Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p017487 Quercus lobata HOM05D001657 ORTHO05D001557 1.7e-57 226.1 140 100.0
QL09p017412 Quercus lobata HOM05D001657 ORTHO05D001557 5.1e-30 134.8 167 66.5
QL09p017346 Quercus lobata HOM05D001657 ORTHO05D001557 3.4e-26 122.1 167 63.5
Potri.002G104300 Populus trichocarpa HOM05D001657 ORTHO05D001557 1.1e-11 73.9 55 72.7
TWI12G0338 Tripterygium wilfordii HOM05D001657 ORTHO05D001557 1.4e-11 73.6 51 78.4
GSVIVG01009151001 Vitis vinifera HOM05D001657 ORTHO05D001557 9.0e-11 70.9 50 74.0
Cc10_g15720 Coffea canephora HOM05D001657 ORTHO05D001557 1.2e-10 70.5 93 49.5
Duzib041G0188 Durio zibethinus HOM05D001657 ORTHO05D001557 2.0e-10 69.7 56 66.1
Eucgr.F02135 Eucalyptus grandis HOM05D001657 ORTHO05D001557 2.6e-10 69.3 53 71.7
TAR381G1586 Trochodendron aralioides HOM05D001657 ORTHO05D001557 2.6e-10 69.3 53 67.9
Sabra02G0081800 Salix brachista HOM05D001657 ORTHO05D001557 4.5e-10 68.6 51 74.5
CANSAT25G2610 Cannabis sativa HOM05D001657 ORTHO05D001557 5.9e-10 68.2 88 52.3
AL7G28620 Arabidopsis lyrata HOM05D001657 ORTHO05D001557 1.3e-09 67.0 50 70.0
AT4G24580 Arabidopsis thaliana HOM05D001657 ORTHO05D001557 1.3e-09 67.0 50 70.0
AUR62019026 Chenopodium quinoa HOM05D001657 ORTHO05D001557 1.7e-09 66.6 57 64.9
Peaxi162Scf00281g00113 Petunia axillaris HOM05D001657 ORTHO05D001557 1.7e-09 66.6 90 48.9
Duzib093G1654 Durio zibethinus HOM05D001657 ORTHO05D001557 3.8e-09 65.5 56 62.5
Thecc.08G068900 Theobroma cacao HOM05D001657 ORTHO05D001557 3.8e-09 65.5 57 63.2
Carub.0007s1649 Capsella rubella HOM05D001657 ORTHO05D001557 5.0e-09 65.1 46 73.9
CSS0021509 Camellia sinensis var. sinensis HOM05D001657 ORTHO05D001557 1.1e-08 63.9 48 66.7
CARHR231980 Cardamine hirsuta HOM05D001657 ORTHO05D001557 1.1e-08 63.9 46 71.7
Sopen00g006540 Solanum pennellii HOM05D001657 ORTHO05D001557 1.9e-08 63.2 84 51.2
Sopen04g030030 Solanum pennellii HOM05D001657 ORTHO05D001557 1.9e-08 63.2 84 51.2
AUR62027863 Chenopodium quinoa HOM05D001657 ORTHO05D001557 2.5e-08 62.8 55 63.6
ClCG08G011780 Citrullus lanatus HOM05D001657 ORTHO05D001557 3.2e-08 62.4 54 63.0
Sp7g22580 Schrenkiella parvula HOM05D001657 ORTHO05D001557 4.2e-08 62.0 46 71.7
A08p21440 Brassica napus HOM05D001657 ORTHO05D001557 5.5e-08 61.6 46 76.1
BraA08t34093Z Brassica rapa HOM05D001657 ORTHO05D001557 5.5e-08 61.6 46 76.1
Prupe.1G529100 Prunus persica HOM05D001657 ORTHO05D001557 5.5e-08 61.6 97 46.4
THA.LOC104800041 Tarenaya hassleriana HOM05D001657 ORTHO05D001557 5.5e-08 61.6 46 76.1
Atru.chr13.1036 Acer truncatum HOM05D001657 ORTHO05D001557 7.2e-08 61.2 41 75.6
Cfa013693 Carpinus fangiana HOM05D001657 ORTHO05D001557 7.2e-08 61.2 45 71.1
Haze_22334 Corylus avellana HOM05D001657 ORTHO05D001557 7.2e-08 61.2 45 71.1
