Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p021383 Quercus lobata HOM05D006991 ORTHO05D009188 1.2e-118 429.9 213 100.0
QL08p049512 Quercus lobata HOM05D006991 ORTHO05D009188 1.9e-89 332.8 165 99.4
Haze_15467 Corylus avellana HOM05D006991 ORTHO05D009188 7.2e-68 261.2 148 87.8
CiPaw.02G028700 Carya illinoinensis HOM05D006991 ORTHO05D009188 3.9e-66 255.4 159 81.8
Cfa003952 Carpinus fangiana HOM05D006991 ORTHO05D009188 8.8e-66 254.2 154 84.4
Prupe.2G164100 Prunus persica HOM05D006991 ORTHO05D009188 2.5e-65 252.7 158 81.6
Potri.002G157400 Populus trichocarpa HOM05D006991 ORTHO05D009188 4.8e-64 248.4 155 78.7
GSVIVG01026850001 Vitis vinifera HOM05D006991 ORTHO05D009188 4.8e-64 248.4 156 77.6
Sabra02G0125100 Salix brachista HOM05D006991 ORTHO05D009188 2.4e-63 246.1 155 78.1
CANSAT56G3382 Cannabis sativa HOM05D006991 ORTHO05D009188 5.3e-63 245.0 160 75.6
Lj3g0006815 Lotus japonicus HOM05D006991 ORTHO05D009188 1.2e-62 243.8 161 75.8
Ciclev10019238m.g Citrus clementina HOM05D006991 ORTHO05D009188 1.5e-62 243.4 156 77.6
Phvul.010G096000 Phaseolus vulgaris HOM05D006991 ORTHO05D009188 2.6e-62 242.7 162 74.1
COL.COLO4_12678 Corchorus olitorius HOM05D006991 ORTHO05D009188 4.5e-62 241.9 156 76.9
Duzib138G0243 Durio zibethinus HOM05D006991 ORTHO05D009188 5.9e-62 241.5 158 78.5
Lalb_Chr04g0256761 Lupinus albus HOM05D006991 ORTHO05D009188 7.7e-62 241.1 161 74.5
Glyma.07G073500 Glycine max HOM05D006991 ORTHO05D009188 1.0e-61 240.7 157 75.2
TPR.G4402 Trifolium pratense HOM05D006991 ORTHO05D009188 1.3e-61 240.4 156 74.4
Medtr8g031480 Medicago truncatula HOM05D006991 ORTHO05D009188 1.7e-61 240.0 156 74.4
Thecc.01G363100 Theobroma cacao HOM05D006991 ORTHO05D009188 1.1e-60 237.3 156 76.3
Gohir.D07G148700 Gossypium hirsutum HOM05D006991 ORTHO05D009188 4.2e-60 235.3 156 74.4
MD01G1054400 Malus domestica HOM05D006991 ORTHO05D009188 9.4e-60 234.2 141 82.3
Gohir.A07G142900 Gossypium hirsutum HOM05D006991 ORTHO05D009188 1.2e-59 233.8 156 73.7
Manes.01G259800 Manihot esculenta HOM05D006991 ORTHO05D009188 1.2e-59 233.8 158 72.8
FvH4_7g13830 Fragaria vesca HOM05D006991 ORTHO05D009188 1.6e-59 233.4 156 76.9
Gorai.001G170100 Gossypium raimondii HOM05D006991 ORTHO05D009188 1.6e-59 233.4 156 73.7
FAN03G2057 Fragaria x ananassa HOM05D006991 ORTHO05D009188 2.7e-59 232.6 158 75.3
RcHm_v2.0_Chr1g0354041 Rosa chinensis HOM05D006991 ORTHO05D009188 2.7e-59 232.6 156 76.9
TWI23G0867 Tripterygium wilfordii HOM05D006991 ORTHO05D009188 3.6e-59 232.3 157 75.8
Ca_23659_v3 Cicer arietinum L. HOM05D006991 ORTHO05D009188 6.1e-59 231.5 168 69.0
Psat4g154080 Pisum sativum HOM05D006991 ORTHO05D009188 7.9e-59 231.1 156 72.4
TAR375G0043 Trochodendron aralioides HOM05D006991 ORTHO05D009188 1.0e-58 230.7 177 67.8
Dinv43786 Davidia involucrata HOM05D006991 ORTHO05D009188 5.1e-58 228.4 153 72.5
Sed0028010 Sechium edule HOM05D006991 ORTHO05D009188 3.3e-57 225.7 143 76.9
Cpa.g.sc18.226 Carica papaya HOM05D006991 ORTHO05D009188 1.7e-56 223.4 169 67.5
