Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p014582 Quercus lobata HOM05D006363 ORTHO05D007920 2.7e-109 398.7 203 100.0
Cfa008303 Carpinus fangiana HOM05D006363 ORTHO05D007920 2.6e-91 339.0 197 84.8
Haze_13734 Corylus avellana HOM05D006363 ORTHO05D007920 6.3e-90 334.3 198 83.8
Glyma.20G157100 Glycine max HOM05D006363 ORTHO05D007920 3.5e-88 328.6 195 85.1
Medtr1g100753 Medicago truncatula HOM05D006363 ORTHO05D007920 1.3e-87 326.6 196 84.2
Cpa.g.sc107.33 Carica papaya HOM05D006363 ORTHO05D007920 2.3e-87 325.9 203 79.3
Sabra15G0151200 Salix brachista HOM05D006363 ORTHO05D007920 3.9e-87 325.1 203 78.8
VMungo0720G1872 Vigna mungo HOM05D006363 ORTHO05D007920 6.6e-87 324.3 195 83.1
CiPaw.03G104700 Carya illinoinensis HOM05D006363 ORTHO05D007920 1.5e-86 323.2 196 83.2
Glyma.10G237500 Glycine max HOM05D006363 ORTHO05D007920 1.9e-86 322.8 196 83.2
Phvul.007G068100 Phaseolus vulgaris HOM05D006363 ORTHO05D007920 4.3e-86 321.6 193 82.9
Psat6g200600 Pisum sativum HOM05D006363 ORTHO05D007920 4.3e-86 321.6 196 82.1
Ca_10782_v3 Cicer arietinum L. HOM05D006363 ORTHO05D007920 5.6e-86 321.2 197 82.2
LjContig00238g0019616 Lotus japonicus HOM05D006363 ORTHO05D007920 1.2e-85 320.1 196 83.2
TPR.G14326 Trifolium pratense HOM05D006363 ORTHO05D007920 2.1e-85 319.3 202 81.7
MD01G1199000 Malus domestica HOM05D006363 ORTHO05D007920 3.6e-85 318.5 196 81.6
FAN06G3284 Fragaria x ananassa HOM05D006363 ORTHO05D007920 6.1e-85 317.8 201 80.1
FAN06G3928 Fragaria x ananassa HOM05D006363 ORTHO05D007920 6.1e-85 317.8 201 80.1
Prupe.2G292400 Prunus persica HOM05D006363 ORTHO05D007920 8.0e-85 317.4 202 79.7
TWI39G0139 Tripterygium wilfordii HOM05D006363 ORTHO05D007920 1.0e-84 317.0 203 77.3
FvH4_7g29240 Fragaria vesca HOM05D006363 ORTHO05D007920 1.4e-84 316.6 201 79.6
RcHm_v2.0_Chr1g0376991 Rosa chinensis HOM05D006363 ORTHO05D007920 1.4e-84 316.6 201 79.6
FAN10G0438 Fragaria x ananassa HOM05D006363 ORTHO05D007920 3.1e-84 315.5 201 79.1
Ciclev10007013m.g Citrus clementina HOM05D006363 ORTHO05D007920 4.0e-84 315.1 198 80.3
Potri.015G140600 Populus trichocarpa HOM05D006363 ORTHO05D007920 5.2e-84 314.7 198 78.3
Manes.07G111200 Manihot esculenta HOM05D006363 ORTHO05D007920 8.9e-84 313.9 201 78.1
MD07G1266800 Malus domestica HOM05D006363 ORTHO05D007920 1.2e-83 313.5 196 81.6
PGR042G3170 Punica granatum HOM05D006363 ORTHO05D007920 3.4e-83 312.0 205 76.6
FAN03G1027 Fragaria x ananassa HOM05D006363 ORTHO05D007920 4.4e-83 311.6 201 79.1
Thecc.03G174500 Theobroma cacao HOM05D006363 ORTHO05D007920 4.4e-83 311.6 203 79.8
Duzib205G1779 Durio zibethinus HOM05D006363 ORTHO05D007920 1.1e-81 307.0 203 78.3
