Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p020622 Quercus lobata HOM05D004328 ORTHO05D005210 1.4e-155 552.7 258 100.0
Haze_00368 Corylus avellana HOM05D004328 ORTHO05D005210 7.7e-141 503.8 258 89.9
CiPaw.06G036200 Carya illinoinensis HOM05D004328 ORTHO05D005210 1.8e-137 492.7 258 88.8
arahy.Tifrunner.gnm1.ann1.BXRJ0F Arachis hypogaea HOM05D004328 ORTHO05D005210 9.1e-134 480.3 256 86.7
Ca_24428_v3 Cicer arietinum L. HOM05D004328 ORTHO05D005210 1.7e-132 476.1 255 85.9
Duzib177G0674 Durio zibethinus HOM05D004328 ORTHO05D005210 3.8e-132 474.9 253 85.8
TWI60G0134 Tripterygium wilfordii HOM05D004328 ORTHO05D005210 3.8e-132 474.9 258 83.7
Glyma.11G008400 Glycine max HOM05D004328 ORTHO05D005210 1.1e-131 473.4 255 84.7
Thecc.05G223000 Theobroma cacao HOM05D004328 ORTHO05D005210 1.1e-131 473.4 253 85.4
Psat2g189640 Pisum sativum HOM05D004328 ORTHO05D005210 1.9e-131 472.6 267 81.6
Glyma.01G234500 Glycine max HOM05D004328 ORTHO05D005210 2.5e-131 472.2 261 83.1
MD14G1015000 Malus domestica HOM05D004328 ORTHO05D005210 9.4e-131 470.3 258 84.5
RcHm_v2.0_Chr3g0472051 Rosa chinensis HOM05D004328 ORTHO05D005210 9.4e-131 470.3 255 85.1
Duzib128G0566 Durio zibethinus HOM05D004328 ORTHO05D005210 1.2e-130 469.9 253 84.2
Prupe.7G118400 Prunus persica HOM05D004328 ORTHO05D005210 3.6e-130 468.4 258 84.9
TPR.G37879 Trifolium pratense HOM05D004328 ORTHO05D005210 3.6e-130 468.4 264 81.1
CiPaw.05G212500 Carya illinoinensis HOM05D004328 ORTHO05D005210 8.0e-130 467.2 258 82.2
FAN05G3798 Fragaria x ananassa HOM05D004328 ORTHO05D005210 8.0e-130 467.2 252 84.9
VMungo1215G1960 Vigna mungo HOM05D004328 ORTHO05D005210 1.0e-129 466.8 261 83.1
FvH4_6g17800 Fragaria vesca HOM05D004328 ORTHO05D005210 1.8e-129 466.1 255 83.9
FAN02G3409 Fragaria x ananassa HOM05D004328 ORTHO05D005210 2.3e-129 465.7 252 84.5
FAN05G2947 Fragaria x ananassa HOM05D004328 ORTHO05D005210 4.0e-129 464.9 252 84.5
MD12G1017300 Malus domestica HOM05D004328 ORTHO05D005210 5.2e-129 464.5 257 83.3
AL2G19530 Arabidopsis lyrata HOM05D004328 ORTHO05D005210 6.8e-129 464.2 257 82.5
Medtr6g046960 Medicago truncatula HOM05D004328 ORTHO05D005210 6.8e-129 464.2 257 81.7
Medtr5g007050 Medicago truncatula HOM05D004328 ORTHO05D005210 1.2e-128 463.4 257 81.7
Gohir.A08G221646 Gossypium hirsutum HOM05D004328 ORTHO05D005210 1.5e-128 463.0 253 83.0
Gohir.D08G240500 Gossypium hirsutum HOM05D004328 ORTHO05D005210 1.5e-128 463.0 253 83.4
Lalb_Chr09g0320061 Lupinus albus HOM05D004328 ORTHO05D005210 1.5e-128 463.0 257 81.3
Carub.0002s1013 Capsella rubella HOM05D004328 ORTHO05D005210 2.0e-128 462.6 257 82.5
Potri.011G117500 Populus trichocarpa HOM05D004328 ORTHO05D005210 2.6e-128 462.2 254 83.5
AT1G64980 Arabidopsis thaliana HOM05D004328 ORTHO05D005210 7.5e-128 460.7 257 82.1
Gorai.004G255800 Gossypium raimondii HOM05D004328 ORTHO05D005210 7.5e-128 460.7 253 83.0
