Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p017632 Quercus lobata HOM05D008012 ORTHO05D010154 5.5e-102 374.4 201 100.0
CiPaw.07G166200 Carya illinoinensis HOM05D008012 ORTHO05D010154 6.2e-37 158.3 295 38.6
Atru.chr13.1021 Acer truncatum HOM05D008012 ORTHO05D010154 1.5e-35 153.7 214 48.1
Lalb_Chr11g0065041 Lupinus albus HOM05D008012 ORTHO05D010154 2.0e-35 153.3 197 46.2
Cfa013683 Carpinus fangiana HOM05D008012 ORTHO05D010154 2.2e-34 149.8 153 56.2
Lalb_Chr23g0270051 Lupinus albus HOM05D008012 ORTHO05D010154 1.3e-31 140.6 182 45.6
Ciclev10002397m.g Citrus clementina HOM05D008012 ORTHO05D010154 6.6e-31 138.3 214 42.5
Manes.18G059880 Manihot esculenta HOM05D008012 ORTHO05D010154 1.1e-30 137.5 213 40.8
RcHm_v2.0_Chr7g0236831 Rosa chinensis HOM05D008012 ORTHO05D010154 2.5e-30 136.3 200 45.0
Lj1g0025426 Lotus japonicus HOM05D008012 ORTHO05D010154 5.6e-30 135.2 197 44.7
Glyma.04G091500 Glycine max HOM05D008012 ORTHO05D010154 7.3e-30 134.8 195 40.5
Prupe.1G530900 Prunus persica HOM05D008012 ORTHO05D010154 7.3e-30 134.8 135 54.1
Cpa.g.sc21.9 Carica papaya HOM05D008012 ORTHO05D010154 9.5e-30 134.4 217 42.4
Phvul.009G144400 Phaseolus vulgaris HOM05D008012 ORTHO05D010154 1.1e-28 131.0 196 42.3
CANSAT25G2577 Cannabis sativa HOM05D008012 ORTHO05D010154 6.8e-28 128.3 235 42.6
Aqoxy5G01307 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 1.5e-27 127.1 204 40.2
Glyma.06G093300 Glycine max HOM05D008012 ORTHO05D010154 1.5e-27 127.1 195 41.5
Dinv44854 Davidia involucrata HOM05D008012 ORTHO05D010154 2.0e-27 126.7 283 35.0
Hma1.2p1_0125F.1_g058940 Hydrangea macrophylla HOM05D008012 ORTHO05D010154 7.6e-27 124.8 279 37.3
Dinv42620 Davidia involucrata HOM05D008012 ORTHO05D010154 6.4e-26 121.7 195 41.0
MBI02_g32605_MAGBIO Magnolia biondii HOM05D008012 ORTHO05D010154 1.4e-25 120.6 264 36.7
TPR.G26063 Trifolium pratense HOM05D008012 ORTHO05D010154 1.4e-25 120.6 190 43.7
Psat5g046360 Pisum sativum HOM05D008012 ORTHO05D010154 2.4e-25 119.8 185 45.4
COL.COLO4_35233 Corchorus olitorius HOM05D008012 ORTHO05D010154 5.4e-25 118.6 243 35.0
Medtr3g100460 Medicago truncatula HOM05D008012 ORTHO05D010154 2.1e-24 116.7 197 42.1
TAR628G1418 Trochodendron aralioides HOM05D008012 ORTHO05D010154 2.1e-24 116.7 192 41.7
GSVIVG01009167001 Vitis vinifera HOM05D008012 ORTHO05D010154 2.7e-24 116.3 140 50.7
FAN04G0544 Fragaria x ananassa HOM05D008012 ORTHO05D010154 7.8e-24 114.8 176 43.2
Duzib093G0747 Durio zibethinus HOM05D008012 ORTHO05D010154 1.0e-23 114.4 145 46.9
Ca_15998_v3 Cicer arietinum L. HOM05D008012 ORTHO05D010154 1.7e-23 113.6 189 39.7
vmacro21334 Vaccinium macrocarpon HOM05D008012 ORTHO05D010154 3.9e-23 112.5 204 38.2
FAN18G1410 Fragaria x ananassa HOM05D008012 ORTHO05D010154 8.7e-23 111.3 194 39.7
FvH4_5g35450 Fragaria vesca HOM05D008012 ORTHO05D010154 1.1e-22 110.9 194 40.2
FAN08G2109 Fragaria x ananassa HOM05D008012 ORTHO05D010154 1.1e-22 110.9 194 40.2
ECA232G0711 Erigeron canadensis HOM05D008012 ORTHO05D010154 1.5e-22 110.5 196 39.3
Hund16860 Selenicereus undatus HOM05D008012 ORTHO05D010154 3.3e-22 109.4 193 42.0
AUR62019041 Chenopodium quinoa HOM05D008012 ORTHO05D010154 4.3e-22 109.0 191 38.2
Gohir.D05G222500 Gossypium hirsutum HOM05D008012 ORTHO05D010154 7.3e-22 108.2 263 34.2
CSS0008352 Camellia sinensis var. sinensis HOM05D008012 ORTHO05D010154 9.6e-22 107.8 120 50.8
Gorai.009G229900 Gossypium raimondii HOM05D008012 ORTHO05D010154 9.6e-22 107.8 263 34.2
Gohir.A05G219900 Gossypium hirsutum HOM05D008012 ORTHO05D010154 6.2e-21 105.1 263 32.7
Thecc.08G070000 Theobroma cacao HOM05D008012 ORTHO05D010154 6.2e-21 105.1 85 57.6
EL10Ac1g01062 Beta vulgaris HOM05D008012 ORTHO05D010154 1.1e-20 104.4 204 36.8
