Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p015278 Quercus lobata HOM05D006286 ORTHO05D007741 3.4e-138 495.0 248 100.0
Haze_13788 Corylus avellana HOM05D006286 ORTHO05D007741 3.8e-121 438.3 248 88.7
Cfa008258 Carpinus fangiana HOM05D006286 ORTHO05D007741 1.2e-119 433.3 248 88.3
CiPaw.03G100700 Carya illinoinensis HOM05D006286 ORTHO05D007741 5.3e-115 417.9 248 85.9
FAN10G3629 Fragaria x ananassa HOM05D006286 ORTHO05D007741 4.7e-111 404.8 248 81.9
RcHm_v2.0_Chr1g0376301 Rosa chinensis HOM05D006286 ORTHO05D007741 4.0e-110 401.7 248 81.0
FAN01G0056 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.2e-109 400.2 248 81.5
FvH4_7g28750 Fragaria vesca HOM05D006286 ORTHO05D007741 2.0e-109 399.4 248 80.6
FAN06G1618 Fragaria x ananassa HOM05D006286 ORTHO05D007741 2.6e-109 399.1 248 80.6
Prupe.2G287700 Prunus persica HOM05D006286 ORTHO05D007741 4.8e-108 394.8 248 80.6
FAN06G4550 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.8e-107 392.9 248 79.8
Ciclev10005723m.g Citrus clementina HOM05D006286 ORTHO05D007741 4.1e-107 391.7 241 80.1
FAN03G0937 Fragaria x ananassa HOM05D006286 ORTHO05D007741 9.1e-107 390.6 252 79.0
MD01G1193900 Malus domestica HOM05D006286 ORTHO05D007741 1.2e-106 390.2 250 79.2
FAN03G0223 Fragaria x ananassa HOM05D006286 ORTHO05D007741 3.5e-106 388.7 252 78.6
Thecc.03G167300 Theobroma cacao HOM05D006286 ORTHO05D007741 3.5e-106 388.7 246 78.9
TWI39G0272 Tripterygium wilfordii HOM05D006286 ORTHO05D007741 7.7e-106 387.5 248 81.0
Manes.14G030600 Manihot esculenta HOM05D006286 ORTHO05D007741 1.0e-105 387.1 241 79.7
arahy.Tifrunner.gnm1.ann1.MQ4KH5 Arachis hypogaea HOM05D006286 ORTHO05D007741 6.5e-105 384.4 243 77.0
GSVIVG01018444001 Vitis vinifera HOM05D006286 ORTHO05D007741 1.1e-104 383.6 248 77.8
Sabra15G0147300 Salix brachista HOM05D006286 ORTHO05D007741 9.4e-104 380.6 241 78.0
Atru.chr1.554 Acer truncatum HOM05D006286 ORTHO05D007741 1.2e-103 380.2 248 75.8
Cpa.g.sc4.205 Carica papaya HOM05D006286 ORTHO05D007741 1.2e-103 380.2 240 79.2
CSS0046699 Camellia sinensis var. sinensis HOM05D006286 ORTHO05D007741 4.7e-103 378.3 240 80.0
Potri.015G135300 Populus trichocarpa HOM05D006286 ORTHO05D007741 8.0e-103 377.5 248 76.2
ClCG05G007720 Citrullus lanatus HOM05D006286 ORTHO05D007741 2.3e-102 375.9 248 76.2
Duzib084G1364 Durio zibethinus HOM05D006286 ORTHO05D007741 3.0e-102 375.6 248 77.4
Eucgr.A02845 Eucalyptus grandis HOM05D006286 ORTHO05D007741 3.4e-101 372.1 243 77.0
Rhsim03G0175100 Rhododendron simsii HOM05D006286 ORTHO05D007741 9.8e-101 370.5 245 75.5
CsaV3_3G016660 Cucumis sativus L. HOM05D006286 ORTHO05D007741 4.8e-100 368.2 248 75.0
TAR629G0337 Trochodendron aralioides HOM05D006286 ORTHO05D007741 4.8e-100 368.2 234 78.6
