Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p020075 Quercus lobata HOM05D005122 ORTHO05D006057 1.1e-68 263.1 127 100.0
QL10p007329 Quercus lobata HOM05D005122 ORTHO05D006057 1.1e-68 263.1 127 100.0
QL05p032556 Quercus lobata HOM05D005122 ORTHO05D006057 9.5e-68 260.0 127 99.2
QL05p042765 Quercus lobata HOM05D005122 ORTHO05D006057 2.7e-54 215.3 107 95.3
QL09p010018 Quercus lobata HOM05D005122 ORTHO05D006057 8.7e-45 183.7 104 87.5
QL11p002844 Quercus lobata HOM05D005122 ORTHO05D006057 2.9e-40 168.7 95 84.2
QL02p053078 Quercus lobata HOM05D005122 ORTHO05D006057 2.4e-39 165.6 90 88.9
Duzib168G0854 Durio zibethinus HOM05D005122 ORTHO05D006057 5.1e-37 157.9 95 78.9
Cfa002940 Carpinus fangiana HOM05D005122 ORTHO05D006057 8.7e-37 157.1 95 80.0
Gohir.D05G037400 Gossypium hirsutum HOM05D005122 ORTHO05D006057 8.7e-37 157.1 95 77.9
Gorai.009G037900 Gossypium raimondii HOM05D005122 ORTHO05D006057 8.7e-37 157.1 95 77.9
Rhsim03G0225900 Rhododendron simsii HOM05D005122 ORTHO05D006057 1.1e-36 156.8 95 76.8
Thecc.09G070600 Theobroma cacao HOM05D005122 ORTHO05D006057 1.1e-36 156.8 95 78.9
QL10p017739 Quercus lobata HOM05D005122 ORTHO05D006057 2.5e-36 155.6 95 77.9
Haze_26065 Corylus avellana HOM05D005122 ORTHO05D006057 3.3e-36 155.2 95 78.9
Cc06_g12660 Coffea canephora HOM05D005122 ORTHO05D006057 4.3e-36 154.8 95 75.8
Gohir.A05G035900 Gossypium hirsutum HOM05D005122 ORTHO05D006057 4.3e-36 154.8 95 75.8
Atru.chr7.1762 Acer truncatum HOM05D005122 ORTHO05D006057 7.4e-36 154.1 95 76.8
MD02G1100300 Malus domestica HOM05D005122 ORTHO05D006057 7.4e-36 154.1 95 78.9
MBI19_g37996_MAGBIO Magnolia biondii HOM05D005122 ORTHO05D006057 1.3e-35 153.3 95 74.7
vmacro06355 Vaccinium macrocarpon HOM05D005122 ORTHO05D006057 1.6e-35 152.9 95 74.7
DCAR_028528 Daucus carota HOM05D005122 ORTHO05D006057 2.8e-35 152.1 95 73.7
Potri.006G136900 Populus trichocarpa HOM05D005122 ORTHO05D006057 3.7e-35 151.8 95 75.8
Sabra06G0107000 Salix brachista HOM05D005122 ORTHO05D006057 3.7e-35 151.8 95 75.8
Aqoxy7G00978 Aquilegia oxysepala HOM05D005122 ORTHO05D006057 4.8e-35 151.4 95 72.6
CAN.G210.4 Capsicum annuum HOM05D005122 ORTHO05D006057 6.2e-35 151.0 95 72.6
Ciclev10007237m.g Citrus clementina HOM05D005122 ORTHO05D006057 6.2e-35 151.0 95 74.7
COL.COLO4_21211 Corchorus olitorius HOM05D005122 ORTHO05D006057 1.1e-34 150.2 95 71.6
Zm00001eb313890 Zea mays HOM05D005122 ORTHO05D006057 1.1e-34 150.2 101 66.3
Dinv42429 Davidia involucrata HOM05D005122 ORTHO05D006057 1.4e-34 149.8 95 73.7
PGR142G3115 Punica granatum HOM05D005122 ORTHO05D006057 1.4e-34 149.8 95 73.7
TWI34G1091 Tripterygium wilfordii HOM05D005122 ORTHO05D006057 1.4e-34 149.8 95 73.7
