Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p016421 Quercus lobata HOM05D007473 ORTHO05D009459 7.9e-49 196.8 101 100.0
QL02p034734 Quercus lobata HOM05D007473 ORTHO05D009459 2.3e-48 195.3 101 99.0
Cfa018218 Carpinus fangiana HOM05D007473 ORTHO05D009459 7.1e-42 173.7 101 87.1
Haze_17885 Corylus avellana HOM05D007473 ORTHO05D009459 1.8e-40 169.1 99 84.8
Potri.013G116100 Populus trichocarpa HOM05D007473 ORTHO05D009459 1.2e-36 156.4 101 80.2
Atru.chr13.1869 Acer truncatum HOM05D007473 ORTHO05D009459 7.6e-36 153.7 102 80.4
CiPaw.15G006600 Carya illinoinensis HOM05D007473 ORTHO05D009459 1.0e-35 153.3 101 81.2
GSVIVG01036821001 Vitis vinifera HOM05D007473 ORTHO05D009459 1.3e-35 152.9 99 78.8
Hma1.2p1_0510F.1_g168850 Hydrangea macrophylla HOM05D007473 ORTHO05D009459 5.0e-35 151.0 99 77.8
Thecc.08G199100 Theobroma cacao HOM05D007473 ORTHO05D009459 6.5e-35 150.6 101 80.2
Prupe.8G051200 Prunus persica HOM05D007473 ORTHO05D009459 1.4e-34 149.4 101 78.2
Duzib116G0725 Durio zibethinus HOM05D007473 ORTHO05D009459 1.9e-34 149.1 101 78.2
TWI59G1410 Tripterygium wilfordii HOM05D007473 ORTHO05D009459 3.2e-34 148.3 101 76.2
Gohir.A09G117600 Gossypium hirsutum HOM05D007473 ORTHO05D009459 5.5e-34 147.5 101 76.2
Gohir.D09G114400 Gossypium hirsutum HOM05D007473 ORTHO05D009459 5.5e-34 147.5 101 76.2
Gorai.006G132300 Gossypium raimondii HOM05D007473 ORTHO05D009459 5.5e-34 147.5 101 76.2
Potri.019G086700 Populus trichocarpa HOM05D007473 ORTHO05D009459 7.2e-34 147.1 102 78.4
Sabra19G0097100 Salix brachista HOM05D007473 ORTHO05D009459 1.2e-33 146.4 102 77.5
Sopen11g008770 Solanum pennellii HOM05D007473 ORTHO05D009459 6.1e-33 144.1 101 78.2
Migut.C01206 Erythranthe guttata HOM05D007473 ORTHO05D009459 1.0e-32 143.3 101 77.2
Nitab4.5_0000051g0010 Nicotiana tabacum HOM05D007473 ORTHO05D009459 1.0e-32 143.3 101 77.2
Solyc11g013850.2 Solanum lycopersicum HOM05D007473 ORTHO05D009459 1.3e-32 142.9 99 78.8
Duzib211G0408 Durio zibethinus HOM05D007473 ORTHO05D009459 1.8e-32 142.5 101 74.3
MSTRG.25424 Avicennia marina HOM05D007473 ORTHO05D009459 2.3e-32 142.1 101 77.2
Nitab4.5_0004159g0050 Nicotiana tabacum HOM05D007473 ORTHO05D009459 2.3e-32 142.1 101 76.2
Cpa.g.sc66.113 Carica papaya HOM05D007473 ORTHO05D009459 3.9e-32 141.4 100 77.0
COL.COLO4_36790 Corchorus olitorius HOM05D007473 ORTHO05D009459 5.1e-32 141.0 101 75.2
Aqoxy5G02488 Aquilegia oxysepala HOM05D007473 ORTHO05D009459 1.5e-31 139.4 101 71.3
Manes.02G188900 Manihot esculenta HOM05D007473 ORTHO05D009459 1.9e-31 139.0 99 77.8
PGSC0003DMG400030214 Solanum tuberosum HOM05D007473 ORTHO05D009459 1.9e-31 139.0 101 75.2
Ciclev10003143m.g Citrus clementina HOM05D007473 ORTHO05D009459 2.5e-31 138.7 101 75.2
MD05G1038600 Malus domestica HOM05D007473 ORTHO05D009459 3.3e-31 138.3 101 76.2
ClCG09G010330 Citrullus lanatus HOM05D007473 ORTHO05D009459 7.4e-31 137.1 99 73.7