ClCG05G001680 Citrullus lanatus HOM05D006991 ORTHO05D009188 1.7e-56 223.4 166 68.1
VMungo0331G1855 Vigna mungo HOM05D006991 ORTHO05D009188 6.3e-56 221.5 141 77.3
MELO3C006127.2 Cucumis melo HOM05D006991 ORTHO05D009188 4.1e-55 218.8 163 66.9
FAN10G0464 Fragaria x ananassa HOM05D006991 ORTHO05D009188 5.3e-55 218.4 183 65.0
Nn6g33525 Nelumbo nucifera HOM05D006991 ORTHO05D009188 7.0e-55 218.0 174 62.1
AUR62004323 Chenopodium quinoa HOM05D006991 ORTHO05D009188 1.2e-54 217.2 155 67.7
FAN06G2381 Fragaria x ananassa HOM05D006991 ORTHO05D009188 4.5e-54 215.3 194 61.9
Hma1.2p1_0001F.1_g001590 Hydrangea macrophylla HOM05D006991 ORTHO05D009188 4.5e-54 215.3 150 70.0
Ah.05g176510 Amaranthus hybridus HOM05D006991 ORTHO05D009188 2.2e-53 213.0 155 68.4
Aa31LG1G11140 Aethionema arabicum HOM05D006991 ORTHO05D009188 2.9e-53 212.6 151 65.6
PGR042G0621 Punica granatum HOM05D006991 ORTHO05D009188 1.5e-52 210.3 151 66.2
ATR0680G083 Amborella trichopoda HOM05D006991 ORTHO05D009188 4.2e-52 208.8 158 65.8
Sp1g00530 Schrenkiella parvula HOM05D006991 ORTHO05D009188 5.5e-52 208.4 146 67.1
Hund27298 Selenicereus undatus HOM05D006991 ORTHO05D002850 7.2e-52 208.0 144 70.1
CARHR000550 Cardamine hirsuta HOM05D006991 ORTHO05D009188 3.6e-51 205.7 147 67.3
Lsat_1_v5_gn_7_5201 Lactuca sativa HOM05D006991 ORTHO05D009188 4.7e-51 205.3 161 62.1
Nitab4.5_0009210g0040 Nicotiana tabacum HOM05D006991 ORTHO05D009188 4.7e-51 205.3 163 62.0
CsaV3_3G009060 Cucumis sativus L. HOM05D006991 ORTHO05D009188 6.1e-51 204.9 153 68.0
Thhalv10007047m.g Eutrema salsugineum HOM05D006991 ORTHO05D009188 1.0e-50 204.1 151 64.2
AT1G01770 Arabidopsis thaliana HOM05D006991 ORTHO05D009188 1.4e-50 203.8 146 68.5
Zm00001eb306550 Zea mays HOM05D006991 ORTHO05D009188 1.4e-50 203.8 145 66.2
CAN.G78.50 Capsicum annuum HOM05D006991 ORTHO05D009188 1.8e-50 203.4 163 60.7
BolC8t52898H Brassica oleracea HOM05D006991 ORTHO05D009188 2.3e-50 203.0 151 66.9
DCAR_015941 Daucus carota HOM05D006991 ORTHO05D009188 3.0e-50 202.6 161 59.6
Nitab4.5_0002160g0070 Nicotiana tabacum HOM05D006991 ORTHO05D009188 4.0e-50 202.2 163 60.7
Peaxi162Scf00020g00011 Petunia axillaris HOM05D006991 ORTHO05D009188 6.7e-50 201.4 163 60.1
Cc02_g37710 Coffea canephora HOM05D006991 ORTHO05D009188 8.8e-50 201.1 164 59.1
Os07g0457300 Oryza sativa ssp. japonica HOM05D006991 ORTHO05D009188 1.1e-49 200.7 131 68.7
Carub.0001s0044 Capsella rubella HOM05D006991 ORTHO05D009188 1.5e-49 200.3 159 61.0
THA.LOC104801448 Tarenaya hassleriana HOM05D006991 ORTHO05D009188 1.5e-49 200.3 150 61.3
ECA236G3544 Erigeron canadensis HOM05D006991 ORTHO05D009188 3.3e-49 199.1 161 59.0
Eucgr.E00177 Eucalyptus grandis HOM05D006991 ORTHO05D009188 3.3e-49 199.1 163 63.2
AL1G10570 Arabidopsis lyrata HOM05D006991 ORTHO05D009188 4.4e-49 198.7 146 65.8
FAN01G0340 Fragaria x ananassa HOM05D006991 ORTHO05D009188 5.7e-49 198.4 182 61.5
FAN06G3007 Fragaria x ananassa HOM05D006991 ORTHO05D009188 5.7e-49 198.4 182 61.5
