Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p022007 Quercus lobata HOM05D020237 ORTHO05D000062 3.0e-117 425.2 225 100.0
QL02p061961 Quercus lobata HOM05D020237 ORTHO05D000062 8.4e-59 231.1 122 99.2
QL04p092704 Quercus lobata HOM05D000107 ORTHO05D000062 1.5e-52 210.3 122 91.0
QL02p061962 Quercus lobata HOM05D020237 ORTHO05D337387 4.6e-49 198.7 103 100.0
QL05p067951 Quercus lobata HOM05D020237 ORTHO05D337758 1.9e-34 150.2 94 87.2
QL11p017511 Quercus lobata HOM05D020237 ORTHO05D000062 3.0e-32 142.9 124 57.3
QL12p004648 Quercus lobata HOM05D000107 ORTHO05D000062 3.6e-17 92.8 144 41.0
QL10p049307 Quercus lobata HOM05D020237 ORTHO05D000062 1.4e-16 90.9 89 50.6
Rhsim01G0178800 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.7e-14 82.8 88 44.3
CSS0009906 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 8.2e-14 81.6 103 41.7
Rhsim11G0004800 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-13 81.3 104 40.4
CSS0018298 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.3e-13 79.0 108 42.6
CSS0030837 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.3e-13 79.0 108 42.6
CSS0044341 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.3e-13 79.0 103 40.8
CSS0048713 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.3e-13 79.0 103 40.8
CSS0014451 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 7.0e-13 78.6 108 42.6
CSS0023291 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 7.0e-13 78.6 103 40.8
Rhsim04G0055300 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.0e-13 78.6 88 42.0
CSS0021554 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 9.1e-13 78.2 103 40.8
CSS0043289 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 9.1e-13 78.2 103 40.8
Rhsim04G0054900 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.0e-12 77.0 88 42.0
CSS0013777 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 3.5e-12 76.3 103 39.8
Aqoxy6G01994 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 1.3e-11 74.3 110 32.7
Aqoxy2G02171 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 3.8e-11 72.8 110 32.7
QL02p079634 Quercus lobata HOM05D000107 ORTHO05D000062 3.8e-11 72.8 92 42.4
Aqoxy4G02090 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 2.7e-09 66.6 104 31.7
MBI19_g18418_MAGBIO Magnolia biondii HOM05D000107 ORTHO05D000062 1.0e-08 64.7 83 38.6
CANSAT11G2258 Cannabis sativa HOM05D000107 ORTHO05D000062 1.4e-08 64.3 100 37.0
Aqoxy2G01646 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 1.8e-08 63.9 104 29.8
TAR003G0008 Trochodendron aralioides HOM05D000107 ORTHO05D000062 1.8e-08 63.9 109 34.9
Ca_08868_v3 Cicer arietinum L. HOM05D001309 ORTHO05D000385 3.0e-08 63.2 100 34.0
TAR165G0003 Trochodendron aralioides HOM05D000107 ORTHO05D000062 3.0e-08 63.2 109 34.9
RhsimUnG0245800 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.2e-08 62.4 103 34.0
TAR528G0005 Trochodendron aralioides HOM05D000107 ORTHO05D000062 5.2e-08 62.4 87 39.1
TAR541G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000062 8.8e-08 61.6 107 35.5
QL08p034606 Quercus lobata HOM05D039047 ORTHO05D000062 1.1e-07 61.2 80 42.5
TAR344G0006 Trochodendron aralioides HOM05D000107 ORTHO05D000062 1.1e-07 61.2 88 33.0
AUR62037786 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.5e-07 60.8 88 37.5
ECA236G1122 Erigeron canadensis HOM05D009609 ORTHO05D011572 1.5e-07 60.8 51 47.1
Os01g0768600 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 1.5e-07 60.8 97 32.0
TAR211G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000062 1.5e-07 60.8 109 33.0
EL10Ac2g03191 Beta vulgaris HOM05D000107 ORTHO05D000062 2.0e-07 60.5 83 32.5
