Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p024508 Quercus lobata HOM05D006359 ORTHO05D007871 1.3e-90 336.3 157 100.0
TWI74G0194 Tripterygium wilfordii HOM05D006359 ORTHO05D007871 4.2e-73 278.1 156 80.1
Cfa015873 Carpinus fangiana HOM05D006359 ORTHO05D007871 3.5e-72 275.0 156 79.5
CiPaw.06G019000 Carya illinoinensis HOM05D006359 ORTHO05D007871 8.7e-71 270.4 156 77.6
FvH4_7g33890 Fragaria vesca HOM05D006359 ORTHO05D007871 8.7e-71 270.4 153 78.4
RcHm_v2.0_Chr1g0384091 Rosa chinensis HOM05D006359 ORTHO05D007871 4.3e-70 268.1 153 78.4
Atru.chr12.1978 Acer truncatum HOM05D006359 ORTHO05D007871 1.6e-69 266.2 157 77.7
Medtr8g009960 Medicago truncatula HOM05D006359 ORTHO05D007871 1.6e-69 266.2 156 77.6
COL.COLO4_25307 Corchorus olitorius HOM05D006359 ORTHO05D007871 2.8e-69 265.4 158 76.6
Prupe.2G325400 Prunus persica HOM05D006359 ORTHO05D007871 2.8e-69 265.4 153 75.8
Cpa.g.sc39.69 Carica papaya HOM05D006359 ORTHO05D007871 4.8e-69 264.6 157 77.1
arahy.Tifrunner.gnm1.ann1.N39QDT Arachis hypogaea HOM05D006359 ORTHO05D007871 8.2e-69 263.8 154 77.3
PGR042G0220 Punica granatum HOM05D006359 ORTHO05D007871 8.2e-69 263.8 154 76.0
Thecc.09G264700 Theobroma cacao HOM05D006359 ORTHO05D007871 8.2e-69 263.8 157 77.1
GSVIVG01024414001 Vitis vinifera HOM05D006359 ORTHO05D007871 8.2e-69 263.8 154 76.6
CsaV3_5G005640 Cucumis sativus L. HOM05D006359 ORTHO05D007871 1.1e-68 263.5 156 76.9
Sabra19G0057200 Salix brachista HOM05D006359 ORTHO05D007871 1.1e-68 263.5 156 76.3
MELO3C005389.2 Cucumis melo HOM05D006359 ORTHO05D007871 1.8e-68 262.7 156 76.3
Ca_23151_v3 Cicer arietinum L. HOM05D006359 ORTHO05D007871 3.1e-68 261.9 157 77.7
Manes.08G162700 Manihot esculenta HOM05D006359 ORTHO05D007871 4.0e-68 261.5 157 76.4
Sed0025211 Sechium edule HOM05D006359 ORTHO05D007871 4.0e-68 261.5 156 76.3
THA.LOC104820881 Tarenaya hassleriana HOM05D006359 ORTHO05D007871 5.3e-68 261.2 157 76.4
TPR.G17376 Trifolium pratense HOM05D006359 ORTHO05D007871 5.3e-68 261.2 154 76.0
TPR.G779 Trifolium pratense HOM05D006359 ORTHO05D007871 5.3e-68 261.2 154 76.0
arahy.Tifrunner.gnm1.ann1.K5IGPH Arachis hypogaea HOM05D006359 ORTHO05D007871 6.9e-68 260.8 158 76.6
Sed0002409 Sechium edule HOM05D006359 ORTHO05D007871 6.9e-68 260.8 154 76.6
Phvul.002G039500 Phaseolus vulgaris HOM05D006359 ORTHO05D007871 9.0e-68 260.4 156 78.2
ATR0829G118 Amborella trichopoda HOM05D006359 ORTHO05D007871 1.2e-67 260.0 155 74.2
CANSAT56G0993 Cannabis sativa HOM05D006359 ORTHO05D007871 1.5e-67 259.6 154 75.3
Glyma.11G011200 Glycine max HOM05D006359 ORTHO05D007871 1.5e-67 259.6 156 76.9
Lalb_Chr05g0211271 Lupinus albus HOM05D006359 ORTHO05D007871 1.5e-67 259.6 150 79.3
PGSC0003DMG402000567 Solanum tuberosum HOM05D006359 ORTHO05D007871 1.5e-67 259.6 155 75.5