Gohir.D12G260100 Gossypium hirsutum HOM05D006363 ORTHO05D007920 9.2e-81 303.9 203 78.8
Gohir.A12G258900 Gossypium hirsutum HOM05D006363 ORTHO05D007920 1.2e-80 303.5 197 80.7
Gorai.008G278600 Gossypium raimondii HOM05D006363 ORTHO05D007920 2.0e-80 302.8 203 78.3
COL.COLO4_14288 Corchorus olitorius HOM05D006363 ORTHO05D007920 6.0e-80 301.2 203 77.8
CsaV3_3G016980 Cucumis sativus L. HOM05D006363 ORTHO05D007920 6.0e-80 301.2 197 75.1
FAN03G1282 Fragaria x ananassa HOM05D006363 ORTHO05D007920 7.8e-80 300.8 201 77.6
Lalb_Chr02g0140961 Lupinus albus HOM05D006363 ORTHO05D007920 1.0e-79 300.4 203 73.4
CARHR265110 Cardamine hirsuta HOM05D006363 ORTHO05D007920 2.3e-79 299.3 197 76.6
THA.LOC104811988 Tarenaya hassleriana HOM05D006363 ORTHO05D007920 5.0e-79 298.1 200 74.5
MELO3C006895.2 Cucumis melo HOM05D006363 ORTHO05D007920 6.6e-79 297.7 197 75.1
Thhalv10015742m.g Eutrema salsugineum HOM05D006363 ORTHO05D007920 3.3e-78 295.4 196 75.5
Carub.0008s1228 Capsella rubella HOM05D006363 ORTHO05D007920 9.5e-78 293.9 201 74.6
Atru.chr1.482 Acer truncatum HOM05D006363 ORTHO05D007920 1.6e-77 293.1 197 76.1
Sed0019375 Sechium edule HOM05D006363 ORTHO05D007920 2.1e-77 292.7 199 75.4
AT5G52190 Arabidopsis thaliana HOM05D006363 ORTHO05D007920 2.8e-77 292.4 204 73.0
AL8G26570 Arabidopsis lyrata HOM05D006363 ORTHO05D007920 4.7e-77 291.6 201 75.1
vmacro09843 Vaccinium macrocarpon HOM05D006363 ORTHO05D007920 1.1e-76 290.4 196 76.5
BraA03t10870Z Brassica rapa HOM05D006363 ORTHO05D007920 1.8e-76 289.7 196 74.5
Aa31LG3G8570 Aethionema arabicum HOM05D006363 ORTHO05D007920 8.9e-76 287.3 196 74.0
BcaB01g04190 Brassica carinata HOM05D006363 ORTHO05D007920 1.2e-75 287.0 196 73.5
BcaC01g06171 Brassica carinata HOM05D006363 ORTHO05D007920 2.6e-75 285.8 200 72.5
Sp6g14440 Schrenkiella parvula HOM05D006363 ORTHO05D007920 2.6e-75 285.8 203 73.4
EL10Ac3g05667 Beta vulgaris HOM05D006363 ORTHO05D007920 5.8e-75 284.6 194 73.7
AUR62021214 Chenopodium quinoa HOM05D006363 ORTHO05D007920 5.8e-75 284.6 203 71.9
BolC3t14244H Brassica oleracea HOM05D006363 ORTHO05D007920 1.3e-74 283.5 200 71.5
C03p18470 Brassica napus HOM05D006363 ORTHO05D007920 1.7e-74 283.1 200 72.0
Rhsim09G0197500 Rhododendron simsii HOM05D006363 ORTHO05D007920 2.9e-74 282.3 196 74.0
AUR62016007 Chenopodium quinoa HOM05D006363 ORTHO05D007920 4.9e-74 281.6 193 74.1
CSS0028509 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 4.1e-73 278.5 198 71.2
CSS0002932 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 4.6e-72 275.0 198 71.2
Dinv28459 Davidia involucrata HOM05D006363 ORTHO05D007920 6.0e-72 274.6 200 70.0
