Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p016276 Quercus lobata HOM05D009119 ORTHO05D003655 2.4e-63 246.1 211 100.0
QL09p016294 Quercus lobata HOM05D009119 ORTHO05D003655 2.5e-52 209.5 121 95.9
Cfa013717 Carpinus fangiana HOM05D009119 ORTHO05D003655 2.0e-25 120.2 125 61.6
Haze_22364 Corylus avellana HOM05D009119 ORTHO05D003655 2.9e-21 106.3 107 61.7
COL.COLO4_11973 Corchorus olitorius HOM05D009119 ORTHO05D003655 6.5e-13 78.6 73 57.5
Thecc.08G065300 Theobroma cacao HOM05D009119 ORTHO05D003655 1.1e-12 77.8 102 51.0
Duzib093G1486 Durio zibethinus HOM05D009119 ORTHO05D003655 2.5e-12 76.6 75 57.3
Potri.005G160500 Populus trichocarpa HOM05D009119 ORTHO05D003655 3.6e-11 72.8 56 71.4
PGR042G3889 Punica granatum HOM05D009119 ORTHO05D003655 2.3e-10 70.1 58 63.8
FAN08G0659 Fragaria x ananassa HOM05D009119 ORTHO05D003655 8.8e-10 68.2 52 75.0
EL10Ac7g17632 Beta vulgaris HOM05D003899 ORTHO05D003655 1.2e-09 67.8 70 45.7
Atru.chr4.839 Acer truncatum HOM05D003899 ORTHO05D003655 1.5e-09 67.4 71 50.7
AUR62017911 Chenopodium quinoa HOM05D003899 ORTHO05D003655 1.5e-09 67.4 69 44.9
Manes.12G153900 Manihot esculenta HOM05D003899 ORTHO05D003655 1.5e-09 67.4 70 52.9
EL10Ac6g15278 Beta vulgaris HOM05D003899 ORTHO05D003655 2.0e-09 67.0 70 45.7
AUR62003600 Chenopodium quinoa HOM05D003899 ORTHO05D003655 5.7e-09 65.5 66 47.0
RcHm_v2.0_Chr7g0237881 Rosa chinensis HOM05D009119 ORTHO05D003655 9.8e-09 64.7 58 70.7
Actinidia06640 Actinidia chinensis HOM05D003899 ORTHO05D003655 1.3e-08 64.3 68 48.5
Cpa.g.sc36.192 Carica papaya HOM05D009119 ORTHO05D003655 2.8e-08 63.2 62 58.1
QL06p029227 Quercus lobata HOM05D003899 ORTHO05D003655 3.7e-08 62.8 68 48.5
CAN.G375.87 Capsicum annuum HOM05D003899 ORTHO05D003655 8.3e-08 61.6 69 47.8
Rhsim07G0207100 Rhododendron simsii HOM05D009119 ORTHO05D003655 1.8e-07 60.5 110 43.6
FAN04G2496 Fragaria x ananassa HOM05D009119 ORTHO05D003655 2.4e-07 60.1 46 78.3
Gohir.A11G224804 Gossypium hirsutum HOM05D003899 ORTHO05D003655 3.1e-07 59.7 66 45.5
CANSAT11G1421 Cannabis sativa HOM05D024004 ORTHO05D003655 4.1e-07 59.3 37 78.4
Dinv24330 Davidia involucrata HOM05D003899 ORTHO05D003655 4.1e-07 59.3 67 46.3
Duzib264G1053 Durio zibethinus HOM05D003899 ORTHO05D003655 4.1e-07 59.3 65 47.7
SGA_v2.0_scaffold32G13006 Striga asiatica HOM05D009119 ORTHO05D003655 4.1e-07 59.3 49 67.3
Thecc.08G144600 Theobroma cacao HOM05D003899 ORTHO05D003655 5.4e-07 58.9 69 46.4
Ciclev10003780m.g Citrus clementina HOM05D003899 ORTHO05D003655 7.0e-07 58.5 67 44.8
Duzib116G0231 Durio zibethinus HOM05D009119 ORTHO05D003655 7.0e-07 58.5 93 47.3
TWI32G0122 Tripterygium wilfordii HOM05D003899 ORTHO05D003655 9.1e-07 58.2 71 45.1
AUR62043709 Chenopodium quinoa HOM05D003899 ORTHO05D003655 1.2e-06 57.8 56 48.2
THA.LOC104827412 Tarenaya hassleriana HOM05D009119 ORTHO05D003655 1.2e-06 57.8 73 57.5
CANSAT11G1058 Cannabis sativa HOM05D024004 ORTHO05D003655 1.6e-06 57.4 36 77.8
FAN18G4281 Fragaria x ananassa HOM05D009119 ORTHO05D003655 1.6e-06 57.4 47 74.5
Nn5g28623 Nelumbo nucifera HOM05D003899 ORTHO05D003655 1.6e-06 57.4 71 47.9
Gohir.A02G066500 Gossypium hirsutum HOM05D003899 ORTHO05D003655 2.0e-06 57.0 69 46.4
Migut.B00438 Erythranthe guttata HOM05D009119 ORTHO05D003655 3.5e-06 56.2 37 81.1
Duzib041G0166 Durio zibethinus HOM05D003899 ORTHO05D003655 5.9e-06 55.5 69 43.5
Haze_17704 Corylus avellana HOM05D003899 ORTHO05D003655 7.7e-06 55.1 71 36.6
FvH4_5g36070 Fragaria vesca HOM05D009119 ORTHO05D003655 7.7e-06 55.1 47 72.3


User provided reference genes

Program Settings