CSS0004309 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.0e-07 60.5 110 34.5
Nn7g37794 Nelumbo nucifera HOM05D000107 ORTHO05D000062 2.6e-07 60.1 39 61.5
Os12g0544600 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 3.3e-07 59.7 97 32.0
QL07p012868 Quercus lobata HOM05D000107 ORTHO05D000062 4.4e-07 59.3 73 43.8
CSS0004152 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.7e-07 58.9 110 34.5
CSS0007472 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.7e-07 58.9 111 37.8
CSS0018002 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.7e-07 58.9 109 34.9
CSS0036122 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.7e-07 58.9 109 34.9
CSS0047073 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.7e-07 58.9 109 34.9
Rhsim02G0220700 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.7e-07 58.9 102 31.4
TAR634G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000062 5.7e-07 58.9 106 34.0
CSS0007461 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 7.5e-07 58.5 109 34.9
CSS0007710 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 7.5e-07 58.5 109 34.9
CSS0009480 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 7.5e-07 58.5 109 34.9
CSS0028705 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 7.5e-07 58.5 109 34.9
CSS0031171 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 7.5e-07 58.5 109 34.9
Atru.chr1.768 Acer truncatum HOM05D000107 ORTHO05D000062 9.7e-07 58.2 90 38.9
Nn1g06875 Nelumbo nucifera HOM05D000107 ORTHO05D000062 9.7e-07 58.2 39 61.5
Atru.chr4.2612 Acer truncatum HOM05D000107 ORTHO05D000062 1.3e-06 57.8 90 37.8
CANSAT78G1492 Cannabis sativa HOM05D000107 ORTHO05D000062 1.3e-06 57.8 86 33.7
PSO566G0060 Papaver somniferum HOM05D000107 ORTHO05D000062 1.3e-06 57.8 110 38.2
Rhsim06G0085100 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-06 57.8 102 31.4
CSS0013241 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.7e-06 57.4 109 34.9
CSS0026161 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.7e-06 57.4 109 34.9
CANSAT78G2036 Cannabis sativa HOM05D000107 ORTHO05D000062 1.7e-06 57.4 86 34.9
Nn8g40829 Nelumbo nucifera HOM05D000107 ORTHO05D000062 1.7e-06 57.4 39 59.0
Rhsim08G0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.2e-06 57.0 84 35.7
AUR62040738 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.8e-06 56.6 41 53.7
Nn1g07035 Nelumbo nucifera HOM05D000107 ORTHO05D000062 2.8e-06 56.6 117 31.6
PSO213G0001 Papaver somniferum HOM05D000107 ORTHO05D000062 2.8e-06 56.6 82 42.7
TAR266G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000062 2.8e-06 56.6 55 50.9
EL10Ac5g11714 Beta vulgaris HOM05D000107 ORTHO05D000062 3.7e-06 56.2 42 50.0
EL10Ac7g16605 Beta vulgaris HOM05D000107 ORTHO05D000062 3.7e-06 56.2 41 51.2
EL10Ac7g17482 Beta vulgaris HOM05D000107 ORTHO05D000062 3.7e-06 56.2 41 51.2
EL10Ac7g18149 Beta vulgaris HOM05D000107 ORTHO05D000062 3.7e-06 56.2 41 51.2
Rhsim01G0072500 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.7e-06 56.2 93 38.7
EL10Ac5g11735 Beta vulgaris HOM05D000107 ORTHO05D000062 4.8e-06 55.8 37 64.9
AUR62025907 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.8e-06 55.8 41 56.1
EL10Ac2g03283 Beta vulgaris HOM05D000107 ORTHO05D000062 6.3e-06 55.5 40 52.5
CSS0000324 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 8.2e-06 55.1 117 30.8
ECA232G4762 Erigeron canadensis HOM05D000107 ORTHO05D000062 8.2e-06 55.1 43 53.5
ECA238G0623 Erigeron canadensis HOM05D000107 ORTHO05D000001 8.2e-06 55.1 43 53.5


User provided reference genes

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