MELO3C006861.2 Cucumis melo HOM05D006286 ORTHO05D007741 1.1e-99 367.1 248 73.8
Lj5g0022226 Lotus japonicus HOM05D006286 ORTHO05D007741 1.8e-99 366.3 245 75.5
Nn1g01303 Nelumbo nucifera HOM05D006286 ORTHO05D007741 5.4e-99 364.8 234 77.4
CANSAT25G1059 Cannabis sativa HOM05D006286 ORTHO05D007741 9.1e-99 364.0 248 74.2
Glyma.10G240400 Glycine max HOM05D006286 ORTHO05D007741 1.2e-98 363.6 244 74.6
HanXRQChr14g0461801 Helianthus annuus HOM05D006286 ORTHO05D007741 1.2e-98 363.6 239 75.7
Gorai.013G064300 Gossypium raimondii HOM05D006286 ORTHO05D007741 4.5e-98 361.7 241 73.9
Gohir.A09G179500 Gossypium hirsutum HOM05D006286 ORTHO05D007741 5.9e-98 361.3 237 75.5
Gohir.D13G056900 Gossypium hirsutum HOM05D006286 ORTHO05D007741 5.9e-98 361.3 241 73.9
Phvul.007G065700 Phaseolus vulgaris HOM05D006286 ORTHO05D007741 5.9e-98 361.3 248 73.4
Lsat_1_v5_gn_2_130220 Lactuca sativa HOM05D006286 ORTHO05D007741 1.3e-97 360.1 243 73.7
Dinv28504 Davidia involucrata HOM05D006286 ORTHO05D007741 3.8e-97 358.6 309 62.8
Lalb_Chr06g0160901 Lupinus albus HOM05D006286 ORTHO05D007741 1.1e-96 357.1 221 78.7
Sed0023063 Sechium edule HOM05D006286 ORTHO05D007741 1.5e-96 356.7 248 73.8
DCAR_018141 Daucus carota HOM05D006286 ORTHO05D007741 1.9e-96 356.3 234 74.8
Gorai.006G196900 Gossypium raimondii HOM05D006286 ORTHO05D007741 1.9e-96 356.3 237 73.8
TPR.G17410 Trifolium pratense HOM05D006286 ORTHO05D007741 3.3e-96 355.5 248 72.6
Cc02_g03560 Coffea canephora HOM05D006286 ORTHO05D007741 5.5e-96 354.8 240 72.1
Rhsim09G0195200 Rhododendron simsii HOM05D006286 ORTHO05D007741 2.8e-95 352.4 239 74.1
Gohir.A13G064700 Gossypium hirsutum HOM05D006286 ORTHO05D007741 3.6e-95 352.1 248 71.8
Ca_10810_v3 Cicer arietinum L. HOM05D006286 ORTHO05D007741 2.3e-94 349.4 235 73.2
Sopen03g002810 Solanum pennellii HOM05D006286 ORTHO05D007741 3.0e-94 349.0 240 72.5
PSO782G2014 Papaver somniferum HOM05D006286 ORTHO05D007741 5.2e-94 348.2 251 69.7
vmacro09869 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 5.2e-94 348.2 217 77.9
Actinidia25052 Actinidia chinensis HOM05D006286 ORTHO05D007741 6.8e-94 347.8 234 74.8
Solyc03g006820.3 Solanum lycopersicum HOM05D006286 ORTHO05D007741 6.8e-94 347.8 240 72.1
PSO478G4977 Papaver somniferum HOM05D006286 ORTHO05D007741 1.2e-93 347.1 242 71.9
Psat6g201680 Pisum sativum HOM05D006286 ORTHO05D007741 2.6e-93 345.9 223 75.8
PSO782G5477 Papaver somniferum HOM05D006286 ORTHO05D007741 3.4e-93 345.5 242 71.9
SGA_v2.0_scaffold113G31783 Striga asiatica HOM05D006286 ORTHO05D007741 5.7e-93 344.7 241 72.2
Actinidia14215 Actinidia chinensis HOM05D006286 ORTHO05D007741 7.5e-93 344.4 251 71.3
Nitab4.5_0004911g0020 Nicotiana tabacum HOM05D006286 ORTHO05D007741 7.5e-93 344.4 237 72.2
Ah.13g067810 Amaranthus hybridus HOM05D006286 ORTHO05D007741 6.3e-92 341.3 217 77.4