Sp5g19300 Schrenkiella parvula HOM05D004328 ORTHO05D005210 9.8e-128 460.3 257 82.1
Atru.chr12.1869 Acer truncatum HOM05D004328 ORTHO05D005210 2.2e-127 459.1 258 82.2
Manes.08G160500 Manihot esculenta HOM05D004328 ORTHO05D005210 2.2e-127 459.1 256 82.8
Prupe.2G050300 Prunus persica HOM05D004328 ORTHO05D005210 2.2e-127 459.1 257 81.7
COL.COLO4_15130 Corchorus olitorius HOM05D004328 ORTHO05D005210 2.8e-127 458.8 253 83.8
CARHR056380 Cardamine hirsuta HOM05D004328 ORTHO05D005210 1.1e-126 456.8 255 82.7
LjContig00222g0018106 Lotus japonicus HOM05D004328 ORTHO05D005210 1.4e-126 456.4 256 80.9
Potri.019G042500 Populus trichocarpa HOM05D004328 ORTHO05D005210 3.1e-126 455.3 254 82.7
PGR102G1437 Punica granatum HOM05D004328 ORTHO05D005210 3.1e-126 455.3 245 84.1
Thhalv10019022m.g Eutrema salsugineum HOM05D004328 ORTHO05D005210 5.4e-126 454.5 257 80.9
Aa31LG2G2180 Aethionema arabicum HOM05D004328 ORTHO05D005210 7.0e-126 454.1 255 82.7
Sed0006415 Sechium edule HOM05D004328 ORTHO05D005210 7.0e-126 454.1 237 85.7
Manes.09G129900 Manihot esculenta HOM05D004328 ORTHO05D005210 9.1e-126 453.8 258 80.6
Sed0022403 Sechium edule HOM05D004328 ORTHO05D005210 1.6e-125 453.0 241 84.6
Phvul.002G041900 Phaseolus vulgaris HOM05D004328 ORTHO05D005210 2.0e-125 452.6 256 80.9
Sabra11G0102700 Salix brachista HOM05D004328 ORTHO05D005210 7.7e-125 450.7 255 81.6
THA.LOC104823797 Tarenaya hassleriana HOM05D004328 ORTHO05D005210 1.3e-124 449.9 251 81.3
Sabra19G0052600 Salix brachista HOM05D004328 ORTHO05D005210 5.0e-124 448.0 254 81.1
Phvul.011G017300 Phaseolus vulgaris HOM05D004328 ORTHO05D005210 8.5e-124 447.2 243 80.7
MELO3C003305.2 Cucumis melo HOM05D004328 ORTHO05D005210 1.5e-123 446.4 257 79.4
Ciclev10032525m.g Citrus clementina HOM05D004328 ORTHO05D005210 1.9e-123 446.0 251 82.9
CSS0022667 Camellia sinensis var. sinensis HOM05D004328 ORTHO05D005210 3.2e-123 445.3 254 78.3
Sc10g0005470 Simmondsia chinensis HOM05D004328 ORTHO05D005210 9.4e-123 443.7 253 79.4
Glyma.12G014400 Glycine max HOM05D004328 ORTHO05D005210 2.7e-122 442.2 241 82.2
Gohir.A02G114200 Gossypium hirsutum HOM05D004328 ORTHO05D005210 2.7e-122 442.2 251 80.1
Gorai.003G058000 Gossypium raimondii HOM05D004328 ORTHO05D005210 2.7e-122 442.2 251 80.1
THA.LOC104805717 Tarenaya hassleriana HOM05D004328 ORTHO05D005210 2.7e-122 442.2 245 82.4
Hma1.2p1_0317F.1_g123230 Hydrangea macrophylla HOM05D004328 ORTHO05D005210 4.7e-122 441.4 256 78.9
TAR629G0545 Trochodendron aralioides HOM05D004328 ORTHO05D005210 8.0e-122 440.7 259 80.3
Gohir.D03G055200 Gossypium hirsutum HOM05D004328 ORTHO05D005210 1.4e-121 439.9 251 79.7
Lj5C63T9 Lonicera japonica HOM05D004328 ORTHO05D005210 1.4e-121 439.9 258 79.5
Eucgr.F02577 Eucalyptus grandis HOM05D004328 ORTHO05D005210 5.2e-121 438.0 255 77.3
BcaB05g24072 Brassica carinata HOM05D004328 ORTHO05D005210 6.8e-121 437.6 255 78.0
