Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p024031 Quercus lobata HOM05D006678 ORTHO05D008388 6.9e-53 210.3 102 100.0
CiPaw.06G032600 Carya illinoinensis HOM05D006678 ORTHO05D008388 6.3e-46 187.2 102 85.3
Ciclev10023015m.g Citrus clementina HOM05D006678 ORTHO05D008388 1.6e-44 182.6 102 84.3
Thecc.05G213400 Theobroma cacao HOM05D006678 ORTHO05D008388 2.0e-44 182.2 100 87.0
COL.COLO4_11805 Corchorus olitorius HOM05D006678 ORTHO05D008388 7.7e-44 180.3 100 84.0
MD01G1236000 Malus domestica HOM05D006678 ORTHO05D008388 7.7e-44 180.3 103 85.4
Manes.09G127100 Manihot esculenta HOM05D006678 ORTHO05D008388 2.2e-43 178.7 102 81.4
Duzib177G0619 Durio zibethinus HOM05D006678 ORTHO05D008388 2.9e-43 178.3 100 84.0
Gohir.D13G161000 Gossypium hirsutum HOM05D006678 ORTHO05D008388 8.5e-43 176.8 100 84.0
Gorai.013G181600 Gossypium raimondii HOM05D006678 ORTHO05D008388 8.5e-43 176.8 100 84.0
GSVIVG01024408001 Vitis vinifera HOM05D006678 ORTHO05D008388 8.5e-43 176.8 102 82.4
Prupe.2G326100 Prunus persica HOM05D006678 ORTHO05D008388 1.1e-42 176.4 103 84.5
Duzib106G0454 Durio zibethinus HOM05D006678 ORTHO05D008388 1.5e-42 176.0 100 83.0
ClCG02G007680 Citrullus lanatus HOM05D006678 ORTHO05D008388 2.5e-42 175.3 103 80.6
Atru.chr12.1964 Acer truncatum HOM05D006678 ORTHO05D008388 4.2e-42 174.5 103 81.6
MELO3C024729.2 Cucumis melo HOM05D006678 ORTHO05D008388 4.2e-42 174.5 103 80.6
Gohir.A13G156100 Gossypium hirsutum HOM05D006678 ORTHO05D008388 7.2e-42 173.7 100 82.0
VMungo1127G1968 Vigna mungo HOM05D006678 ORTHO05D008388 1.2e-41 172.9 103 80.6
Phvul.011G020300 Phaseolus vulgaris HOM05D006678 ORTHO05D008388 3.6e-41 171.4 103 78.6
CsaV3_2G036030 Cucumis sativus L. HOM05D006678 ORTHO05D008388 4.7e-41 171.0 103 79.6
THA.LOC104802920 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 4.7e-41 171.0 102 79.4
THA.LOC104827215 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 8.0e-41 170.2 102 80.4
arahy.Tifrunner.gnm1.ann1.Z69A25 Arachis hypogaea HOM05D006678 ORTHO05D008388 1.0e-40 169.9 105 78.1
Glyma.12G017800 Glycine max HOM05D006678 ORTHO05D008388 1.0e-40 169.9 103 79.6
Ca_04918_v3 Cicer arietinum L. HOM05D006678 ORTHO05D008388 1.8e-40 169.1 105 76.2
Glyma.11G091800 Glycine max HOM05D006678 ORTHO05D008388 1.8e-40 169.1 105 77.1
PGR042G1336 Punica granatum HOM05D006678 ORTHO05D008388 1.8e-40 169.1 111 78.4
Medtr4g077807 Medicago truncatula HOM05D006678 ORTHO05D008388 3.0e-40 168.3 105 77.1
RcHm_v2.0_Chr1g0384211 Rosa chinensis HOM05D006678 ORTHO05D008388 4.0e-40 167.9 104 78.8
Sed0006085 Sechium edule HOM05D006678 ORTHO05D008388 4.0e-40 167.9 104 80.8
Psat7g171800 Pisum sativum HOM05D006678 ORTHO05D008388 5.2e-40 167.5 105 75.2
TWI38G1314 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 8.8e-40 166.8 103 80.6
Nn1g01909 Nelumbo nucifera HOM05D006678 ORTHO05D008388 2.0e-39 165.6 104 77.9
CARHR077080 Cardamine hirsuta HOM05D006678 ORTHO05D008388 2.6e-39 165.2 110 73.6
FAN03G1679 Fragaria x ananassa HOM05D006678 ORTHO05D008388 2.6e-39 165.2 103 77.7
Potri.013G082100 Populus trichocarpa HOM05D006678 ORTHO05D008388 2.6e-39 165.2 109 72.5
TPR.G27187 Trifolium pratense HOM05D006678 ORTHO05D008388 2.6e-39 165.2 105 74.3
Lj3g0002487 Lotus japonicus HOM05D006678 ORTHO05D008388 3.3e-39 164.9 111 73.0
TAR629G1392 Trochodendron aralioides HOM05D006678 ORTHO05D008388 3.3e-39 164.9 102 78.4
FAN10G1380 Fragaria x ananassa HOM05D006678 ORTHO05D008388 4.4e-39 164.5 103 76.7