CANSAT21G2254 Cannabis sativa HOM05D006363 ORTHO05D007920 7.8e-72 274.2 203 70.9
CANSAT21G0627 Cannabis sativa HOM05D006363 ORTHO05D007920 1.3e-71 273.5 203 71.9
Cc03_g13850 Coffea canephora HOM05D006363 ORTHO05D007920 3.9e-71 271.9 203 68.5
Lj8C25T12 Lonicera japonica HOM05D006363 ORTHO05D007920 6.6e-71 271.2 197 72.6
Peaxi162Scf00915g00018 Petunia axillaris HOM05D006363 ORTHO05D007920 6.6e-71 271.2 201 70.6
Migut.F01133 Erythranthe guttata HOM05D006363 ORTHO05D007920 4.3e-70 268.5 200 67.0
Eucgr.A02801 Eucalyptus grandis HOM05D006363 ORTHO05D007920 4.3e-70 268.5 204 69.1
Lsat_1_v5_gn_2_133820 Lactuca sativa HOM05D006363 ORTHO05D007920 3.6e-69 265.4 197 67.5
Oeu062762.2 Olea europaea HOM05D006363 ORTHO05D007920 3.6e-69 265.4 201 67.2
GSVIVG01010552001 Vitis vinifera HOM05D006363 ORTHO05D007920 4.7e-69 265.0 204 69.6
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 1.1e-68 263.8 194 69.1
ECA238G0548 Erigeron canadensis HOM05D006363 ORTHO05D007920 1.4e-68 263.5 200 68.0
PGSC0003DMG400014325 Solanum tuberosum HOM05D006363 ORTHO05D007920 2.3e-68 262.7 201 69.2
HanXRQChr14g0462221 Helianthus annuus HOM05D006363 ORTHO05D007920 6.8e-68 261.2 197 68.0
MSTRG.8448 Avicennia marina HOM05D006363 ORTHO05D007920 1.5e-67 260.0 195 68.7
Solyc03g025990.1 Solanum lycopersicum HOM05D006363 ORTHO05D007920 2.0e-67 259.6 195 70.3
Nn6g34197 Nelumbo nucifera HOM05D006363 ORTHO05D007920 2.6e-67 259.2 207 64.7
Sopen03g004810 Solanum pennellii HOM05D006363 ORTHO05D007920 4.4e-67 258.5 195 69.7
Nitab4.5_0001508g0030 Nicotiana tabacum HOM05D006363 ORTHO05D007920 7.6e-67 257.7 201 67.2
Aqoxy7G00395 Aquilegia oxysepala HOM05D006363 ORTHO05D007920 4.1e-65 251.9 206 64.6
Nitab4.5_0000716g0210 Nicotiana tabacum HOM05D006363 ORTHO05D007920 9.2e-65 250.8 193 68.4
DCAR_018188 Daucus carota HOM05D006363 ORTHO05D007920 6.6e-63 244.6 201 61.2
PSO782G5704 Papaver somniferum HOM05D006363 ORTHO05D007920 1.9e-62 243.0 214 60.3
unitig_60.g25545 Utricularia gibba HOM05D006363 ORTHO05D007920 9.6e-62 240.7 197 65.5
TAR375G0304 Trochodendron aralioides HOM05D006363 ORTHO05D007920 2.1e-61 239.6 197 63.5
MBI04_g04731_MAGBIO Magnolia biondii HOM05D006363 ORTHO05D007920 8.9e-60 234.2 202 60.9
PSO478G1739 Papaver somniferum HOM05D006363 ORTHO05D007920 8.9e-60 234.2 213 58.7
CAN.G947.11 Capsicum annuum HOM05D006363 ORTHO05D007920 1.5e-59 233.4 194 66.0
FAN01G1422 Fragaria x ananassa HOM05D006363 ORTHO05D007920 2.6e-59 232.6 201 62.2
CDE04G1845 Ceratophyllum demersum HOM05D006363 ORTHO05D007920 6.0e-56 221.5 195 62.1