Hma1.2p1_0682F.1_g202590 Hydrangea macrophylla HOM05D004328 ORTHO05D005210 1.2e-120 436.8 255 77.6
Peaxi162Scf00015g00027 Petunia axillaris HOM05D004328 ORTHO05D005210 1.2e-120 436.8 252 79.0
VMungo1127G1200 Vigna mungo HOM05D004328 ORTHO05D005210 2.0e-120 436.0 233 82.8
Carub.0005s0946 Capsella rubella HOM05D004328 ORTHO05D005210 3.4e-120 435.3 243 81.5
BraA02t06349Z Brassica rapa HOM05D004328 ORTHO05D005210 7.5e-120 434.1 244 79.1
BraA07t30899Z Brassica rapa HOM05D004328 ORTHO05D005210 7.5e-120 434.1 255 77.6
CAN.G395.24 Capsicum annuum HOM05D004328 ORTHO05D005210 9.8e-120 433.7 254 77.2
A02p12950 Brassica napus HOM05D004328 ORTHO05D005210 1.3e-119 433.3 244 78.7
Nitab4.5_0003848g0010 Nicotiana tabacum HOM05D004328 ORTHO05D005210 1.3e-119 433.3 254 76.0
SGA_v2.0_scaffold117G32383 Striga asiatica HOM05D004328 ORTHO05D005210 1.7e-119 433.0 232 81.5
A07p32730 Brassica napus HOM05D004328 ORTHO05D005210 2.2e-119 432.6 255 77.6
BolC6t38986H Brassica oleracea HOM05D004328 ORTHO05D005210 2.2e-119 432.6 255 77.6
Cc01_g03290 Coffea canephora HOM05D004328 ORTHO05D005210 2.2e-119 432.6 254 76.4
BcaB03g15334 Brassica carinata HOM05D004328 ORTHO05D005210 2.8e-119 432.2 255 77.6
BcaB03g15336 Brassica carinata HOM05D004328 ORTHO05D005210 2.8e-119 432.2 255 76.9
BcaC03g14669 Brassica carinata HOM05D004328 ORTHO05D005210 2.8e-119 432.2 254 77.2
C06p38940 Brassica napus HOM05D004328 ORTHO05D005210 2.8e-119 432.2 255 77.6
Actinidia28583 Actinidia chinensis HOM05D004328 ORTHO05D005210 3.7e-119 431.8 256 76.6
Nitab4.5_0002424g0020 Nicotiana tabacum HOM05D004328 ORTHO05D005210 6.3e-119 431.0 252 77.0
PGSC0003DMG400016515 Solanum tuberosum HOM05D004328 ORTHO05D005210 6.3e-119 431.0 236 80.1
Nitab4.5_0008539g0020 Nicotiana tabacum HOM05D004328 ORTHO05D005210 8.3e-119 430.6 249 77.1
C02p21060 Brassica napus HOM05D004328 ORTHO05D005210 1.1e-118 430.3 245 79.2
Lj9P505T43 Lonicera japonica HOM05D004328 ORTHO05D005210 1.1e-118 430.3 249 79.5
PSO063G4889 Papaver somniferum HOM05D004328 ORTHO05D005210 1.1e-118 430.3 247 79.8
Rhsim12G0195900 Rhododendron simsii HOM05D004328 ORTHO05D005210 1.1e-118 430.3 257 76.3
Nn3g21153 Nelumbo nucifera HOM05D004328 ORTHO05D005210 1.8e-118 429.5 253 76.7
Nitab4.5_0000862g0040 Nicotiana tabacum HOM05D004328 ORTHO05D005210 1.8e-118 429.5 254 76.4
EL10Ac9g21975 Beta vulgaris HOM05D004328 ORTHO05D005210 4.1e-118 428.3 241 81.3
AUR62011605 Chenopodium quinoa HOM05D004328 ORTHO05D005210 4.1e-118 428.3 238 81.5
Sopen06g025090 Solanum pennellii HOM05D004328 ORTHO05D005210 4.1e-118 428.3 234 79.5
BolC2t08247H Brassica oleracea HOM05D004328 ORTHO05D005210 5.4e-118 427.9 245 78.8
Nn8g40188 Nelumbo nucifera HOM05D004328 ORTHO05D005210 5.4e-118 427.9 247 79.8
Oeu014856.1 Olea europaea HOM05D004328 ORTHO05D005210 5.4e-118 427.9 243 78.2
PSO782G5014 Papaver somniferum HOM05D004328 ORTHO05D005210 5.4e-118 427.9 247 79.8