Ah.05g172820 Amaranthus hybridus HOM05D007473 ORTHO05D009459 1.3e-30 136.3 98 73.5
Sc23g0001050 Simmondsia chinensis HOM05D007473 ORTHO05D009459 1.3e-30 136.3 97 74.2
MELO3C023649.2 Cucumis melo HOM05D007473 ORTHO05D009459 1.6e-30 136.0 99 72.7
MD10G1044400 Malus domestica HOM05D007473 ORTHO05D009459 2.8e-30 135.2 101 74.3
Nn1g08531 Nelumbo nucifera HOM05D007473 ORTHO05D009459 4.8e-30 134.4 101 71.3
Oeu054499.1 Olea europaea HOM05D007473 ORTHO05D009459 4.8e-30 134.4 101 71.3
Phvul.004G085900 Phaseolus vulgaris HOM05D007473 ORTHO05D009459 6.3e-30 134.0 103 71.8
CsaV3_7G024330 Cucumis sativus L. HOM05D007473 ORTHO05D009459 8.2e-30 133.7 99 71.7
AUR62023594 Chenopodium quinoa HOM05D007473 ORTHO05D009459 1.1e-29 133.3 97 71.1
Manes.18G098100 Manihot esculenta HOM05D007473 ORTHO05D009459 1.4e-29 132.9 99 74.7
AUR62004677 Chenopodium quinoa HOM05D000623 ORTHO05D007511 1.8e-29 132.5 97 70.1
Eucgr.F04148 Eucalyptus grandis HOM05D007473 ORTHO05D009459 1.8e-29 132.5 98 75.5
Lalb_Chr19g0129841 Lupinus albus HOM05D007473 ORTHO05D009459 3.1e-29 131.7 102 71.6
Sabra13G0098400 Salix brachista HOM05D007473 ORTHO05D009459 3.1e-29 131.7 96 71.9
TAR628G1168 Trochodendron aralioides HOM05D007473 ORTHO05D009459 3.1e-29 131.7 102 69.6
CANSAT25G2275 Cannabis sativa HOM05D007473 ORTHO05D009459 4.1e-29 131.3 101 68.3
Glyma.02G075700 Glycine max HOM05D007473 ORTHO05D009459 4.1e-29 131.3 103 69.9
SalBow7G0569 Salvia bowleyana HOM05D007473 ORTHO05D009459 5.3e-29 131.0 101 72.3
AT1G71865 Arabidopsis thaliana HOM05D007473 ORTHO05D009459 6.9e-29 130.6 97 70.1
Cc00_g18070 Coffea canephora HOM05D007473 ORTHO05D009459 6.9e-29 130.6 99 70.7
Lalb_Chr01g0009921 Lupinus albus HOM05D007473 ORTHO05D009459 6.9e-29 130.6 102 69.6
Sp5g26890 Schrenkiella parvula HOM05D007473 ORTHO05D009459 6.9e-29 130.6 100 68.0
SpUn0020_0080 Schrenkiella parvula HOM05D007473 ORTHO05D009459 6.9e-29 130.6 100 68.0
AL2G31450 Arabidopsis lyrata HOM05D007473 ORTHO05D009459 9.0e-29 130.2 97 70.1
CSS0009978 Camellia sinensis var. sinensis HOM05D007473 ORTHO05D009459 9.0e-29 130.2 91 75.8
Glyma.16G157600 Glycine max HOM05D007473 ORTHO05D009459 9.0e-29 130.2 103 69.9
Thhalv10019351m.g Eutrema salsugineum HOM05D007473 ORTHO05D009459 3.4e-28 128.3 100 67.0
Sed0021533 Sechium edule HOM05D007473 ORTHO05D009459 4.5e-28 127.9 100 69.0
SGA_v2.0_scaffold25G11079 Striga asiatica HOM05D007473 ORTHO05D009459 5.9e-28 127.5 95 74.7
VMungo0464G1647 Vigna mungo HOM05D007473 ORTHO05D009459 5.9e-28 127.5 104 70.2
Carub.0002s1863 Capsella rubella HOM05D007473 ORTHO05D009459 7.7e-28 127.1 97 68.0
TPR.G30581 Trifolium pratense HOM05D007473 ORTHO05D009459 1.3e-27 126.3 101 71.3
CARHR290890 Cardamine hirsuta HOM05D007473 ORTHO05D009459 1.7e-27 125.9 97 69.1
Lj5g0014701 Lotus japonicus HOM05D007473 ORTHO05D009459 2.2e-27 125.6 103 69.9
