPR.G37925 Trifolium pratense HOM05D001216 ORTHO05D008355 3.0e-70 269.2 237 56.5
Hma1.2p1_1235F.1_g269080 Hydrangea macrophylla HOM05D001216 ORTHO05D008355 4.0e-70 268.9 239 61.5
Medtr5g007870 Medicago truncatula HOM05D001216 ORTHO05D008355 4.0e-70 268.9 237 57.0
vmacro06504 Vaccinium macrocarpon HOM05D001216 ORTHO05D008355 5.2e-70 268.5 244 61.1
MELO3C024870.2 Cucumis melo HOM05D001216 ORTHO05D008355 1.2e-69 267.3 238 58.8
CsaV3_4G008710 Cucumis sativus L. HOM05D001216 ORTHO05D008355 2.0e-69 266.5 238 58.8
Actinidia34302 Actinidia chinensis HOM05D001216 ORTHO05D008355 9.8e-69 264.2 243 58.8
Oeu061067.1 Olea europaea HOM05D001216 ORTHO05D008355 9.8e-69 264.2 240 59.6
Cc02_g00370 Coffea canephora HOM05D001216 ORTHO05D008355 1.3e-68 263.8 243 57.6
Actinidia08740 Actinidia chinensis HOM05D001216 ORTHO05D008355 6.3e-68 261.5 243 58.8
CAN.G303.74 Capsicum annuum HOM05D001216 ORTHO05D008355 2.4e-67 259.6 242 57.0
MBI04_g37552_MAGBIO Magnolia biondii HOM05D001216 ORTHO05D008355 4.1e-67 258.8 242 58.3
Peaxi162Scf00745g00860 Petunia axillaris HOM05D001216 ORTHO05D008355 7.0e-67 258.1 243 56.0
CSS0049591 Camellia sinensis var. sinensis HOM05D001216 ORTHO05D008355 1.2e-66 257.3 243 58.8
CSS0014281 Camellia sinensis var. sinensis HOM05D001216 ORTHO05D008355 1.6e-66 256.9 243 58.4
MSTRG.8578 Avicennia marina HOM05D001216 ORTHO05D008355 2.0e-66 256.5 243 56.4
Nitab4.5_0005081g0010 Nicotiana tabacum HOM05D001216 ORTHO05D008355 2.0e-66 256.5 243 56.0
Rhsim03G0220900 Rhododendron simsii HOM05D001216 ORTHO05D008355 2.0e-66 256.5 241 59.3
Solyc03g096900.4 Solanum lycopersicum HOM05D001216 ORTHO05D008355 3.5e-66 255.8 243 56.8
Sopen03g027650 Solanum pennellii HOM05D001216 ORTHO05D008355 3.5e-66 255.8 243 56.8
SGA_v2.0_scaffold59G20777 Striga asiatica HOM05D001216 ORTHO05D008355 1.7e-65 253.4 240 56.7
SalBow2G2269 Salvia bowleyana HOM05D001216 ORTHO05D008355 5.0e-65 251.9 241 56.0
HanXRQChr14g0462961 Helianthus annuus HOM05D001216 ORTHO05D008355 7.3e-64 248.1 242 56.2
DCAR_010546 Daucus carota HOM05D001216 ORTHO05D008355 1.2e-63 247.3 242 55.4
Nitab4.5_0000021g0450 Nicotiana tabacum HOM05D001216 ORTHO05D008355 3.6e-63 245.7 239 54.8
Sc25g0001170 Simmondsia chinensis HOM05D001216 ORTHO05D008355 4.7e-63 245.4 242 57.4
ATR0829G059 Amborella trichopoda HOM05D001216 ORTHO05D008355 1.0e-62 244.2 242 53.7
Lsat_1_v5_gn_2_135361 Lactuca sativa HOM05D001216 ORTHO05D008355 1.8e-62 243.4 248 54.0
ECA238G0596 Erigeron canadensis HOM05D001216 ORTHO05D008355 3.0e-62 242.7 243 56.0
Sabra13G0069600 Salix brachista HOM05D001216 ORTHO05D008355 3.0e-62 242.7 159 77.4
