Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p024027 Quercus lobata HOM05D009378 ORTHO05D010101 4.7e-146 521.2 262 100.0
QL05p062837 Quercus lobata HOM05D009378 ORTHO05D010101 1.5e-67 260.4 273 55.3
QL09p024013 Quercus lobata HOM05D008014 ORTHO05D010101 4.8e-66 255.4 262 53.8
QL93p0209_0016 Quercus lobata HOM05D009378 ORTHO05D010101 2.6e-51 206.5 265 47.2
QL09p024175 Quercus lobata HOM05D009378 ORTHO05D010101 1.3e-50 204.1 268 46.3
QL09p024149 Quercus lobata HOM05D009378 ORTHO05D010101 1.2e-48 197.6 265 46.8
QL93p0209_0042 Quercus lobata HOM05D009378 ORTHO05D010101 1.2e-48 197.6 265 46.8
QL09p024439 Quercus lobata HOM05D009378 ORTHO05D010101 5.6e-46 188.7 262 46.2
QL09p024465 Quercus lobata HOM05D000125 ORTHO05D010101 2.1e-45 186.8 261 46.0
Haze_13413 Corylus avellana HOM05D000125 ORTHO05D010101 5.8e-43 178.7 264 44.3
Cfa016027 Carpinus fangiana HOM05D009378 ORTHO05D010101 1.4e-41 174.1 258 41.1
QL02p073603 Quercus lobata HOM05D000125 ORTHO05D010101 2.7e-40 169.9 216 48.1
Haze_00404 Corylus avellana HOM05D000125 ORTHO05D010101 3.5e-40 169.5 235 43.0
CiPaw.06G031800 Carya illinoinensis HOM05D000125 ORTHO05D010101 1.3e-39 167.5 210 47.1
Haze_14777 Corylus avellana HOM05D000125 ORTHO05D010101 6.6e-39 165.2 265 41.5
Haze_00406 Corylus avellana HOM05D000125 ORTHO05D010101 4.7e-37 159.1 210 43.3
Cfa007320 Carpinus fangiana HOM05D000125 ORTHO05D010101 6.2e-37 158.7 252 42.9
Cfa016029 Carpinus fangiana HOM05D009378 ORTHO05D010101 1.4e-36 157.5 251 40.2
Cfa016030 Carpinus fangiana HOM05D000125 ORTHO05D010101 1.5e-35 154.1 261 39.5
Cfa013571 Carpinus fangiana HOM05D000125 ORTHO05D010101 7.1e-33 145.2 242 37.2
Cfa016031 Carpinus fangiana HOM05D000125 ORTHO05D010101 1.2e-32 144.4 220 41.8
Haze_19953 Corylus avellana HOM05D009378 ORTHO05D010101 1.7e-31 140.6 252 34.9
Haze_00427 Corylus avellana HOM05D000125 ORTHO05D010101 3.0e-31 139.8 199 43.2
QL09p028133 Quercus lobata HOM05D009378 ORTHO05D010101 9.5e-30 134.8 246 38.2
Haze_00511 Corylus avellana HOM05D009378 ORTHO05D010101 2.1e-29 133.7 162 50.0
Cfa016894 Carpinus fangiana HOM05D000125 ORTHO05D010101 2.8e-29 133.3 245 33.9
TWI81G0642 Tripterygium wilfordii HOM05D000125 ORTHO05D010101 2.3e-23 113.6 232 33.6
PGR044G2047 Punica granatum HOM05D009378 ORTHO05D010101 4.7e-21 105.9 200 34.5
CSS0030731 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.8e-20 104.0 247 32.8
PGR031G1223 Punica granatum HOM05D009378 ORTHO05D010101 6.8e-20 102.1 195 35.4
Haze_00401 Corylus avellana HOM05D009378 ORTHO05D010101 5.8e-19 99.0 120 51.7
PGR031G1316 Punica granatum HOM05D000125 ORTHO05D010101 4.9e-18 95.9 237 27.4
QL04p029513 Quercus lobata HOM05D000125 ORTHO05D000120 2.4e-17 93.6 209 30.6
Cpa.g.sc623.3 Carica papaya HOM05D009378 ORTHO05D010101 9.3e-17 91.7 249 28.1
