Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p023249 Quercus lobata HOM05D007316 ORTHO05D009393 2.2e-60 235.3 112 100.0
QL02p030600 Quercus lobata HOM05D007316 ORTHO05D009393 2.3e-33 145.6 72 98.6
QL09p015786 Quercus lobata HOM05D007316 ORTHO05D009393 3.0e-33 145.2 72 98.6
Eucgr.H00565 Eucalyptus grandis HOM05D007316 ORTHO05D009393 6.7e-25 117.5 90 66.7
Manes.17G057300 Manihot esculenta HOM05D007316 ORTHO05D009393 2.0e-24 115.9 63 84.1
Hma1.2p1_0157F.1_g069460 Hydrangea macrophylla HOM05D007316 ORTHO05D009393 1.3e-23 113.2 63 84.1
THA.LOC104813939 Tarenaya hassleriana HOM05D007316 ORTHO05D009393 1.7e-23 112.8 63 82.5
A07p29930 Brassica napus HOM05D007316 ORTHO05D009393 2.2e-23 112.5 63 82.5
C06p34200 Brassica napus HOM05D007316 ORTHO05D009393 2.2e-23 112.5 63 82.5
BolC6t38541H Brassica oleracea HOM05D007316 ORTHO05D009393 2.2e-23 112.5 63 82.5
BraA07t30632Z Brassica rapa HOM05D007316 ORTHO05D009393 2.2e-23 112.5 63 82.5
Ca_09261_v3 Cicer arietinum L. HOM05D007316 ORTHO05D009393 2.2e-23 112.5 63 84.1
Cfa016046 Carpinus fangiana HOM05D007316 ORTHO05D009393 2.8e-23 112.1 63 84.1
Ciclev10023234m.g Citrus clementina HOM05D007316 ORTHO05D009393 2.8e-23 112.1 63 84.1
Phvul.001G220400 Phaseolus vulgaris HOM05D007316 ORTHO05D009393 2.8e-23 112.1 63 82.5
GSVIVG01029768001 Vitis vinifera HOM05D007316 ORTHO05D009393 2.8e-23 112.1 63 82.5
Duzib128G0483 Durio zibethinus HOM05D007316 ORTHO05D009393 4.8e-23 111.3 63 81.0
CSS0014503 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 6.3e-23 110.9 62 82.3
CSS0021979 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 6.3e-23 110.9 62 82.3
Psat3g015560 Pisum sativum HOM05D007316 ORTHO05D009393 6.3e-23 110.9 63 79.4
Medtr7g111090 Medicago truncatula HOM05D007316 ORTHO05D009393 8.2e-23 110.5 63 82.5
CANSAT56G2903 Cannabis sativa HOM05D007316 ORTHO05D009393 1.1e-22 110.2 63 82.5
RcHm_v2.0_Chr4g0387941 Rosa chinensis HOM05D007316 ORTHO05D009393 1.1e-22 110.2 63 76.2
Aa31LG4G3460 Aethionema arabicum HOM05D007316 ORTHO05D009393 1.4e-22 109.8 63 81.0
Sp5g28140 Schrenkiella parvula HOM05D007316 ORTHO05D009393 1.4e-22 109.8 63 79.4
CSS0015421 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 1.8e-22 109.4 62 80.6
FvH4_4g00490 Fragaria vesca HOM05D007316 ORTHO05D009393 1.8e-22 109.4 63 76.2
FAN12G3999 Fragaria x ananassa HOM05D007316 ORTHO05D009393 1.8e-22 109.4 63 76.2
FAN17G1024 Fragaria x ananassa HOM05D007316 ORTHO05D009393 1.8e-22 109.4 63 76.2
FAN22G1131 Fragaria x ananassa HOM05D007316 ORTHO05D009393 1.8e-22 109.4 63 76.2
Thecc.05G261200 Theobroma cacao HOM05D007316 ORTHO05D009393 1.8e-22 109.4 63 81.0
Glyma.19G223500 Glycine max HOM05D007316 ORTHO05D009393 2.4e-22 109.0 63 81.0
RcHm_v2.0_Chr4g0385941 Rosa chinensis HOM05D007316 ORTHO05D009393 2.4e-22 109.0 63 76.2