MD15G1223200 Malus domestica HOM05D005122 ORTHO05D006057 1.8e-34 149.4 95 75.8
Rhsim05G0002500 Rhododendron simsii HOM05D005122 ORTHO05D006057 1.8e-34 149.4 95 74.7
Prupe.7G192500 Prunus persica HOM05D005122 ORTHO05D006057 2.4e-34 149.1 95 75.8
GSVIVG01015020001 Vitis vinifera HOM05D005122 ORTHO05D006057 5.3e-34 147.9 95 72.6
Cpa.g.sc577.1 Carica papaya HOM05D005122 ORTHO05D006057 6.9e-34 147.5 95 71.6
CsaV3_5G027680 Cucumis sativus L. HOM05D005122 ORTHO05D006057 9.0e-34 147.1 95 72.6
Psat4g019280 Pisum sativum HOM05D005122 ORTHO05D006057 9.0e-34 147.1 95 70.5
MELO3C022901.2 Cucumis melo HOM05D005122 ORTHO05D006057 1.2e-33 146.7 95 71.6
CSS0025527 Camellia sinensis var. sinensis HOM05D005122 ORTHO05D006057 1.5e-33 146.4 95 74.7
Medtr4g124670 Medicago truncatula HOM05D005122 ORTHO05D006057 1.5e-33 146.4 95 71.6
Ca_21337_v3 Cicer arietinum L. HOM05D005122 ORTHO05D006057 2.0e-33 146.0 95 70.5
Ca_30968_v3 Cicer arietinum L. HOM05D005122 ORTHO05D006057 2.0e-33 146.0 95 70.5
Sopen07g022170 Solanum pennellii HOM05D005122 ORTHO05D006057 2.6e-33 145.6 94 71.3
THA.LOC104811288 Tarenaya hassleriana HOM05D005122 ORTHO05D006057 2.6e-33 145.6 95 69.5
TPR.G12583 Trifolium pratense HOM05D005122 ORTHO05D006057 2.6e-33 145.6 104 67.3
Phvul.003G127600 Phaseolus vulgaris HOM05D005122 ORTHO05D006057 4.5e-33 144.8 95 69.5
Manes.16G092800 Manihot esculenta HOM05D005122 ORTHO05D006057 9.9e-33 143.7 95 72.6
Peaxi162Scf00191g00046 Petunia axillaris HOM05D005122 ORTHO05D006057 1.3e-32 143.3 95 69.5
Solyc07g042500.4 Solanum lycopersicum HOM05D005122 ORTHO05D006057 1.3e-32 143.3 94 69.1
Lalb_Chr13g0299211 Lupinus albus HOM05D005122 ORTHO05D006057 1.7e-32 142.9 95 70.5
Nitab4.5_0007169g0020 Nicotiana tabacum HOM05D005122 ORTHO05D006057 2.2e-32 142.5 95 69.5
ClCG11G000010 Citrullus lanatus HOM05D005122 ORTHO05D006057 2.9e-32 142.1 100 67.0
Glyma.17G045900 Glycine max HOM05D005122 ORTHO05D006057 2.9e-32 142.1 95 69.5
Nn8g38537 Nelumbo nucifera HOM05D005122 ORTHO05D006057 2.9e-32 142.1 95 71.6
Hund26106 Selenicereus undatus HOM05D005122 ORTHO05D006057 2.9e-32 142.1 95 69.5
VMungo1215G1386 Vigna mungo HOM05D005122 ORTHO05D006057 3.8e-32 141.7 95 68.4
arahy.Tifrunner.gnm1.ann1.EYQ1XG Arachis hypogaea HOM05D005122 ORTHO05D006057 4.9e-32 141.4 95 69.5
Lj4g0009327 Lotus japonicus HOM05D005122 ORTHO05D006057 4.9e-32 141.4 95 67.4
Aa31LG4G13020 Aethionema arabicum HOM05D005122 ORTHO05D006057 1.1e-31 140.2 95 65.3
CANSAT56G2058 Cannabis sativa HOM05D005122 ORTHO05D006057 1.1e-31 140.2 95 74.7
SalBow6G0425 Salvia bowleyana HOM05D005122 ORTHO05D006057 1.1e-31 140.2 95 70.5
CANSAT56G0085 Cannabis sativa HOM05D005122 ORTHO05D006057 1.4e-31 139.8 95 73.7