FvH4_7g33980 Fragaria vesca HOM05D006678 ORTHO05D008388 5.7e-39 164.1 103 77.7
AT3G03070 Arabidopsis thaliana HOM05D006678 ORTHO05D008388 7.5e-39 163.7 110 72.7
CANSAT21G1467 Cannabis sativa HOM05D006678 ORTHO05D008388 7.5e-39 163.7 102 76.5
PSO063G3868 Papaver somniferum HOM05D006678 ORTHO05D008388 7.5e-39 163.7 104 76.0
TWI39G0757 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 9.7e-39 163.3 103 78.6
Aa31LG5G13550 Aethionema arabicum HOM05D006678 ORTHO05D008388 2.2e-38 162.2 110 71.8
Thhalv10021803m.g Eutrema salsugineum HOM05D006678 ORTHO05D008388 2.2e-38 162.2 110 71.8
PSO782G5154 Papaver somniferum HOM05D006678 ORTHO05D008388 2.2e-38 162.2 104 75.0
Lalb_Chr01g0000921 Lupinus albus HOM05D006678 ORTHO05D008388 2.8e-38 161.8 102 76.5
Actinidia18705 Actinidia chinensis HOM05D006678 ORTHO05D008388 4.8e-38 161.0 104 77.9
Lalb_Chr03g0024411 Lupinus albus HOM05D006678 ORTHO05D008388 4.8e-38 161.0 106 73.6
AL3G12580 Arabidopsis lyrata HOM05D006678 ORTHO05D008388 8.2e-38 160.2 110 70.9
FAN01G1466 Fragaria x ananassa HOM05D006678 ORTHO05D008388 8.2e-38 160.2 103 75.7
Sp3g02110 Schrenkiella parvula HOM05D006678 ORTHO05D008388 1.4e-37 159.5 111 70.3
C05p63740 Brassica napus HOM05D006678 ORTHO05D008388 1.8e-37 159.1 112 69.6
Carub.0003s0222 Capsella rubella HOM05D006678 ORTHO05D008388 2.4e-37 158.7 110 70.0
Nitab4.5_0000021g0500 Nicotiana tabacum HOM05D006678 ORTHO05D008388 2.4e-37 158.7 105 74.3
Dinv17257 Davidia involucrata HOM05D006678 ORTHO05D008388 4.1e-37 157.9 106 76.4
Sabra13G0070800 Salix brachista HOM05D006678 ORTHO05D008388 4.1e-37 157.9 112 68.8
Aqoxy3G02158 Aquilegia oxysepala HOM05D006678 ORTHO05D008388 9.1e-37 156.8 89 83.1
BcaB04g21385 Brassica carinata HOM05D006678 ORTHO05D008388 1.2e-36 156.4 111 70.3
Peaxi162Scf00133g00723 Petunia axillaris HOM05D006678 ORTHO05D008388 1.2e-36 156.4 102 74.5
Hund09791 Selenicereus undatus HOM05D006678 ORTHO05D008388 1.2e-36 156.4 103 72.8
SGA_v2.0_scaffold50G18440 Striga asiatica HOM05D006678 ORTHO05D008388 1.6e-36 156.0 104 75.0
MSTRG.26930 Avicennia marina HOM05D006678 ORTHO05D008388 2.0e-36 155.6 104 75.0
BolC5t35043H Brassica oleracea HOM05D006678 ORTHO05D008388 2.0e-36 155.6 112 67.9
Nitab4.5_0011186g0030 Nicotiana tabacum HOM05D006678 ORTHO05D008388 2.0e-36 155.6 105 73.3
Actinidia34306 Actinidia chinensis HOM05D006678 ORTHO05D008388 2.7e-36 155.2 106 74.5
Lsat_1_v5_gn_9_47480 Lactuca sativa HOM05D006678 ORTHO05D008388 3.5e-36 154.8 104 73.1
DCAR_009010 Daucus carota HOM05D006678 ORTHO05D008388 4.5e-36 154.5 112 68.8
Oeu031704.1 Olea europaea HOM05D006678 ORTHO05D008388 4.5e-36 154.5 106 74.5
Dinv29159 Davidia involucrata HOM05D006678 ORTHO05D008388 5.9e-36 154.1 106 76.4
Rhsim03G0221400 Rhododendron simsii HOM05D006678 ORTHO05D008388 5.9e-36 154.1 107 73.8
A05p44110 Brassica napus HOM05D006678 ORTHO05D008388 7.7e-36 153.7 112 67.0
BNapus_Darmor_BZH_scaffold_129p00040 Brassica napus HOM05D006678 ORTHO05D008388 7.7e-36 153.7 111 69.4
BraSC90t46700Z Brassica rapa HOM05D006678 ORTHO05D008388 7.7e-36 153.7 112 67.0
BolC1t05850H Brassica oleracea HOM05D006678 ORTHO05D008388 2.2e-35 152.1 111 69.4
Migut.F00948 Erythranthe guttata HOM05D006678 ORTHO05D008388 2.9e-35 151.8 104 73.1
Gorai.013G182200 Gossypium raimondii HOM05D006678 ORTHO05D008388 3.8e-35 151.4 100 74.0
HanXRQChr03g0088421 Helianthus annuus HOM05D006678 ORTHO05D008388 5.0e-35 151.0 105 73.3