CSS0022186 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 3.5e-16 89.7 135 39.3
CSS0003791 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 6.0e-16 89.0 100 45.0
CSS0032415 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 6.0e-16 89.0 135 39.3
PGR102G3309 Punica granatum HOM05D000125 ORTHO05D010101 6.0e-16 89.0 165 34.5
QL04p029700 Quercus lobata HOM05D020596 ORTHO05D010101 6.0e-16 89.0 148 36.5
QL04p029580 Quercus lobata HOM05D000125 ORTHO05D000120 7.8e-16 88.6 174 33.3
QL04p029877 Quercus lobata HOM05D020596 ORTHO05D010101 7.8e-16 88.6 174 33.3
QL04p029779 Quercus lobata HOM05D020596 ORTHO05D010101 1.0e-15 88.2 158 33.5
CANSAT21G1400 Cannabis sativa HOM05D000125 ORTHO05D010101 3.0e-15 86.7 168 34.5
Eucgr.E00385 Eucalyptus grandis HOM05D000125 ORTHO05D010101 3.0e-15 86.7 237 29.1
CSS0010878 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 5.1e-15 85.9 130 38.5
PGR042G0442 Punica granatum HOM05D000125 ORTHO05D000807 6.6e-15 85.5 162 31.5
CSS0027146 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 8.7e-15 85.1 135 38.5
QL05p044270 Quercus lobata HOM05D000125 ORTHO05D007874 7.3e-14 82.0 157 34.4
Sed0024411 Sechium edule HOM05D024292 ORTHO05D010101 7.3e-14 82.0 218 25.2
QL04p029334 Quercus lobata HOM05D020596 ORTHO05D010101 9.6e-14 81.6 148 37.2
CSS0003795 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D010101 1.3e-13 81.3 165 32.7
CSS0034581 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.6e-13 80.9 143 37.8
Gohir.D05G343433 Gossypium hirsutum HOM05D008014 ORTHO05D009981 6.2e-13 79.0 183 27.9
Ciclev10027597m.g Citrus clementina HOM05D000125 ORTHO05D000120 1.1e-12 78.2 147 27.2
CSS0047661 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.4e-12 77.8 233 30.0
CSS0042755 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.8e-12 77.4 109 38.5
Gorai.009G369600 Gossypium raimondii HOM05D008014 ORTHO05D009981 1.8e-12 77.4 183 28.4
CSS0029307 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 2.4e-12 77.0 139 34.5
Actinidia13806 Actinidia chinensis HOM05D000125 ORTHO05D030879 2.0e-11 73.9 145 30.3
Thecc.03G303700 Theobroma cacao HOM05D008014 ORTHO05D009981 2.0e-11 73.9 204 27.0
Haze_00441 Corylus avellana HOM05D000125 ORTHO05D010101 2.6e-11 73.6 138 36.2
Eucgr.E00390 Eucalyptus grandis HOM05D009378 ORTHO05D010101 2.6e-11 73.6 210 31.0
Gohir.A04G040100 Gossypium hirsutum HOM05D008014 ORTHO05D009981 5.8e-11 72.4 183 26.2
Gohir.D05G342800 Gossypium hirsutum HOM05D008014 ORTHO05D009981 5.8e-11 72.4 107 33.6
Gorai.009G369400 Gossypium raimondii HOM05D008014 ORTHO05D009981 5.8e-11 72.4 107 33.6
Actinidia02169 Actinidia chinensis HOM05D000125 ORTHO05D030879 7.6e-11 72.0 185 30.3
Gohir.A04G040200 Gossypium hirsutum HOM05D008014 ORTHO05D009981 7.6e-11 72.0 102 33.3
Actinidia13804 Actinidia chinensis HOM05D000125 ORTHO05D030879 9.9e-11 71.6 96 36.5