VMungo0720G2540 Vigna mungo HOM05D006286 ORTHO05D007741 6.3e-92 341.3 233 73.4
EL10Ac3g05740 Beta vulgaris HOM05D006286 ORTHO05D007741 1.1e-91 340.5 217 77.0
Aqoxy7G00487 Aquilegia oxysepala HOM05D006286 ORTHO05D007741 5.4e-91 338.2 217 75.6
Oeu047963.2 Olea europaea HOM05D006286 ORTHO05D007741 9.2e-91 337.4 243 70.4
CAN.G1097.8 Capsicum annuum HOM05D006286 ORTHO05D007741 1.6e-90 336.7 240 70.0
Aa31sc908G10 Aethionema arabicum HOM05D006286 ORTHO05D007741 2.0e-90 336.3 236 69.9
Peaxi162Scf00192g00519 Petunia axillaris HOM05D006286 ORTHO05D007741 2.0e-90 336.3 241 70.1
arahy.Tifrunner.gnm1.ann1.TWGE9F Arachis hypogaea HOM05D006286 ORTHO05D007741 2.7e-90 335.9 214 76.2
AUR62021266 Chenopodium quinoa HOM05D006286 ORTHO05D007741 7.8e-90 334.3 217 75.6
Migut.F00396 Erythranthe guttata HOM05D006286 ORTHO05D007741 2.3e-89 332.8 244 69.7
PGSC0003DMG400024248 Solanum tuberosum HOM05D006286 ORTHO05D007741 2.9e-89 332.4 240 69.6
ECA238G1566 Erigeron canadensis HOM05D006286 ORTHO05D007741 5.0e-89 331.6 235 70.2
THA.LOC104825086 Tarenaya hassleriana HOM05D006286 ORTHO05D007741 5.0e-89 331.6 248 68.1
MSTRG.8433 Avicennia marina HOM05D006286 ORTHO05D007741 8.6e-89 330.9 210 76.7
Sc13g0008250 Simmondsia chinensis HOM05D006286 ORTHO05D007741 1.5e-88 330.1 237 69.6
Thhalv10014484m.g Eutrema salsugineum HOM05D006286 ORTHO05D007741 2.5e-88 329.3 223 71.3
Lj8A31T63 Lonicera japonica HOM05D006286 ORTHO05D007741 4.3e-88 328.6 198 81.3
Carub.0008s1192 Capsella rubella HOM05D006286 ORTHO05D007741 2.1e-87 326.2 219 73.1
Sp6g14140 Schrenkiella parvula HOM05D006286 ORTHO05D007741 1.4e-86 323.6 229 70.3
AT5G51880 Arabidopsis thaliana HOM05D006286 ORTHO05D007741 8.9e-86 320.9 219 72.1
AL8G26180 Arabidopsis lyrata HOM05D006286 ORTHO05D007741 1.2e-85 320.5 219 72.1
BcaC04g20627 Brassica carinata HOM05D006286 ORTHO05D007741 5.8e-85 318.2 225 70.2
C09p41380 Brassica napus HOM05D006286 ORTHO05D007741 5.8e-85 318.2 225 70.2
BolC9t57014H Brassica oleracea HOM05D006286 ORTHO05D007741 5.8e-85 318.2 225 70.2
Nitab4.5_0000832g0010 Nicotiana tabacum HOM05D006286 ORTHO05D007741 7.5e-85 317.8 194 78.9
A10p09720 Brassica napus HOM05D006286 ORTHO05D007741 1.3e-84 317.0 227 69.2
BraA10t43052Z Brassica rapa HOM05D006286 ORTHO05D007741 1.3e-84 317.0 227 69.2
PGR042G3452 Punica granatum HOM05D006286 ORTHO05D007741 1.7e-84 316.6 194 81.4
Hund04686 Selenicereus undatus HOM05D006286 ORTHO05D007741 6.4e-84 314.7 208 73.1
AUR62016058 Chenopodium quinoa HOM05D006286 ORTHO05D007741 8.3e-84 314.3 194 78.9
BcaB08g35541 Brassica carinata HOM05D006286 ORTHO05D007741 1.4e-83 313.5 234 66.2
HPP92_003528 Vanilla planifolia HOM05D006286 ORTHO05D007741 4.1e-83 312.0 232 66.8
unitig_37.g11947 Utricularia gibba HOM05D006286 ORTHO05D007741 1.6e-82 310.1 222 67.1