Migut.F00951 Erythranthe guttata HOM05D001216 ORTHO05D008355 8.9e-62 241.1 244 52.9
arahy.Tifrunner.gnm1.ann1.LQ97JF Arachis hypogaea HOM05D001216 ORTHO05D008355 4.4e-61 238.8 210 58.1
Aqoxy7G00876 Aquilegia oxysepala HOM05D001216 ORTHO05D008355 1.3e-60 237.3 244 53.3
unitig_52.g16851 Utricularia gibba HOM05D001216 ORTHO05D008355 1.1e-59 234.2 243 53.9
EL10Ac3g05091 Beta vulgaris HOM05D001216 ORTHO05D008355 1.4e-59 233.8 242 52.1
Os02g0699400 Oryza sativa ssp. japonica HOM05D001216 ORTHO05D008355 2.0e-58 229.9 243 51.4
Cpa.g.sc659.1 Carica papaya HOM05D001216 ORTHO05D008355 4.6e-58 228.8 159 73.6
PSO675G9306 Papaver somniferum HOM05D001216 ORTHO05D008355 2.3e-57 226.5 245 52.2
CDE02G2862 Ceratophyllum demersum HOM05D001216 ORTHO05D008355 3.9e-57 225.7 239 51.0
Hund21094 Selenicereus undatus HOM05D001216 ORTHO05D008355 1.5e-56 223.8 242 50.8
CDE11G0509 Ceratophyllum demersum HOM05D001216 ORTHO05D008355 1.2e-55 220.7 239 49.8
FAN17G2009 Fragaria x ananassa HOM05D001216 ORTHO05D008355 1.8e-54 216.9 236 52.1
Ah.13g072640 Amaranthus hybridus HOM05D001216 ORTHO05D008355 2.3e-54 216.5 241 50.2
SEGI_10998 Sequoiadendron giganteum HOM05D001216 ORTHO05D008355 7.0e-51 204.9 243 49.0
AUR62028158 Chenopodium quinoa HOM05D001216 ORTHO05D008355 6.2e-47 191.8 168 59.5
AUR62005907 Chenopodium quinoa HOM05D001216 ORTHO05D008355 8.1e-47 191.4 166 60.2
Pp3c16_11940 Physcomitrium patens HOM05D001216 ORTHO05D008355 7.5e-45 184.9 242 40.5
TWI34G0259 Tripterygium wilfordii HOM05D001216 ORTHO05D008355 8.3e-44 181.4 237 44.3
Mapoly0035s0150 Marchantia polymorpha HOM05D001216 ORTHO05D008355 1.9e-43 180.3 244 41.8
FvH4_3g43851 Fragaria vesca HOM05D001216 ORTHO05D008355 2.0e-37 160.2 111 71.2
CiPaw.05G238500 Carya illinoinensis HOM05D001216 ORTHO05D008355 1.1e-35 154.5 140 57.1
TAR374G0425 Trochodendron aralioides HOM05D001216 ORTHO05D008355 3.2e-35 152.9 164 50.0
CBR_g26129 Chara braunii HOM05D000019 ORTHO05D000002 4.1e-35 152.5 248 35.9
Actinidia04569 Actinidia chinensis HOM05D001216 ORTHO05D008355 2.3e-33 146.7 237 40.1
CANSAT21G0533 Cannabis sativa HOM05D001216 ORTHO05D008355 3.3e-32 142.9 148 49.3
Cpa.g.sc659.3 Carica papaya HOM05D001216 ORTHO05D008355 3.1e-14 83.2 33 90.9
PGSC0003DMG400000537 Solanum tuberosum HOM05D001216 ORTHO05D008355 5.3e-14 82.4 33 90.9
Haze_00609 Corylus avellana HOM05D001216 ORTHO05D008355 6.9e-14 82.0 31 96.8
Sabra13G0069500 Salix brachista HOM05D001216 ORTHO05D008355 9.0e-14 81.6 31 96.8
Zm00001eb188060 Zea mays HOM05D001216 ORTHO05D008355 6.7e-09 65.5 32 71.9


User provided reference genes

Program Settings