Ah.14g084680 Amaranthus hybridus HOM05D005122 ORTHO05D006057 1.9e-31 139.4 95 68.4
arahy.Tifrunner.gnm1.ann1.C788P2 Arachis hypogaea HOM05D005122 ORTHO05D006057 1.9e-31 139.4 95 68.4
MSTRG.19429 Avicennia marina HOM05D005122 ORTHO05D006057 1.9e-31 139.4 95 69.5
Lj4A920G55 Lonicera japonica HOM05D005122 ORTHO05D006057 3.2e-31 138.7 95 69.5
ATR0681G090 Amborella trichopoda HOM05D005122 ORTHO05D006057 7.1e-31 137.5 93 66.7
EL10Ac8g18978 Beta vulgaris HOM05D005122 ORTHO05D006057 7.1e-31 137.5 95 67.4
RcHm_v2.0_Chr2g0095891 Rosa chinensis HOM05D005122 ORTHO05D006057 2.1e-30 136.0 95 68.4
FAN19G2002 Fragaria x ananassa HOM05D005122 ORTHO05D006057 3.5e-30 135.2 95 69.5
FvH4_1g09310 Fragaria vesca HOM05D005122 ORTHO05D006057 4.6e-30 134.8 95 69.5
SGA_v2.0_scaffold31G12693 Striga asiatica HOM05D005122 ORTHO05D006057 6.0e-30 134.4 95 65.3
BcaC04g18854 Brassica carinata HOM05D005122 ORTHO05D006057 1.0e-29 133.7 95 66.3
C09p60330 Brassica napus HOM05D005122 ORTHO05D006057 1.0e-29 133.7 95 66.3
BraA10t44307Z Brassica rapa HOM05D005122 ORTHO05D006057 1.0e-29 133.7 95 66.3
CDE04G2636 Ceratophyllum demersum HOM05D005122 ORTHO05D006057 1.0e-29 133.7 95 66.3
FAN23G0697 Fragaria x ananassa HOM05D005122 ORTHO05D006057 1.3e-29 133.3 93 69.9
BolC9t58866H Brassica oleracea HOM05D005122 ORTHO05D006057 1.8e-29 132.9 95 66.3
HPP92_016227 Vanilla planifolia HOM05D005122 ORTHO05D006057 1.8e-29 132.9 98 61.2
AT2G03140 Arabidopsis thaliana HOM05D005122 ORTHO05D006057 2.3e-29 132.5 95 64.2
Eucgr.C00770 Eucalyptus grandis HOM05D005122 ORTHO05D006057 2.3e-29 132.5 95 64.2
FAN28G0954 Fragaria x ananassa HOM05D005122 ORTHO05D006057 2.3e-29 132.5 95 68.4
Lsat_1_v5_gn_5_139061 Lactuca sativa HOM05D005122 ORTHO05D006057 2.3e-29 132.5 95 65.3
Sc08g0009130 Simmondsia chinensis HOM05D005122 ORTHO05D006057 2.3e-29 132.5 95 65.3
Thhalv10012418m.g Eutrema salsugineum HOM05D005122 ORTHO05D006057 3.0e-29 132.1 95 64.2
A10p22480 Brassica napus HOM05D005122 ORTHO05D006057 6.7e-29 131.0 95 65.3
AUR62028313 Chenopodium quinoa HOM05D005122 ORTHO05D006057 6.7e-29 131.0 95 69.5
PSO104G0049 Papaver somniferum HOM05D005122 ORTHO05D006057 6.7e-29 131.0 95 67.4
PSO421G0465 Papaver somniferum HOM05D005122 ORTHO05D006057 6.7e-29 131.0 95 67.4
AL5G12790 Arabidopsis lyrata HOM05D005122 ORTHO05D006057 1.1e-28 130.2 95 63.2
AUR62025308 Chenopodium quinoa HOM05D005122 ORTHO05D006057 2.5e-28 129.0 95 68.4
Migut.J00884 Erythranthe guttata HOM05D005122 ORTHO05D006057 2.5e-28 129.0 96 66.7
Carub.0005s0197 Capsella rubella HOM05D005122 ORTHO05D006057 3.3e-28 128.6 97 62.9
Sp6g27400 Schrenkiella parvula HOM05D005122 ORTHO05D006057 9.6e-28 127.1 95 61.1