vmacro06741 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 4.6e-82 308.5 204 75.0
ATR0757G128 Amborella trichopoda HOM05D006286 ORTHO05D007741 2.3e-81 306.2 234 63.7
Os03g0119000 Oryza sativa ssp. japonica HOM05D006286 ORTHO05D007741 8.6e-81 304.3 217 68.2
COL.COLO4_14231 Corchorus olitorius HOM05D006286 ORTHO05D007741 2.8e-79 299.3 192 76.6
CiPaw.15G075500 Carya illinoinensis HOM05D006286 ORTHO05D007741 1.7e-76 290.0 210 72.4
MBI12_g36686_MAGBIO Magnolia biondii HOM05D006286 ORTHO05D007741 7.0e-75 284.6 202 71.3
SalBow2G2245 Salvia bowleyana HOM05D006286 ORTHO05D007741 7.0e-75 284.6 241 61.8
CDE12G0688 Ceratophyllum demersum HOM05D006286 ORTHO05D007741 1.6e-74 283.5 194 69.1
CARHR264790 Cardamine hirsuta HOM05D006286 ORTHO05D007741 7.8e-74 281.2 198 70.2
Glyma.20G154300 Glycine max HOM05D006286 ORTHO05D007741 1.1e-72 277.3 203 70.4
Potri.012G133100 Populus trichocarpa HOM05D006286 ORTHO05D007741 2.9e-68 262.7 276 57.2
Mapoly0028s0137 Marchantia polymorpha HOM05D006286 ORTHO05D007741 1.4e-62 243.8 221 56.6
SMO139G0115 Selaginella moellendorffii HOM05D006286 ORTHO05D007741 6.8e-62 241.5 220 51.8
Gohir.D09G174800 Gossypium hirsutum HOM05D006286 ORTHO05D007741 3.2e-59 232.6 143 77.6
AagrBONN_evm.TU.Sc2ySwM_368.2699 Anthoceros agrestis HOM05D006286 ORTHO05D007741 8.7e-57 224.6 233 51.1
Actinidia03097 Actinidia chinensis HOM05D006286 ORTHO05D007741 4.3e-56 222.2 128 83.6
Pp3c22_4190 Physcomitrium patens HOM05D006286 ORTHO05D007741 4.3e-56 222.2 229 51.1
SEGI_34239 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 4.3e-56 222.2 176 61.4
Medtr1g101840 Medicago truncatula HOM05D006286 ORTHO05D007741 2.1e-55 219.9 140 77.9
Zm00001eb001360 Zea mays HOM05D006286 ORTHO05D007741 1.1e-54 217.6 193 57.0
SHI13825 Sapria himalayana HOM05D000350 ORTHO05D000228 9.3e-35 151.4 184 46.2
Actinidia13543 Actinidia chinensis HOM05D006286 ORTHO05D007741 4.5e-29 132.5 95 67.4
MCO04G355 Micromonas commoda HOM05D006286 ORTHO05D007741 1.6e-26 124.0 208 38.0
Cfa025685 Carpinus fangiana HOM05D006286 ORTHO05D007741 6.7e-25 118.6 250 32.8
Cre14.g619900 Chlamydomonas reinhardtii HOM05D006286 ORTHO05D007741 6.9e-22 108.6 218 33.9
RcHm_v2.0_Chr1g0376261 Rosa chinensis HOM05D006286 ORTHO05D007741 5.7e-16 89.0 48 83.3
FvH4_2g14060 Fragaria vesca HOM05D006286 ORTHO05D007741 1.7e-15 87.4 61 67.2
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 1.4e-14 84.3 48 83.3
MCO01G267 Micromonas commoda HOM05D049972 ORTHO05D049270 3.3e-08 63.2 217 25.3
MCO03G036 Micromonas commoda HOM05D037152 ORTHO05D034124 1.8e-06 57.4 222 27.5
SEGI_15131 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 4.1e-06 56.2 34 76.5


User provided reference genes

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