Aqoxy3G02089 Aquilegia oxysepala HOM05D006359 ORTHO05D007871 2.6e-67 258.8 156 73.1
Duzib168G1989 Durio zibethinus HOM05D006359 ORTHO05D007871 3.4e-67 258.5 157 75.2
FAN03G1870 Fragaria x ananassa HOM05D006359 ORTHO05D007871 3.4e-67 258.5 153 74.5
Glyma.01G228400 Glycine max HOM05D006359 ORTHO05D007871 3.4e-67 258.5 152 77.0
Gohir.D09G101400 Gossypium hirsutum HOM05D006359 ORTHO05D007871 4.5e-67 258.1 157 74.5
Gorai.006G118800 Gossypium raimondii HOM05D006359 ORTHO05D007871 4.5e-67 258.1 157 74.5
Potri.019G051400 Populus trichocarpa HOM05D006359 ORTHO05D007871 4.5e-67 258.1 156 75.6
Gohir.A09G104700 Gossypium hirsutum HOM05D006359 ORTHO05D007871 7.6e-67 257.3 157 74.5
MD01G1235400 Malus domestica HOM05D006359 ORTHO05D007871 1.0e-66 256.9 151 74.2
Sopen03g027690 Solanum pennellii HOM05D006359 ORTHO05D007871 1.0e-66 256.9 155 74.2
CSS0011317 Camellia sinensis var. sinensis HOM05D006359 ORTHO05D007871 2.2e-66 255.8 156 74.4
Lsat_1_v5_gn_3_105561 Lactuca sativa HOM05D006359 ORTHO05D007871 2.9e-66 255.4 155 75.5
Lj3g0004693 Lotus japonicus HOM05D006359 ORTHO05D007871 2.9e-66 255.4 156 73.7
MD07G1308200 Malus domestica HOM05D006359 ORTHO05D007871 2.9e-66 255.4 152 73.0
CAN.G303.77 Capsicum annuum HOM05D006359 ORTHO05D007871 3.8e-66 255.0 155 74.2
THA.LOC104827217 Tarenaya hassleriana HOM05D006359 ORTHO05D007871 3.8e-66 255.0 157 74.5
Carub.0003s0225 Capsella rubella HOM05D006359 ORTHO05D007871 6.5e-66 254.2 157 75.2
Aa31LG5G13580 Aethionema arabicum HOM05D006359 ORTHO05D007871 8.4e-66 253.8 157 73.2
TAR375G0743 Trochodendron aralioides HOM05D006359 ORTHO05D007871 1.1e-65 253.4 155 72.3
AUR62028171 Chenopodium quinoa HOM05D006359 ORTHO05D007871 1.4e-65 253.1 154 70.8
ECA246G3947 Erigeron canadensis HOM05D006359 ORTHO05D007871 1.4e-65 253.1 157 73.2
EL10Ac3g05084 Beta vulgaris HOM05D006359 ORTHO05D007871 2.5e-65 252.3 154 72.1
unitig_0.g2431 Utricularia gibba HOM05D001194 ORTHO05D007871 2.5e-65 252.3 155 72.9
Eucgr.K00090 Eucalyptus grandis HOM05D006359 ORTHO05D007871 5.5e-65 251.1 153 74.5
HanXRQChr12g0381881 Helianthus annuus HOM05D006359 ORTHO05D007871 1.2e-64 250.0 153 73.9
Zm00001eb025210 Zea mays HOM05D006359 ORTHO05D007871 2.1e-64 249.2 153 75.8
Ciclev10022653m.g Citrus clementina HOM05D006359 ORTHO05D007871 3.5e-64 248.4 151 73.5
AT3G03100 Arabidopsis thaliana HOM05D006359 ORTHO05D007871 4.6e-64 248.1 157 72.0
Migut.F00100 Erythranthe guttata HOM05D006359 ORTHO05D007871 4.6e-64 248.1 153 72.5
Thhalv10021682m.g Eutrema salsugineum HOM05D006359 ORTHO05D007871 4.6e-64 248.1 157 71.3
PSO063G2711 Papaver somniferum HOM05D006359 ORTHO05D007871 6.0e-64 247.7 154 68.8
SGA_v2.0_scaffold18G08507 Striga asiatica HOM05D006359 ORTHO05D007871 6.0e-64 247.7 153 72.5