THA.LOC104799805 Tarenaya hassleriana HOM05D001657 ORTHO05D001557 7.2e-08 61.2 46 73.9
BraA01t01528Z Brassica rapa HOM05D001657 ORTHO05D001557 1.2e-07 60.5 50 68.0
Nitab4.5_0000131g0430 Nicotiana tabacum HOM05D001657 ORTHO05D001557 1.2e-07 60.5 50 66.0
Rhsim07G0210700 Rhododendron simsii HOM05D001657 ORTHO05D001557 1.2e-07 60.5 92 46.7
EL10Ac1g01075 Beta vulgaris HOM05D001657 ORTHO05D001557 1.6e-07 60.1 89 44.9
Thhalv10024336m.g Eutrema salsugineum HOM05D001657 ORTHO05D001557 2.1e-07 59.7 46 67.4
Solyc04g076140.3 Solanum lycopersicum HOM05D001657 ORTHO05D001557 2.1e-07 59.7 84 48.8
BcaC09g50851 Brassica carinata HOM05D001657 ORTHO05D001557 2.7e-07 59.3 60 60.0
A01p15940 Brassica napus HOM05D001657 ORTHO05D001557 2.7e-07 59.3 50 66.0
C01p19910 Brassica napus HOM05D001657 ORTHO05D001557 2.7e-07 59.3 60 60.0
BolC1t01919H Brassica oleracea HOM05D001657 ORTHO05D001557 2.7e-07 59.3 60 60.0
CiPaw.08G054700 Carya illinoinensis HOM05D001657 ORTHO05D001557 2.7e-07 59.3 133 37.6
Ciclev10003194m.g Citrus clementina HOM05D001657 ORTHO05D001557 2.7e-07 59.3 60 60.0
Migut.N02865 Erythranthe guttata HOM05D001657 ORTHO05D001557 3.6e-07 58.9 55 58.2
Nitab4.5_0003300g0050 Nicotiana tabacum HOM05D001657 ORTHO05D001557 4.6e-07 58.5 50 64.0
C07p53700 Brassica napus HOM05D001657 ORTHO05D001557 6.1e-07 58.2 47 70.2
BolC7t45861H Brassica oleracea HOM05D001657 ORTHO05D001557 6.1e-07 58.2 47 70.2
BraA03t14598Z Brassica rapa HOM05D001657 ORTHO05D001557 6.1e-07 58.2 47 70.2
MELO3C030106.2 Cucumis melo HOM05D001657 ORTHO05D001557 6.1e-07 58.2 56 57.1
Sed0017219 Sechium edule HOM05D001657 ORTHO05D001557 6.1e-07 58.2 55 58.2
A03p55400 Brassica napus HOM05D001657 ORTHO05D001557 7.9e-07 57.8 45 73.3
CAN.G1375.1 Capsicum annuum HOM05D001657 ORTHO05D001557 7.9e-07 57.8 53 62.3
SGA_v2.0_scaffold427G51509 Striga asiatica HOM05D001657 ORTHO05D001557 7.9e-07 57.8 50 60.0
SHI23586 Sapria himalayana HOM05D001657 ORTHO05D001557 1.0e-06 57.4 54 55.6
VMungo1309G0475 Vigna mungo HOM05D001657 ORTHO05D001557 1.0e-06 57.4 52 63.5
PSO170G3375 Papaver somniferum HOM05D001657 ORTHO05D001557 1.3e-06 57.0 51 62.7
Manes.18G060400 Manihot esculenta HOM05D001657 ORTHO05D001557 1.8e-06 56.6 103 43.7
Manes.02G146100 Manihot esculenta HOM05D001657 ORTHO05D001557 2.3e-06 56.2 90 44.4
Aa31LG4G9670 Aethionema arabicum HOM05D001657 ORTHO05D001557 3.0e-06 55.8 54 59.3
Phvul.009G143700 Phaseolus vulgaris HOM05D001657 ORTHO05D001557 3.0e-06 55.8 90 43.3
TWI36G0918 Tripterygium wilfordii HOM05D001657 ORTHO05D001557 3.0e-06 55.8 37 75.7
SalBow2G3097 Salvia bowleyana HOM05D001657 ORTHO05D001557 3.9e-06 55.5 62 56.5


User provided reference genes

Program Settings