Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p019622 Quercus lobata HOM05D008678 ORTHO05D010561 1.2e-129 466.5 231 100.0
Haze_19041 Corylus avellana HOM05D008678 ORTHO05D010561 8.7e-35 151.4 227 46.7
Cfa008178 Carpinus fangiana HOM05D008678 ORTHO05D010561 2.5e-34 149.8 224 48.7
CiPaw.03G094000 Carya illinoinensis HOM05D008678 ORTHO05D010561 4.3e-34 149.1 239 47.3
Haze_13871 Corylus avellana HOM05D008678 ORTHO05D010561 5.6e-34 148.7 226 47.3
Cfa020725 Carpinus fangiana HOM05D008678 ORTHO05D010561 7.3e-34 148.3 227 46.3
Thecc.03G156400 Theobroma cacao HOM05D008678 ORTHO05D010561 3.5e-20 102.8 235 35.7
Glyma.12G005500 Glycine max HOM05D008678 ORTHO05D010561 1.5e-18 97.4 270 29.6
COL.COLO4_14128 Corchorus olitorius HOM05D008678 ORTHO05D010561 2.4e-16 90.1 225 33.3
Dinv22950 Davidia involucrata HOM05D005186 ORTHO05D006278 4.0e-16 89.4 183 41.0
Aqoxy5G00775 Aquilegia oxysepala HOM05D008678 ORTHO05D010561 4.5e-15 85.9 147 40.8
VMungo1127G0666 Vigna mungo HOM05D016164 ORTHO05D010561 1.0e-14 84.7 253 31.2
Nitab4.5_0001383g0020 Nicotiana tabacum HOM05D008678 ORTHO05D010561 2.9e-14 83.2 230 32.6
Ciclev10006531m.g Citrus clementina HOM05D008678 ORTHO05D010561 1.1e-13 81.3 225 33.8
Nitab4.5_0003875g0050 Nicotiana tabacum HOM05D008678 ORTHO05D010561 1.1e-13 81.3 233 33.0
Gohir.A12G198800 Gossypium hirsutum HOM05D008678 ORTHO05D010561 4.2e-13 79.3 250 32.0
Sabra15G0140100 Salix brachista HOM05D008678 ORTHO05D010561 1.2e-12 77.8 250 29.6
Actinidia25006 Actinidia chinensis HOM05D008678 ORTHO05D010561 1.6e-12 77.4 229 36.2
Gohir.D12G201500 Gossypium hirsutum HOM05D008678 ORTHO05D010561 3.5e-12 76.3 245 32.2
Hma1.2p1_1640F.1_g295075 Hydrangea macrophylla HOM05D008678 ORTHO05D010561 6.0e-12 75.5 150 40.7
Hma1.2p1_1640F.1_g295090 Hydrangea macrophylla HOM05D008678 ORTHO05D010561 6.0e-12 75.5 150 40.7
TPR.G137 Trifolium pratense HOM05D016164 ORTHO05D010561 6.0e-12 75.5 257 29.6
Gorai.008G216600 Gossypium raimondii HOM05D008678 ORTHO05D010561 7.9e-12 75.1 245 31.8
Nn6g34019 Nelumbo nucifera HOM05D008678 ORTHO05D010561 7.9e-12 75.1 227 32.2
Manes.14G035600 Manihot esculenta HOM05D008678 ORTHO05D010561 2.3e-11 73.6 216 32.4
Oeu037645.1 Olea europaea HOM05D008678 ORTHO05D010561 6.7e-11 72.0 123 39.0
Psat7g193840 Pisum sativum HOM05D016164 ORTHO05D010561 6.7e-11 72.0 219 30.1
vmacro06794 Vaccinium macrocarpon HOM05D008678 ORTHO05D010561 1.5e-10 70.9 232 33.6
Oeu015316.1 Olea europaea HOM05D008678 ORTHO05D010561 1.9e-10 70.5 231 30.3
Cc02_g04210 Coffea canephora HOM05D008678 ORTHO05D010561 1.3e-09 67.8 235 30.6
Glyma.09G231050 Glycine max HOM05D008678 ORTHO05D010561 3.7e-09 66.2 84 38.1
PGSC0003DMG400013859 Solanum tuberosum HOM05D008678 ORTHO05D010561 1.1e-08 64.7 226 30.5
arahy.Tifrunner.gnm1.ann1.BE0B4V Arachis hypogaea HOM05D008678 ORTHO05D010561 3.1e-08 63.2 237 30.4
RhsimUnG0046600 Rhododendron simsii HOM05D008678 ORTHO05D010561 3.1e-08 63.2 241 31.1
Nn1g01065 Nelumbo nucifera HOM05D008678 ORTHO05D010561 6.9e-08 62.0 112 37.5
Sed0024942 Sechium edule HOM05D008678 ORTHO05D010561 2.6e-07 60.1 227 31.7
Lj3g0007730 Lotus japonicus HOM05D016164 ORTHO05D010561 3.4e-07 59.7 259 28.6
Solyc03g083980.1 Solanum lycopersicum HOM05D008678 ORTHO05D010561 1.0e-06 58.2 138 36.2
Prupe.2G277600 Prunus persica HOM05D008678 ORTHO05D010561 1.3e-06 57.8 147 34.7
Phvul.011G006300 Phaseolus vulgaris HOM05D016164 ORTHO05D010561 1.7e-06 57.4 240 30.4
Potri.015G126700 Populus trichocarpa HOM05D008678 ORTHO05D010561 3.8e-06 56.2 224 28.1


User provided reference genes

Program Settings