SEGI_07817 Sequoiadendron giganteum HOM05D005122 ORTHO05D006057 6.2e-27 124.4 95 64.2
QL04p062404 Quercus lobata HOM05D005122 ORTHO05D006057 1.1e-26 123.6 62 90.3
unitig_27.g24782 Utricularia gibba HOM05D005122 ORTHO05D006057 5.5e-23 111.3 95 57.9
Nitab4.5_0000170g0030 Nicotiana tabacum HOM05D005122 ORTHO05D006057 1.6e-22 109.8 96 57.3
SMO228G0085 Selaginella moellendorffii HOM05D005122 ORTHO05D006057 6.0e-22 107.8 104 52.9
HanXRQChr10g0319771 Helianthus annuus HOM05D005122 ORTHO05D006057 6.7e-21 104.4 95 52.6
Sed0023749 Sechium edule HOM05D005122 ORTHO05D006057 3.3e-20 102.1 66 72.7
TAR624G1201 Trochodendron aralioides HOM05D005122 ORTHO05D006057 8.2e-19 97.4 66 71.2
ECA234G0156 Erigeron canadensis HOM05D005122 ORTHO05D006057 4.1e-18 95.1 95 49.5
Pp3c18_16020 Physcomitrium patens HOM05D005122 ORTHO05D006057 1.0e-13 80.5 105 41.0
Oeu045002.1 Olea europaea HOM05D005122 ORTHO05D006057 1.3e-11 73.6 56 62.5
AagrBONN_evm.TU.Sc2ySwM_362.1932 Anthoceros agrestis HOM05D005122 ORTHO05D006057 4.1e-10 68.6 102 32.4
Mapoly0027s0173 Marchantia polymorpha HOM05D005122 ORTHO05D006057 6.9e-10 67.8 68 50.0
CBR_g21949 Chara braunii HOM05D001824 ORTHO05D007807 5.0e-08 61.6 73 37.0
HPP92_007398 Vanilla planifolia HOM05D001824 ORTHO05D007807 4.2e-07 58.5 79 34.2
SMO111G0132 Selaginella moellendorffii HOM05D001824 ORTHO05D007807 5.5e-07 58.2 71 35.2
MCO12G402 Micromonas commoda HOM05D001824 ORTHO05D007807 9.4e-07 57.4 66 39.4
Dinv25511 Davidia involucrata HOM05D005122 ORTHO05D006057 2.7e-06 55.8 35 71.4
CBR_g48436 Chara braunii HOM05D000019 ORTHO05D000048 3.6e-06 55.5 73 39.7
Aqoxy5G02576 Aquilegia oxysepala HOM05D001824 ORTHO05D003650 4.7e-06 55.1 104 27.9
Lalb_Chr02g0141871 Lupinus albus HOM05D001824 ORTHO05D003650 4.7e-06 55.1 72 34.7
Lalb_Chr21g0305841 Lupinus albus HOM05D001824 ORTHO05D003650 4.7e-06 55.1 72 33.3
Hund11346 Selenicereus undatus HOM05D001824 ORTHO05D007807 4.7e-06 55.1 79 31.6
Ca_10600_v3 Cicer arietinum L. HOM05D001824 ORTHO05D003650 6.1e-06 54.7 62 40.3
HanXRQChr01g0027181 Helianthus annuus HOM05D001824 ORTHO05D003650 6.1e-06 54.7 89 34.8
Lsat_1_v5_gn_9_120361 Lactuca sativa HOM05D001824 ORTHO05D003650 6.1e-06 54.7 79 32.9
BcaC07g39541 Brassica carinata HOM05D001824 ORTHO05D007807 7.9e-06 54.3 79 35.4
C08p25940 Brassica napus HOM05D001824 ORTHO05D007807 7.9e-06 54.3 79 35.4
BolC8t50210H Brassica oleracea HOM05D001824 ORTHO05D007807 7.9e-06 54.3 79 35.4
Glyma.10G214900 Glycine max HOM05D001824 ORTHO05D003650 7.9e-06 54.3 72 33.3
Glyma.20G176900 Glycine max HOM05D001824 ORTHO05D003650 7.9e-06 54.3 72 33.3
SMO116G0203 Selaginella moellendorffii HOM05D001824 ORTHO05D003650 7.9e-06 54.3 100 32.0


User provided reference genes

Program Settings