Lsat_1_v5_gn_5_129800 Lactuca sativa HOM05D004328 ORTHO05D005210 1.6e-117 426.4 243 79.0
MSTRG.4726 Avicennia marina HOM05D004328 ORTHO05D005210 4.5e-117 424.9 243 76.1
CAN.G438.47 Capsicum annuum HOM05D004328 ORTHO05D005210 4.5e-117 424.9 244 78.3
Solyc06g066800.2 Solanum lycopersicum HOM05D004328 ORTHO05D005210 5.9e-117 424.5 234 79.1
Peaxi162Scf00207g00087 Petunia axillaris HOM05D004328 ORTHO05D005210 7.7e-117 424.1 245 75.9
CANSAT21G1275 Cannabis sativa HOM05D004328 ORTHO05D005210 1.0e-116 423.7 231 80.1
Sopen03g039300 Solanum pennellii HOM05D004328 ORTHO05D005210 1.0e-116 423.7 235 80.4
PGSC0003DMG400002634 Solanum tuberosum HOM05D004328 ORTHO05D005210 1.0e-116 423.7 235 80.4
Hund00585 Selenicereus undatus HOM05D004328 ORTHO05D005210 1.3e-116 423.3 253 75.9
SalBow2G0585 Salvia bowleyana HOM05D004328 ORTHO05D005210 3.8e-116 421.8 243 77.8
vmacro16940 Vaccinium macrocarpon HOM05D004328 ORTHO05D005210 3.8e-116 421.8 253 75.1
Ah.01g021090 Amaranthus hybridus HOM05D004738 ORTHO05D006439 6.6e-116 421.0 244 78.3
MSTRG.11095 Avicennia marina HOM05D004328 ORTHO05D005210 6.6e-116 421.0 232 79.3
Lsat_1_v5_gn_4_104460 Lactuca sativa HOM05D004328 ORTHO05D005210 8.6e-116 420.6 244 77.5
HanXRQChr09g0275421 Helianthus annuus HOM05D004328 ORTHO05D005210 1.1e-115 420.2 254 74.8
SalBow2G3647 Salvia bowleyana HOM05D004328 ORTHO05D005210 1.5e-115 419.9 242 77.7
CDE02G2329 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 2.5e-115 419.1 234 79.9
Oeu022420.1 Olea europaea HOM05D004328 ORTHO05D005210 2.5e-115 419.1 237 78.1
ECA232G0498 Erigeron canadensis HOM05D004328 ORTHO05D005210 3.3e-115 418.7 238 77.7
SalBow2G3162 Salvia bowleyana HOM05D004328 ORTHO05D005210 4.2e-115 418.3 240 76.2
PSO384G3958 Papaver somniferum HOM05D004328 ORTHO05D005210 5.5e-115 417.9 251 76.5
DCAR_007553 Daucus carota HOM05D004328 ORTHO05D005210 7.2e-115 417.5 245 76.7
PSO135G0870 Papaver somniferum HOM05D004328 ORTHO05D005210 9.5e-115 417.2 251 75.7
unitig_744.g24340 Utricularia gibba HOM05D004328 ORTHO05D005210 1.6e-114 416.4 236 78.8
Aqoxy7G02544 Aquilegia oxysepala HOM05D004328 ORTHO05D005210 3.6e-114 415.2 231 80.5
PSO384G1513 Papaver somniferum HOM05D004328 ORTHO05D005210 3.6e-114 415.2 249 74.7
HanXRQChr14g0455981 Helianthus annuus HOM05D004328 ORTHO05D005210 4.7e-114 414.8 248 74.6
MBI04_g30767_MAGBIO Magnolia biondii HOM05D004328 ORTHO05D005210 6.1e-114 414.5 250 75.2
unitig_21.g20512 Utricularia gibba HOM05D004328 ORTHO05D005210 8.0e-114 414.1 242 76.9
CDE06G0667 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 2.3e-113 412.5 232 79.7
SHI15002 Sapria himalayana HOM05D004328 ORTHO05D005210 4.0e-113 411.8 240 77.1
Aqoxy3G03943 Aquilegia oxysepala HOM05D004328 ORTHO05D005210 2.0e-112 409.5 228 79.8
PSO675G2272 Papaver somniferum HOM05D004328 ORTHO05D005210 2.0e-112 409.5 238 77.3