Sc26g0001000 Simmondsia chinensis HOM05D006991 ORTHO05D009188 5.7e-49 198.4 133 75.9
PGSC0003DMG400000156 Solanum tuberosum HOM05D006991 ORTHO05D009188 5.7e-49 198.4 158 60.1
HanXRQChr04g0121651 Helianthus annuus HOM05D006991 ORTHO05D009188 1.7e-48 196.8 161 59.0
BraA09t42261Z Brassica rapa HOM05D006991 ORTHO05D009188 3.7e-48 195.7 161 60.9
C08p53830 Brassica napus HOM05D006991 ORTHO05D009188 6.3e-48 194.9 161 60.9
Sopen01g038120 Solanum pennellii HOM05D006991 ORTHO05D009188 6.3e-48 194.9 163 57.7
Lj9A581T68 Lonicera japonica HOM05D006991 ORTHO05D009188 1.4e-47 193.7 142 66.2
AUR62003727 Chenopodium quinoa HOM05D001417 ORTHO05D001496 1.8e-47 193.4 141 67.4
Aqoxy5G03423_Aqoxy5G03424 Aquilegia oxysepala HOM05D006991 ORTHO05D009188 3.1e-47 192.6 150 64.0
MSTRG.28216 Avicennia marina HOM05D006991 ORTHO05D009188 3.1e-47 192.6 150 63.3
PSO063G6634 Papaver somniferum HOM05D006991 ORTHO05D009188 9.1e-47 191.0 151 64.2
CDE05G1529 Ceratophyllum demersum HOM05D006991 ORTHO05D009188 1.2e-46 190.7 148 62.8
CSS0000914 Camellia sinensis var. sinensis HOM05D006991 ORTHO05D009188 4.5e-46 188.7 133 67.7
SGA_v2.0_scaffold43G16441 Striga asiatica HOM05D006991 ORTHO05D009188 5.9e-46 188.3 150 62.0
Migut.N01431 Erythranthe guttata HOM05D006991 ORTHO05D009188 1.3e-45 187.2 164 59.1
Solyc01g094330.3 Solanum lycopersicum HOM05D006991 ORTHO05D009188 2.9e-45 186.0 141 62.4
CSS0011179 Camellia sinensis var. sinensis HOM05D006991 ORTHO05D009188 5.5e-44 181.8 135 65.2
Atru.chr5.484 Acer truncatum HOM05D006991 ORTHO05D009188 9.4e-44 181.0 116 78.4
vmacro13305 Vaccinium macrocarpon HOM05D006991 ORTHO05D009188 1.8e-42 176.8 150 58.7
arahy.Tifrunner.gnm1.ann1.JH251T Arachis hypogaea HOM05D006991 ORTHO05D009188 2.3e-42 176.4 153 61.4
SalBow5G3488 Salvia bowleyana HOM05D006991 ORTHO05D009188 4.0e-42 175.6 136 63.2
SalBow5G3803 Salvia bowleyana HOM05D006991 ORTHO05D009188 4.0e-42 175.6 136 63.2
Rhsim07G0017800 Rhododendron simsii HOM05D006991 ORTHO05D009188 4.4e-41 172.2 150 58.0
EL10Ac1g00536 Beta vulgaris HOM05D006991 ORTHO05D009188 3.7e-40 169.1 111 72.1
HPP92_004979 Vanilla planifolia HOM05D006991 ORTHO05D009188 8.3e-40 167.9 133 58.6
RcHm_v2.0_Chr1g0354021 Rosa chinensis HOM05D006991 ORTHO05D009188 2.4e-39 166.4 108 75.0
arahy.Tifrunner.gnm1.ann1.NT7Z8Q Arachis hypogaea HOM05D006991 ORTHO05D009188 9.1e-39 164.5 152 58.6
Actinidia10005 Actinidia chinensis HOM05D006991 ORTHO05D009188 4.5e-38 162.2 166 52.4
Pp3c9_2540 Physcomitrium patens HOM05D006991 ORTHO05D009188 1.5e-36 157.1 121 62.8
SMO164G0214 Selaginella moellendorffii HOM05D006991 ORTHO05D009188 2.1e-35 153.3 132 55.3
unitig_748.g7107 Utricularia gibba HOM05D006991 ORTHO05D009188 2.3e-34 149.8 99 69.7
HanXRQChr01g0021681 Helianthus annuus HOM05D006991 ORTHO05D009188 1.1e-28 131.0 120 55.8
CAN.G226.8 Capsicum annuum HOM05D006991 ORTHO05D000001 2.4e-23 113.2 63 82.5


User provided reference genes

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