Gohir.A01G057332 Gossypium hirsutum HOM05D008014 ORTHO05D009981 1.3e-10 71.2 105 31.4
Gohir.A04G040400 Gossypium hirsutum HOM05D008014 ORTHO05D009981 1.3e-10 71.2 107 33.6
Gorai.009G371800 Gossypium raimondii HOM05D008014 ORTHO05D009981 1.3e-10 71.2 104 32.7
PGR102G2634 Punica granatum HOM05D000125 ORTHO05D010101 1.7e-10 70.9 244 25.4
ClCG01G004320 Citrullus lanatus HOM05D024292 ORTHO05D010101 2.2e-10 70.5 115 30.4
Ciclev10027164m.g Citrus clementina HOM05D000125 ORTHO05D000120 2.2e-10 70.5 98 31.6
Thecc.03G304500 Theobroma cacao HOM05D008014 ORTHO05D009981 2.2e-10 70.5 202 28.2
Thecc.03G305000 Theobroma cacao HOM05D008014 ORTHO05D009981 2.2e-10 70.5 202 28.2
Cpa.g.sc623.1 Carica papaya HOM05D009378 ORTHO05D010101 3.8e-10 69.7 243 27.2
MELO3C005509.2 Cucumis melo HOM05D024292 ORTHO05D010101 4.9e-10 69.3 165 26.7
Gohir.D01G043732 Gossypium hirsutum HOM05D008014 ORTHO05D009981 6.4e-10 68.9 105 31.4
Gorai.002G062900 Gossypium raimondii HOM05D008014 ORTHO05D009981 6.4e-10 68.9 105 31.4
PGR042G3408 Punica granatum HOM05D000125 ORTHO05D000120 6.4e-10 68.9 109 34.9
Duzib213G1088 Durio zibethinus HOM05D008014 ORTHO05D009981 1.1e-09 68.2 164 28.0
Gorai.009G369100 Gossypium raimondii HOM05D008014 ORTHO05D009981 1.1e-09 68.2 107 31.8
Duzib213G0359 Durio zibethinus HOM05D008014 ORTHO05D009981 1.4e-09 67.8 146 31.5
Gohir.D05G342750 Gossypium hirsutum HOM05D008014 ORTHO05D009981 1.4e-09 67.8 107 31.8
CANSAT11G0715 Cannabis sativa HOM05D000125 ORTHO05D000120 1.9e-09 67.4 171 28.7
COL.COLO4_30081 Corchorus olitorius HOM05D008014 ORTHO05D009981 1.9e-09 67.4 164 26.8
Duzib187G1296 Durio zibethinus HOM05D008014 ORTHO05D009981 1.9e-09 67.4 195 25.1
Gohir.A01G057400 Gossypium hirsutum HOM05D008014 ORTHO05D009981 1.9e-09 67.4 134 30.6
Gohir.D01G044000 Gossypium hirsutum HOM05D008014 ORTHO05D009981 1.9e-09 67.4 151 29.1
Duzib205G1694 Durio zibethinus HOM05D008014 ORTHO05D009981 2.4e-09 67.0 163 28.8
CsaV3_5G004510 Cucumis sativus L. HOM05D024292 ORTHO05D010101 3.2e-09 66.6 165 26.1
Duzib170G0545 Durio zibethinus HOM05D008014 ORTHO05D009981 3.2e-09 66.6 147 26.5
Gorai.002G063200 Gossypium raimondii HOM05D008014 ORTHO05D009981 3.2e-09 66.6 151 28.5
Ciclev10014060m.g Citrus clementina HOM05D000125 ORTHO05D000120 4.2e-09 66.2 248 22.6
Gohir.D08G180600 Gossypium hirsutum HOM05D008014 ORTHO05D009981 4.2e-09 66.2 170 27.6
Gorai.004G189100 Gossypium raimondii HOM05D008014 ORTHO05D009981 4.2e-09 66.2 202 27.7
Duzib187G0568 Durio zibethinus HOM05D008014 ORTHO05D009981 5.4e-09 65.9 131 27.5
Gohir.A08G160100 Gossypium hirsutum HOM05D013541 ORTHO05D009981 9.3e-09 65.1 202 26.2
Gohir.A08G160200 Gossypium hirsutum HOM05D013541 ORTHO05D009981 9.3e-09 65.1 202 26.2
Gohir.D01G043800 Gossypium hirsutum HOM05D008014 ORTHO05D009981 9.3e-09 65.1 140 27.1