Lsat_1_v5_gn_9_75360 Lactuca sativa HOM05D008012 ORTHO05D010154 1.1e-20 104.4 193 39.4
Rhsim06G0072100 Rhododendron simsii HOM05D008012 ORTHO05D010154 5.3e-20 102.1 131 45.8
CDE04G1170 Ceratophyllum demersum HOM05D008012 ORTHO05D010154 9.9e-19 97.8 196 37.2
arahy.Tifrunner.gnm1.ann1.S7389H Arachis hypogaea HOM05D008012 ORTHO05D010154 2.2e-18 96.7 143 45.5
Eucgr.F02139 Eucalyptus grandis HOM05D008012 ORTHO05D010154 1.4e-17 94.0 152 38.8
Sc23g0000670 Simmondsia chinensis HOM05D008012 ORTHO05D010154 1.4e-17 94.0 144 40.3
PGR031G3518 Punica granatum HOM05D052328 ORTHO05D010154 1.9e-17 93.6 147 40.1
Nn5g29899 Nelumbo nucifera HOM05D008012 ORTHO05D010154 2.4e-17 93.2 260 30.4
TWI56G1079 Tripterygium wilfordii HOM05D008012 ORTHO05D010154 2.4e-17 93.2 128 44.5
ATR0665G245 Amborella trichopoda HOM05D008012 ORTHO05D010154 7.1e-17 91.7 182 36.8
HanXRQChr12g0378051 Helianthus annuus HOM05D008012 ORTHO05D010154 9.3e-17 91.3 150 42.0
VMungo1309G2208 Vigna mungo HOM05D008012 ORTHO05D010154 9.3e-17 91.3 110 45.5
Zm00001eb038310 Zea mays HOM05D008012 ORTHO05D010154 9.3e-17 91.3 93 47.3
Aqoxy6G01439 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 1.0e-15 87.8 120 40.8
Potri.005G156500 Populus trichocarpa HOM05D008012 ORTHO05D010154 2.5e-14 83.2 97 44.3
HanXRQChr12g0378041 Helianthus annuus HOM05D008012 ORTHO05D010154 5.6e-14 82.0 148 42.6
Os08g0477800 Oryza sativa ssp. japonica HOM05D008012 ORTHO05D010154 6.2e-13 78.6 132 37.1
CAN.G1215.11 Capsicum annuum HOM05D008012 ORTHO05D010154 8.1e-13 78.2 129 37.2
Sabra05G0120100 Salix brachista HOM05D008012 ORTHO05D010154 4.0e-12 75.9 94 41.5
Lj1g0021041 Lotus japonicus HOM05D008196 ORTHO05D010261 1.5e-11 73.9 173 31.2
PSO017G0519 Papaver somniferum HOM05D008012 ORTHO05D010154 4.5e-11 72.4 123 35.8
Actinidia10381 Actinidia chinensis HOM05D000160 ORTHO05D001344 1.9e-09 67.0 69 46.4
HPP92_005977 Vanilla planifolia HOM05D061362 ORTHO05D010154 4.2e-09 65.9 84 36.9
CSS0015058 Camellia sinensis var. sinensis HOM05D008012 ORTHO05D010154 7.1e-09 65.1 72 47.2
SEGI_09514 Sequoiadendron giganteum HOM05D008012 ORTHO05D010154 7.1e-09 65.1 119 34.5
Pp3c1_4500 Physcomitrium patens HOM05D008196 ORTHO05D010261 9.3e-09 64.7 180 26.7
arahy.Tifrunner.gnm1.ann1.XWH5X4 Arachis hypogaea HOM05D008012 ORTHO05D010154 2.1e-08 63.5 131 38.9
Glyma.19G186800 Glycine max HOM05D008196 ORTHO05D010261 2.7e-08 63.2 175 30.9
Phvul.001G181700 Phaseolus vulgaris HOM05D008196 ORTHO05D010261 2.7e-08 63.2 188 27.7
arahy.Tifrunner.gnm1.ann1.A0NJYH Arachis hypogaea HOM05D008196 ORTHO05D010261 6.0e-08 62.0 206 26.2
AagrBONN_evm.TU.Sc2ySwM_344.3461 Anthoceros agrestis HOM05D008196 ORTHO05D010261 1.0e-07 61.2 200 26.0
Pp3c2_36970 Physcomitrium patens HOM05D008196 ORTHO05D010261 1.0e-07 61.2 199 26.1
Pp3c2_36980 Physcomitrium patens HOM05D008196 ORTHO05D010261 1.0e-07 61.2 199 26.1
Atru.chr8.1725_Atru.chr8.1735 Acer truncatum HOM05D008196 ORTHO05D010261 1.8e-07 60.5 185 27.6
VMungo1383G2144 Vigna mungo HOM05D008196 ORTHO05D010261 1.8e-07 60.5 187 28.9
SMO367G1035 Selaginella moellendorffii HOM05D008196 ORTHO05D010261 3.0e-07 59.7 171 27.5
Nn6g35204 Nelumbo nucifera HOM05D008196 ORTHO05D010261 5.1e-07 58.9 169 27.2
Cfa016460 Carpinus fangiana HOM05D008196 ORTHO05D010261 8.7e-07 58.2 188 27.1
Glyma.03G186700 Glycine max HOM05D008196 ORTHO05D010261 8.7e-07 58.2 185 25.9
MD08G1196600 Malus domestica HOM05D008012 ORTHO05D010154 5.6e-06 55.5 146 35.6
Sopen07g015000 Solanum pennellii HOM05D000002 ORTHO05D000001 7.4e-06 55.1 51 52.9
arahy.Tifrunner.gnm1.ann1.PXX6WP Arachis hypogaea HOM05D008196 ORTHO05D010261 9.6e-06 54.7 220 25.5


User provided reference genes

Program Settings