Migut.I00840 Erythranthe guttata HOM05D004328 ORTHO05D005210 4.4e-112 408.3 233 75.5
ATR0829G052 Amborella trichopoda HOM05D004328 ORTHO05D005210 1.1e-110 403.7 228 78.5
ECA234G3285 Erigeron canadensis HOM05D004328 ORTHO05D005210 1.1e-110 403.7 248 73.0
PSO502G0015 Papaver somniferum HOM05D004328 ORTHO05D005210 2.4e-110 402.5 238 76.5
AUR62016419 Chenopodium quinoa HOM05D004328 ORTHO05D005210 4.6e-109 398.3 221 81.9
Cpa.g.sc43.145 Carica papaya HOM05D004328 ORTHO05D005210 7.3e-107 391.0 218 82.6
SEGI_10122 Sequoiadendron giganteum HOM05D004328 ORTHO05D005210 7.3e-107 391.0 238 73.1
SEGI_26076 Sequoiadendron giganteum HOM05D004328 ORTHO05D005210 4.7e-106 388.3 248 70.2
HPP92_014971 Vanilla planifolia HOM05D004328 ORTHO05D005210 1.2e-104 383.6 230 73.9
unitig_578.g16690 Utricularia gibba HOM05D004328 ORTHO05D005210 2.2e-103 379.4 241 71.4
Os07g0413800 Oryza sativa ssp. japonica HOM05D004328 ORTHO05D005210 1.2e-96 357.1 241 66.4
CBR_g51102 Chara braunii HOM05D004328 ORTHO05D005210 8.3e-95 350.9 226 68.6
SMO118G0121 Selaginella moellendorffii HOM05D004328 ORTHO05D005210 5.4e-94 348.2 223 69.5
Os10g0516400 Oryza sativa ssp. japonica HOM05D004328 ORTHO05D005210 2.1e-93 346.3 252 61.9
MD07G1085100 Malus domestica HOM05D004328 ORTHO05D005210 3.5e-93 345.5 258 65.1
Zm00001eb192470 Zea mays HOM05D004328 ORTHO05D005210 3.5e-93 345.5 231 67.1
AagrBONN_evm.TU.Sc2ySwM_362.571 Anthoceros agrestis HOM05D004328 ORTHO05D005210 4.3e-91 338.6 235 63.0
Zm00001eb062050 Zea mays HOM05D004328 ORTHO05D005210 8.9e-89 330.9 243 62.1
Hma1.2p1_0323F.1_g125290 Hydrangea macrophylla HOM05D004328 ORTHO05D005210 1.7e-84 316.6 256 60.9
GSVIVG01024323001 Vitis vinifera HOM05D004328 ORTHO05D005210 6.2e-82 308.1 164 84.8
Cc04_g03630 Coffea canephora HOM05D004328 ORTHO05D005210 9.9e-80 300.8 159 83.0
Solyc03g120410.3 Solanum lycopersicum HOM05D004328 ORTHO05D005210 5.1e-76 288.5 158 80.4
Pp3c20_18260 Physcomitrium patens HOM05D004328 ORTHO05D005210 1.9e-62 243.4 190 57.9
Haze_27513 Corylus avellana HOM05D004328 ORTHO05D005210 3.8e-55 219.2 218 49.1
CDE06G1981 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 7.1e-54 214.9 232 49.1
CSS0035944 Camellia sinensis var. sinensis HOM05D004328 ORTHO05D005210 1.9e-46 190.3 212 49.5
GSVIVG01017160001 Vitis vinifera HOM05D004328 ORTHO05D005210 5.9e-40 168.7 96 79.2
HanXRQChr16g0528931 Helianthus annuus HOM05D004328 ORTHO05D005210 2.9e-31 139.8 107 62.6
CANSAT56G0697 Cannabis sativa HOM05D004328 ORTHO05D005210 2.1e-29 133.7 116 56.9
Actinidia15822 Actinidia chinensis HOM05D004328 ORTHO05D005210 4.1e-25 119.4 141 46.8
Zm00001eb029120 Zea mays HOM05D004328 ORTHO05D442189 1.2e-13 81.3 64 57.8
Sc12g0009110 Simmondsia chinensis HOM05D004328 ORTHO05D387867 3.0e-12 76.6 51 56.9


User provided reference genes

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