Cc02_g36870 Coffea canephora HOM05D007316 ORTHO05D009393 3.1e-22 108.6 62 87.1
Duzib106G1284 Durio zibethinus HOM05D007316 ORTHO05D009393 3.1e-22 108.6 63 79.4
Lj1g0006735 Lotus japonicus HOM05D007316 ORTHO05D009393 4.1e-22 108.2 63 77.8
RcHm_v2.0_Chr4g0387841 Rosa chinensis HOM05D007316 ORTHO05D009393 4.1e-22 108.2 63 74.6
CsaV3_2G036390 Cucumis sativus L. HOM05D007316 ORTHO05D009393 5.3e-22 107.8 63 82.5
Gohir.D13G105800 Gossypium hirsutum HOM05D007316 ORTHO05D009393 5.3e-22 107.8 63 79.4
Sed0015703 Sechium edule HOM05D007316 ORTHO05D009393 7.0e-22 107.5 63 81.0
AL2G32940 Arabidopsis lyrata HOM05D007316 ORTHO05D009393 9.1e-22 107.1 63 79.4
Glyma.03G226500 Glycine max HOM05D007316 ORTHO05D009393 9.1e-22 107.1 63 79.4
ClCG09G016900 Citrullus lanatus HOM05D007316 ORTHO05D009393 1.2e-21 106.7 63 81.0
AT1G73177 Arabidopsis thaliana HOM05D007316 ORTHO05D009393 1.6e-21 106.3 63 77.8
arahy.Tifrunner.gnm1.ann1.AE1MMP Arachis hypogaea HOM05D007316 ORTHO05D009393 1.6e-21 106.3 63 77.8
arahy.Tifrunner.gnm1.ann1.CUXT1U Arachis hypogaea HOM05D007316 ORTHO05D009393 1.6e-21 106.3 63 77.8
MELO3C021892.2 Cucumis melo HOM05D007316 ORTHO05D009393 1.6e-21 106.3 63 81.0
Potri.004G058400 Populus trichocarpa HOM05D007316 ORTHO05D009393 1.6e-21 106.3 63 77.8
Atru.chr12.1494 Acer truncatum HOM05D007316 ORTHO05D009393 2.6e-21 105.5 63 79.4
CARHR066170 Cardamine hirsuta HOM05D007316 ORTHO05D009393 2.6e-21 105.5 63 79.4
Cpa.g.sc233.10 Carica papaya HOM05D007316 ORTHO05D009393 2.6e-21 105.5 64 81.2
Prupe.3G122600 Prunus persica HOM05D007316 ORTHO05D009393 2.6e-21 105.5 63 77.8
CSS0022236 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 5.9e-21 104.4 62 79.0
Carub.0002s1996 Capsella rubella HOM05D007316 ORTHO05D009393 5.9e-21 104.4 63 76.2
Migut.B00683 Erythranthe guttata HOM05D007316 ORTHO05D009393 7.7e-21 104.0 63 76.2
Migut.B00911 Erythranthe guttata HOM05D007316 ORTHO05D009393 7.7e-21 104.0 63 76.2
Potri.011G067800 Populus trichocarpa HOM05D007316 ORTHO05D009393 7.7e-21 104.0 63 74.6
BcaC08g45665 Brassica carinata HOM05D007316 ORTHO05D009393 3.8e-20 101.7 78 66.7
SalBow3G1440 Salvia bowleyana HOM05D007316 ORTHO05D009393 5.0e-20 101.3 63 74.6
TWI23G0494 Tripterygium wilfordii HOM05D007316 ORTHO05D009393 8.5e-20 100.5 63 68.3
COL.COLO4_20544 Corchorus olitorius HOM05D007316 ORTHO05D009393 1.9e-19 99.4 64 75.0
Peaxi162Scf00071g00128 Petunia axillaris HOM05D007316 ORTHO05D009393 1.9e-19 99.4 60 73.3
HanXRQChr07g0193721 Helianthus annuus HOM05D007316 ORTHO05D009393 4.2e-19 98.2 60 75.0
Lalb_Chr04g0260251 Lupinus albus HOM05D007316 ORTHO05D009393 4.2e-19 98.2 61 75.4
MD09G1239400 Malus domestica HOM05D007316 ORTHO05D009393 5.5e-19 97.8 72 66.7
Sopen08g002530 Solanum pennellii HOM05D007316 ORTHO05D009393 7.2e-19 97.4 62 74.2
PGSC0003DMG400026307 Solanum tuberosum HOM05D007316 ORTHO05D009393 1.2e-18 96.7 62 72.6