Cc02_g00330 Coffea canephora HOM05D006359 ORTHO05D007871 7.9e-64 247.3 153 73.2
BolC1t05848H Brassica oleracea HOM05D006359 ORTHO05D007871 1.0e-63 246.9 157 70.7
BraA01t04593Z Brassica rapa HOM05D006359 ORTHO05D007871 1.0e-63 246.9 157 70.7
SalBow4G0660 Salvia bowleyana HOM05D006359 ORTHO05D007871 1.0e-63 246.9 154 71.4
SalBow4G2166 Salvia bowleyana HOM05D006359 ORTHO05D007871 1.0e-63 246.9 154 71.4
A05p44080 Brassica napus HOM05D006359 ORTHO05D007871 1.8e-63 246.1 157 70.1
PSO782G4768 Papaver somniferum HOM05D006359 ORTHO05D007871 1.8e-63 246.1 154 68.8
AL3G12700 Arabidopsis lyrata HOM05D006359 ORTHO05D007871 2.3e-63 245.7 157 71.3
Actinidia18703 Actinidia chinensis HOM05D006359 ORTHO05D007871 3.0e-63 245.4 153 72.5
arahy.Tifrunner.gnm1.ann1.0WZ6H1 Arachis hypogaea HOM05D006359 ORTHO05D007871 3.0e-63 245.4 166 69.3
C05p63700 Brassica napus HOM05D006359 ORTHO05D007871 3.9e-63 245.0 157 69.4
BolC5t35039H Brassica oleracea HOM05D006359 ORTHO05D007871 3.9e-63 245.0 157 69.4
BraSC90t46703Z Brassica rapa HOM05D006359 ORTHO05D007871 3.9e-63 245.0 157 69.4
Os10g0579300 Oryza sativa ssp. japonica HOM05D006359 ORTHO05D007871 3.9e-63 245.0 153 75.2
CARHR077120 Cardamine hirsuta HOM05D006359 ORTHO05D007871 8.7e-63 243.8 157 70.1
Sp3g02140 Schrenkiella parvula HOM05D006359 ORTHO05D007871 1.1e-62 243.4 157 69.4
Duzib150G0394 Durio zibethinus HOM05D006359 ORTHO05D007871 1.9e-62 242.7 157 70.1
SGA_v2.0_scaffold44G16885 Striga asiatica HOM05D006359 ORTHO05D007871 4.3e-62 241.5 155 70.3
FAN01G1102 Fragaria x ananassa HOM05D006359 ORTHO05D007871 1.3e-61 240.0 160 70.6
Hund09785 Selenicereus undatus HOM05D006359 ORTHO05D007871 1.3e-61 240.0 152 71.7
CDE02G3318 Ceratophyllum demersum HOM05D005498 ORTHO05D006719 1.1e-60 236.9 145 72.4
TPR.G4015 Trifolium pratense HOM05D006359 ORTHO05D007871 1.1e-60 236.9 154 71.4
Peaxi162Scf00745g00854 Petunia axillaris HOM05D006359 ORTHO05D007871 3.1e-60 235.3 156 71.2
Dinv29162 Davidia involucrata HOM05D006359 ORTHO05D007871 4.1e-60 235.0 147 72.8
FAN03G2552 Fragaria x ananassa HOM05D006359 ORTHO05D007871 6.9e-60 234.2 160 69.4
Zm00001eb224990 Zea mays HOM05D006359 ORTHO05D007871 1.0e-58 230.3 151 72.2
Nitab4.5_0011930g0020 Nicotiana tabacum HOM05D006359 ORTHO05D007871 2.2e-58 229.2 155 69.0
AUR62002057 Chenopodium quinoa HOM05D006359 ORTHO05D007871 2.9e-58 228.8 154 66.2
Nitab4.5_0000021g0410 Nicotiana tabacum HOM05D006359 ORTHO05D007871 3.8e-58 228.4 125 82.4
Rhsim09G0212500 Rhododendron simsii HOM05D006359 ORTHO05D007871 5.0e-58 228.0 153 69.3
VMungo1215G3178 Vigna mungo HOM05D006359 ORTHO05D007871 1.1e-57 226.9 127 80.3
Haze_00616 Corylus avellana HOM05D006359 ORTHO05D007871 1.9e-57 226.1 156 69.9