Gorai.002G063000 Gossypium raimondii HOM05D008014 ORTHO05D009981 9.3e-09 65.1 140 27.1
Dinv20791 Davidia involucrata HOM05D000699 ORTHO05D000519 1.2e-08 64.7 140 30.7
ClCG01G004310 Citrullus lanatus HOM05D024292 ORTHO05D010101 1.6e-08 64.3 161 26.1
Eucgr.E00393 Eucalyptus grandis HOM05D000125 ORTHO05D000120 1.6e-08 64.3 213 28.2
Thecc.09G297200 Theobroma cacao HOM05D008014 ORTHO05D009981 3.5e-08 63.2 183 24.0
CANSAT11G0593 Cannabis sativa HOM05D000125 ORTHO05D010101 4.6e-08 62.8 134 29.9
Gohir.A01G057600 Gossypium hirsutum HOM05D008014 ORTHO05D009981 4.6e-08 62.8 152 25.7
COL.COLO4_17130 Corchorus olitorius HOM05D008014 ORTHO05D009981 7.8e-08 62.0 206 24.3
Gohir.D08G180500 Gossypium hirsutum HOM05D013541 ORTHO05D009981 7.8e-08 62.0 202 26.2
CANSAT11G0949 Cannabis sativa HOM05D000125 ORTHO05D010101 1.3e-07 61.2 137 32.1
Duzib187G1128 Durio zibethinus HOM05D008014 ORTHO05D009981 1.3e-07 61.2 131 27.5
Duzib187G1720 Durio zibethinus HOM05D008014 ORTHO05D009981 1.3e-07 61.2 131 27.5
Duzib187G1989 Durio zibethinus HOM05D008014 ORTHO05D009981 1.3e-07 61.2 131 27.5
CANSAT11G2286 Cannabis sativa HOM05D000125 ORTHO05D010101 1.7e-07 60.8 134 29.1
Gohir.D13G153000 Gossypium hirsutum HOM05D008014 ORTHO05D009981 1.7e-07 60.8 138 26.8
Thecc.07G105600 Theobroma cacao HOM05D008014 ORTHO05D009981 1.7e-07 60.8 163 25.2
CANSAT11G2153 Cannabis sativa HOM05D000125 ORTHO05D010101 2.3e-07 60.5 176 27.3
Gohir.A13G148400 Gossypium hirsutum HOM05D008014 ORTHO05D009981 2.3e-07 60.5 138 26.1
CANSAT11G2008 Cannabis sativa HOM05D000125 ORTHO05D010101 3.0e-07 60.1 180 23.3
Gorai.013G172900 Gossypium raimondii HOM05D008014 ORTHO05D009981 3.0e-07 60.1 138 26.1
QL09p045403 Quercus lobata HOM05D000125 ORTHO05D010101 3.0e-07 60.1 125 36.0
Thecc.03G303400 Theobroma cacao HOM05D008014 ORTHO05D009981 3.0e-07 60.1 202 24.8
COL.COLO4_10756 Corchorus olitorius HOM05D008014 ORTHO05D009981 3.9e-07 59.7 161 26.1
Gorai.004G189200 Gossypium raimondii HOM05D008014 ORTHO05D009981 5.1e-07 59.3 97 30.9
Thecc.04G233100 Theobroma cacao HOM05D021021 ORTHO05D022794 5.1e-07 59.3 130 29.2
Gorai.004G189300 Gossypium raimondii HOM05D013541 ORTHO05D009981 6.6e-07 58.9 104 30.8
Thecc.03G303500 Theobroma cacao HOM05D008014 ORTHO05D009981 6.6e-07 58.9 197 26.4
Gohir.D08G180550 Gossypium hirsutum HOM05D008014 ORTHO05D009981 8.7e-07 58.5 97 30.9
Duzib168G0242 Durio zibethinus HOM05D008014 ORTHO05D009981 1.1e-06 58.2 147 22.4
CANSAT11G0780 Cannabis sativa HOM05D000125 ORTHO05D010101 1.5e-06 57.8 140 29.3
Thecc.07G106000 Theobroma cacao HOM05D008014 ORTHO05D009981 1.5e-06 57.8 219 24.2
Gorai.009G369900 Gossypium raimondii HOM05D008014 ORTHO05D009981 1.9e-06 57.4 104 27.9
COL.COLO4_10755 Corchorus olitorius HOM05D008014 ORTHO05D009981 9.6e-06 55.1 168 26.8


User provided reference genes

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