Aqoxy7G02856 Aquilegia oxysepala HOM05D007316 ORTHO05D009393 1.6e-18 96.3 64 65.6
PGR119G2118 Punica granatum HOM05D007316 ORTHO05D009393 3.6e-18 95.1 63 69.8
Lsat_1_v5_gn_9_84180 Lactuca sativa HOM05D007316 ORTHO05D009393 8.0e-18 94.0 60 70.0
ECA236G4186 Erigeron canadensis HOM05D007316 ORTHO05D009393 5.7e-16 87.8 61 70.5
Thhalv10019421m.g Eutrema salsugineum HOM05D007316 ORTHO05D009393 7.0e-14 80.9 59 66.1
CiPaw.05G216300 Carya illinoinensis HOM05D007316 ORTHO05D009393 2.7e-13 79.0 51 72.5
TAR362G0014 Trochodendron aralioides HOM05D007316 ORTHO05D009393 1.0e-12 77.0 43 79.1
Oeu034759.1 Olea europaea HOM05D007316 ORTHO05D009393 3.8e-12 75.1 44 77.3
CSS0008863 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 6.5e-12 74.3 47 70.2
CSS0044079 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 6.5e-12 74.3 47 70.2
Os07g0633800 Oryza sativa ssp. japonica HOM05D007316 ORTHO05D009393 6.5e-12 74.3 60 55.0
GSVIVG01026029001 Vitis vinifera HOM05D007316 ORTHO05D009393 6.5e-12 74.3 44 75.0
CSS0044918 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 8.5e-12 73.9 45 71.1
CSS0047183 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 8.5e-12 73.9 45 71.1
CSS0028514 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 1.5e-11 73.2 57 56.1
Nn7g37509 Nelumbo nucifera HOM05D007316 ORTHO05D009393 2.5e-11 72.4 42 76.2
CSS0021742 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 5.5e-11 71.2 48 66.7
CSS0025187 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 7.2e-11 70.9 45 66.7
vmacro19806 Vaccinium macrocarpon HOM05D007316 ORTHO05D009393 9.4e-11 70.5 43 74.4
CSS0047605 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 2.7e-10 68.9 45 64.4
Gorai.013G118500 Gossypium raimondii HOM05D007316 ORTHO05D009393 1.0e-09 67.0 63 57.1
MBI18_g28941_MAGBIO Magnolia biondii HOM05D000032 ORTHO05D004701 1.4e-09 66.6 44 63.6
Actinidia11709 Actinidia chinensis HOM05D007316 ORTHO05D009393 1.8e-09 66.2 34 82.4
AUR62021328 Chenopodium quinoa HOM05D007316 ORTHO05D009393 1.5e-08 63.2 43 67.4
EL10Ac8g18312 Beta vulgaris HOM05D007316 ORTHO05D009393 2.6e-08 62.4 43 67.4
Gohir.A13G102600 Gossypium hirsutum HOM05D007316 ORTHO05D009393 2.6e-08 62.4 63 54.0
Mapoly0010s0075 Marchantia polymorpha HOM05D007316 ORTHO05D009393 5.7e-08 61.2 56 48.2
Ah.09g230190 Amaranthus hybridus HOM05D007316 ORTHO05D009393 2.8e-07 58.9 43 60.5
CAN.G530.4 Capsicum annuum HOM05D007316 ORTHO05D009393 3.7e-07 58.5 38 68.4
Rhsim05G0117300 Rhododendron simsii HOM05D007316 ORTHO05D009393 1.1e-06 57.0 64 48.4
RhsimUnG0015700 Rhododendron simsii HOM05D007316 ORTHO05D009393 1.1e-06 57.0 64 48.4
Solyc08g006570.4 Solanum lycopersicum HOM05D007316 ORTHO05D009393 1.1e-06 57.0 35 71.4


User provided reference genes

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