A03p15800 Brassica napus HOM05D006363 ORTHO05D007920 9.6e-54 214.2 142 76.8
Zm00001eb428810 Zea mays HOM05D006363 ORTHO05D007920 6.2e-53 211.5 216 56.0
ATR0757G111 Amborella trichopoda HOM05D006363 ORTHO05D007920 2.0e-51 206.5 203 54.7
Os04g0568600 Oryza sativa ssp. japonica HOM05D006363 ORTHO05D007920 7.6e-51 204.5 193 57.0
HPP92_021110 Vanilla planifolia HOM05D006363 ORTHO05D007920 9.9e-51 204.1 182 59.3
Sc25g0000440 Simmondsia chinensis HOM05D006363 ORTHO05D007920 1.6e-45 186.8 160 64.4
SalBow2G2214 Salvia bowleyana HOM05D006363 ORTHO05D007920 3.2e-41 172.6 141 65.2
A08p37210 Brassica napus HOM05D006363 ORTHO05D007920 5.5e-41 171.8 127 70.1
SEGI_31787 Sequoiadendron giganteum HOM05D006363 ORTHO05D007920 3.5e-40 169.1 196 49.5
Pp3c6_24270 Physcomitrium patens HOM05D006363 ORTHO05D007920 2.3e-39 166.4 209 45.9
SMO367G0077 Selaginella moellendorffii HOM05D006363 ORTHO05D007920 1.1e-38 164.1 171 58.5
BcaC01g06168 Brassica carinata HOM05D006363 ORTHO05D007920 5.3e-28 128.6 96 67.7
BcaC06g36545 Brassica carinata HOM05D006363 ORTHO05D007920 5.5e-25 118.6 86 68.6
Mapoly0047s0087 Marchantia polymorpha HOM05D006363 ORTHO05D007920 3.1e-20 102.8 116 53.4
TPR.G33086 Trifolium pratense HOM05D006363 ORTHO05D007920 7.7e-19 98.2 59 88.1
BolC5t32613H Brassica oleracea HOM05D006363 ORTHO05D007920 1.9e-17 93.6 66 71.2
C05p38730 Brassica napus HOM05D006363 ORTHO05D007920 7.2e-17 91.7 66 69.7
TAR633G0106 Trochodendron aralioides HOM05D006363 ORTHO05D007920 2.7e-16 89.7 75 61.3
Pp3c17_12800 Physcomitrium patens HOM05D006363 ORTHO05D007920 1.8e-15 87.0 151 36.4
TAR291G0005 Trochodendron aralioides HOM05D006363 ORTHO05D007920 8.8e-15 84.7 74 60.8
TAR375G0495 Trochodendron aralioides HOM05D006363 ORTHO05D007920 8.8e-15 84.7 74 60.8
TAR624G1193 Trochodendron aralioides HOM05D006363 ORTHO05D007920 8.8e-15 84.7 74 60.8
BcaC01g06167 Brassica carinata HOM05D006363 ORTHO05D007920 1.1e-14 84.3 46 87.0
Actinidia03116 Actinidia chinensis HOM05D006363 ORTHO05D007920 2.0e-14 83.6 110 48.2
TAR614G0003 Trochodendron aralioides HOM05D006363 ORTHO05D007920 2.0e-14 83.6 74 60.8
TAR633G1276 Trochodendron aralioides HOM05D006363 ORTHO05D007920 2.0e-14 83.6 74 60.8
TAR629G0450 Trochodendron aralioides HOM05D006363 ORTHO05D007920 7.4e-14 81.6 74 59.5
TAR383G0849 Trochodendron aralioides HOM05D003653 ORTHO05D004249 1.3e-13 80.9 74 58.1
BcaC05g27871 Brassica carinata HOM05D006363 ORTHO05D007920 1.2e-08 64.3 103 45.6
A01p23910 Brassica napus HOM05D006363 ORTHO05D007920 4.7e-08 62.4 48 64.6
BraA01t02298Z Brassica rapa HOM05D006363 ORTHO05D007920 4.7e-08 62.4 48 64.6


User provided reference genes

Program Settings