Sc13g0010840 Simmondsia chinensis HOM05D006359 ORTHO05D007871 5.5e-57 224.6 125 80.8
vmacro10188 Vaccinium macrocarpon HOM05D006359 ORTHO05D007871 2.7e-56 222.2 126 79.4
Lj3A888T26 Lonicera japonica HOM05D006359 ORTHO05D007871 2.8e-53 212.2 119 79.8
arahy.Tifrunner.gnm1.ann1.PN0BWC Arachis hypogaea HOM05D006359 ORTHO05D007871 4.5e-51 204.9 124 76.6
CDE11G0363 Ceratophyllum demersum HOM05D006359 ORTHO05D007871 1.0e-50 203.8 118 76.3
FAN02G0767 Fragaria x ananassa HOM05D006359 ORTHO05D007871 1.8e-47 193.0 128 69.5
HPP92_002578 Vanilla planifolia HOM05D006076 ORTHO05D007871 1.8e-47 193.0 123 69.9
Gorai.009G080000 Gossypium raimondii HOM05D006359 ORTHO05D007871 5.1e-47 191.4 158 58.9
ClCG01G005390 Citrullus lanatus HOM05D006359 ORTHO05D007871 3.7e-45 185.3 116 74.1
BNapus_Darmor_BZH_scaffold_129p00020 Brassica napus HOM05D006359 ORTHO05D007871 6.3e-45 184.5 135 63.7
Mapoly0001s0046 Marchantia polymorpha HOM05D006359 ORTHO05D007871 1.1e-44 183.7 157 55.4
AagrBONN_evm.TU.Sc2ySwM_344.5152 Anthoceros agrestis HOM05D006359 ORTHO05D007871 5.3e-44 181.4 149 55.7
FAN05G5659 Fragaria x ananassa HOM05D006359 ORTHO05D007871 5.9e-43 177.9 108 74.1
Pp3c16_5910 Physcomitrium patens HOM05D006359 ORTHO05D007871 1.1e-41 173.7 159 52.2
BcaB04g21383 Brassica carinata HOM05D006359 ORTHO05D007871 1.2e-40 170.2 117 67.5
Psat4g215600 Pisum sativum HOM05D006359 ORTHO05D007871 7.9e-40 167.5 105 71.4
HPP92_002576 Vanilla planifolia HOM05D004915 ORTHO05D006048 1.8e-39 166.4 99 75.8
Nn1g01943 Nelumbo nucifera HOM05D006359 ORTHO05D007871 2.2e-37 159.5 103 68.9
Gohir.A05G075800 Gossypium hirsutum HOM05D006359 ORTHO05D007871 6.3e-37 157.9 157 51.6
SMO331G0004 Selaginella moellendorffii HOM05D006359 ORTHO05D007871 4.1e-36 155.2 104 65.4
CBR_g23185 Chara braunii HOM05D000019 ORTHO05D000002 5.3e-36 154.8 154 48.1
HPP92_002574 Vanilla planifolia HOM05D004915 ORTHO05D006048 1.6e-35 153.3 91 75.8
Hma1.2p1_0758F.1_g213680 Hydrangea macrophylla HOM05D006359 ORTHO05D007871 3.2e-33 145.6 93 74.2
FAN10G1928 Fragaria x ananassa HOM05D006359 ORTHO05D007871 1.3e-29 133.7 79 74.7
Hma1.2p1_0758F.1_g213690 Hydrangea macrophylla HOM05D006359 ORTHO05D007871 1.6e-27 126.7 82 73.2
MCO08G302 Micromonas commoda HOM05D006359 ORTHO05D007871 1.8e-20 103.2 112 47.3
Gohir.D05G078700 Gossypium hirsutum HOM05D001598 ORTHO05D007192 4.5e-19 98.6 61 70.5
vmacro23522 Vaccinium macrocarpon HOM05D006359 ORTHO05D007871 1.5e-17 93.6 46 84.8
Actinidia33791 Actinidia chinensis HOM05D006359 ORTHO05D007871 1.6e-16 90.1 61 63.9
Cre11.g467767 Chlamydomonas reinhardtii HOM05D006359 ORTHO05D007871 2.8e-16 89.4 148 33.1
Haze_26508 Corylus avellana HOM05D006359 ORTHO05D007871 7.0e-12 74.7 113 41.6


User provided reference genes

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