CSS0031072 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 6.5e-35 150.6 115 67.8
CDE06G2089 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 6.5e-35 150.6 94 73.4
ATR0829G044 Amborella trichopoda HOM05D006678 ORTHO05D008388 1.1e-34 149.8 93 75.3
BraA01t04595Z Brassica rapa HOM05D006678 ORTHO05D008388 1.1e-34 149.8 111 68.5
CSS0016806 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 3.2e-34 148.3 121 65.3
CDE03G0140 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 5.5e-34 147.5 98 75.5
vmacro06510 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 5.5e-34 147.5 114 67.5
unitig_90.g27534 Utricularia gibba HOM05D006678 ORTHO05D008388 7.2e-34 147.1 104 72.1
SalBow2G2234 Salvia bowleyana HOM05D006678 ORTHO05D008388 2.1e-33 145.6 103 68.0
Hma1.2p1_1680F.1_g297200 Hydrangea macrophylla HOM05D006678 ORTHO05D008388 2.7e-33 145.2 107 72.0
AUR62028176 Chenopodium quinoa HOM05D006678 ORTHO05D008388 6.1e-33 144.1 103 68.0
EL10Ac3g05077 Beta vulgaris HOM05D006678 ORTHO05D008388 1.0e-32 143.3 103 68.9
AUR62002062 Chenopodium quinoa HOM05D006678 ORTHO05D008388 1.0e-32 143.3 103 68.0
Solyc03g097010.3 Solanum lycopersicum HOM05D006678 ORTHO05D008388 1.0e-32 143.3 105 72.4
Sopen03g027760 Solanum pennellii HOM05D006678 ORTHO05D008388 1.0e-32 143.3 105 72.4
Cc02_g00280 Coffea canephora HOM05D006678 ORTHO05D008388 1.5e-31 139.4 114 65.8
Haze_00425 Corylus avellana HOM05D006877 ORTHO05D008735 4.4e-31 137.9 65 95.4
ECA232G0519 Erigeron canadensis HOM05D006678 ORTHO05D008388 9.1e-29 130.2 94 70.2
CAN.G1131.11 Capsicum annuum HOM05D006678 ORTHO05D008388 1.2e-28 129.8 65 87.7
vmacro22173 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 2.0e-28 129.0 95 67.4
Oeu063732.2 Olea europaea HOM05D006678 ORTHO05D008388 3.5e-28 128.3 159 49.7
Os08g0161700 Oryza sativa ssp. japonica HOM05D006678 ORTHO05D008388 7.7e-28 127.1 79 70.9
Zm00001eb172200 Zea mays HOM05D006678 ORTHO05D008388 1.7e-27 125.9 75 76.0
Nitab4.5_0000011g0100 Nicotiana tabacum HOM05D006678 ORTHO05D008388 2.9e-27 125.2 64 87.5
Duzib128G0155 Durio zibethinus HOM05D006678 ORTHO05D008388 1.5e-26 122.9 75 76.0
SMO239G0055 Selaginella moellendorffii HOM05D006678 ORTHO05D008388 1.5e-26 122.9 72 72.2
AagrBONN_evm.TU.Sc2ySwM_368.1248 Anthoceros agrestis HOM05D006678 ORTHO05D008388 1.9e-26 122.5 76 68.4
Mapoly0006s0269 Marchantia polymorpha HOM05D006678 ORTHO05D008388 1.2e-25 119.8 73 72.6
SEGI_28569 Sequoiadendron giganteum HOM05D006678 ORTHO05D008388 2.8e-25 118.6 61 86.9
Pp3c24_2620 Physcomitrium patens HOM05D006678 ORTHO05D008388 6.1e-25 117.5 84 65.5
Ah.13g072760 Amaranthus hybridus HOM05D006678 ORTHO05D008388 5.7e-23 110.9 64 82.8
Pp3c23_13320 Physcomitrium patens HOM05D006678 ORTHO05D008388 1.1e-21 106.7 83 63.9
Gohir.D13G160300 Gossypium hirsutum HOM05D006678 ORTHO05D008388 1.0e-19 100.1 66 78.8
arahy.Tifrunner.gnm1.ann1.GV73NI Arachis hypogaea HOM05D006678 ORTHO05D008388 8.6e-19 97.1 69 75.4
PRCOL_00006130 Prasinoderma coloniale HOM05D006678 ORTHO05D008388 2.1e-17 92.4 96 52.1
Sc06g0002530 Simmondsia chinensis HOM05D002239 ORTHO05D002408 4.4e-15 84.7 68 64.7
Cre03.g178250 Chlamydomonas reinhardtii HOM05D006678 ORTHO05D008388 4.1e-13 78.2 74 54.1
Zm00001eb415610 Zea mays HOM05D006678 ORTHO05D008388 8.6e-11 70.5 38 81.6
CBR_g6679 Chara braunii HOM05D006678 ORTHO05D008388 8.0e-09 63.9 34 73.5


User provided reference genes

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