Oeu017869.1 Olea europaea HOM05D007473 ORTHO05D009459 6.5e-27 124.0 101 70.3
Peaxi162Scf00476g00621 Petunia axillaris HOM05D007473 ORTHO05D009459 8.5e-27 123.6 92 75.0
BolC6t39645H Brassica oleracea HOM05D007473 ORTHO05D009459 1.4e-26 122.9 100 67.0
BraA07t31366Z Brassica rapa HOM05D007473 ORTHO05D009459 1.4e-26 122.9 100 67.0
EL10Ac3g06462 Beta vulgaris HOM05D007473 ORTHO05D009459 1.9e-26 122.5 95 68.4
BcaC08g46619 Brassica carinata HOM05D007473 ORTHO05D009459 1.9e-26 122.5 100 67.0
A07p38010 Brassica napus HOM05D007473 ORTHO05D009459 1.9e-26 122.5 100 67.0
Aa31LG4G8770 Aethionema arabicum HOM05D007473 ORTHO05D009459 2.5e-26 122.1 96 69.8
Psat6g188360 Pisum sativum HOM05D007473 ORTHO05D009459 2.5e-26 122.1 101 68.3
Medtr1g097080 Medicago truncatula HOM05D007473 ORTHO05D009459 1.2e-25 119.8 101 70.3
ATR0584G170 Amborella trichopoda HOM05D007473 ORTHO05D009459 2.1e-25 119.0 98 63.3
EL10Ac8g20095 Beta vulgaris HOM05D007473 ORTHO05D009459 7.9e-25 117.1 95 66.3
C06p35300 Brassica napus HOM05D007473 ORTHO05D009459 1.0e-24 116.7 103 63.1
PSO017G2761 Papaver somniferum HOM05D007473 ORTHO05D009459 1.0e-24 116.7 101 64.4
BcaC08g45751 Brassica carinata HOM05D007473 ORTHO05D009459 2.3e-24 115.5 100 64.0
BolC6t38636H Brassica oleracea HOM05D007473 ORTHO05D009459 2.3e-24 115.5 100 64.0
A07p30540 Brassica napus HOM05D007473 ORTHO05D009459 8.8e-24 113.6 100 63.0
EL10Ac1g01496 Beta vulgaris HOM05D007473 ORTHO05D009459 2.0e-23 112.5 95 65.3
THA.LOC104800103 Tarenaya hassleriana HOM05D007473 ORTHO05D009459 5.7e-23 110.9 99 68.7
Zm00001eb289250 Zea mays HOM05D007473 ORTHO05D009459 5.7e-23 110.9 100 60.0
BraA07t30689Z Brassica rapa HOM05D007473 ORTHO05D009459 1.7e-22 109.4 100 61.0
Os01g0871350 Oryza sativa ssp. japonica HOM05D007473 ORTHO05D009459 1.7e-22 109.4 99 56.6
Hund27069 Selenicereus undatus HOM05D007473 ORTHO05D009459 8.5e-19 97.1 83 61.4
BcaC08g46617 Brassica carinata HOM05D007473 ORTHO05D009459 5.5e-18 94.4 105 55.2
SEGI_38346 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 9.4e-18 93.6 97 55.7
Aa31LG7G6620 Aethionema arabicum HOM05D007473 ORTHO05D009459 4.7e-17 91.3 81 64.2
EL10Ac8g20080 Beta vulgaris HOM05D007473 ORTHO05D009459 3.9e-16 88.2 91 61.5
Zm00001eb348670 Zea mays HOM05D007473 ORTHO05D009459 8.8e-16 87.0 88 58.0
EL10Ac7g17167 Beta vulgaris HOM05D007473 ORTHO05D009459 1.7e-14 82.8 66 71.2
BcaB03g15623 Brassica carinata HOM05D007473 ORTHO05D009459 3.7e-14 81.6 102 52.0
EL10Ac8g20008 Beta vulgaris HOM05D007473 ORTHO05D009459 2.4e-13 79.0 76 61.8
EL10Ac4g08661 Beta vulgaris HOM05D007473 ORTHO05D009459 5.3e-13 77.8 95 52.6
Hund16811 Selenicereus undatus HOM05D007473 ORTHO05D009459 2.2e-06 55.8 63 54.0
SEGI_05572 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 6.3e-06 54.3 77 42.9


User provided reference genes

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