Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p013882 Quercus lobata HOM05D001607 ORTHO05D001893 1.3e-78 296.2 142 100.0
Cfa022712 Carpinus fangiana HOM05D001607 ORTHO05D001893 7.2e-48 194.1 124 79.0
TAR375G0166 Trochodendron aralioides HOM05D001607 ORTHO05D001893 2.4e-43 179.1 123 70.7
Atru.chr1.433 Acer truncatum HOM05D001607 ORTHO05D001893 9.1e-43 177.2 128 68.0
CSS0006931 Camellia sinensis var. sinensis HOM05D001607 ORTHO05D001893 2.0e-42 176.0 124 71.8
Haze_13673 Corylus avellana HOM05D001607 ORTHO05D001893 2.6e-42 175.6 114 78.1
Manes.06G148500 Manihot esculenta HOM05D001607 ORTHO05D001893 2.6e-42 175.6 124 68.5
Gohir.D08G110708 Gossypium hirsutum HOM05D001607 ORTHO05D001893 5.9e-42 174.5 124 72.6
Gorai.004G118400 Gossypium raimondii HOM05D001607 ORTHO05D001893 5.9e-42 174.5 124 72.6
CiPaw.04G071800 Carya illinoinensis HOM05D001607 ORTHO05D001893 7.7e-42 174.1 123 71.5
Gohir.A08G099300 Gossypium hirsutum HOM05D001607 ORTHO05D001893 1.3e-41 173.3 124 71.8
GSVIVG01028929001 Vitis vinifera HOM05D001607 ORTHO05D001893 2.2e-41 172.6 119 72.3
Duzib068G0651 Durio zibethinus HOM05D001607 ORTHO05D001893 6.5e-41 171.0 123 72.4
Duzib205G1855 Durio zibethinus HOM05D001607 ORTHO05D001893 6.5e-41 171.0 124 72.6
Actinidia34121 Actinidia chinensis HOM05D001607 ORTHO05D001893 2.5e-40 169.1 124 66.9
Nn1g01507 Nelumbo nucifera HOM05D001607 ORTHO05D001893 5.5e-40 167.9 132 64.4
Lalb_Chr19g0130771 Lupinus albus HOM05D001607 ORTHO05D001893 1.2e-39 166.8 118 72.0
Thecc.03G178600 Theobroma cacao HOM05D001607 ORTHO05D001893 1.6e-39 166.4 121 67.8
COL.COLO4_14332 Corchorus olitorius HOM05D001607 ORTHO05D001893 2.1e-39 166.0 91 83.5
vmacro06667 Vaccinium macrocarpon HOM05D001607 ORTHO05D001893 2.1e-39 166.0 125 66.4
Lj1A999G29 Lonicera japonica HOM05D001607 ORTHO05D001893 3.6e-39 165.2 93 78.5
Gorai.007G011200 Gossypium raimondii HOM05D001607 ORTHO05D001893 4.7e-39 164.9 121 67.8
Actinidia25880 Actinidia chinensis HOM05D001607 ORTHO05D001893 1.0e-38 163.7 121 65.3
Gohir.A11G010500 Gossypium hirsutum HOM05D001607 ORTHO05D001893 1.4e-38 163.3 121 66.9
Gohir.D11G009700 Gossypium hirsutum HOM05D001607 ORTHO05D001893 1.4e-38 163.3 121 66.9
Ciclev10004167m.g Citrus clementina HOM05D001607 ORTHO05D001893 3.0e-38 162.2 98 77.6
PGR042G0514 Punica granatum HOM05D001607 ORTHO05D001893 3.0e-38 162.2 117 69.2
arahy.Tifrunner.gnm1.ann1.GK85WT Arachis hypogaea HOM05D001607 ORTHO05D001893 1.1e-37 160.2 121 64.5
MBI18_g25519_MAGBIO Magnolia biondii HOM05D001607 ORTHO05D001893 3.3e-37 158.7 117 64.1
Solyc03g025630.3 Solanum lycopersicum HOM05D001607 ORTHO05D001893 3.3e-37 158.7 99 74.7
Sopen03g004450 Solanum pennellii HOM05D001607 ORTHO05D001893 3.3e-37 158.7 99 74.7
Lj2g0000053 Lotus japonicus HOM05D001607 ORTHO05D001893 4.4e-37 158.3 119 67.2
Peaxi162Scf00444g00722 Petunia axillaris HOM05D001607 ORTHO05D001893 5.7e-37 157.9 119 63.9
Eucgr.A02778 Eucalyptus grandis HOM05D001607 ORTHO05D001893 9.7e-37 157.1 112 65.2
arahy.Tifrunner.gnm1.ann1.CMMP9X Arachis hypogaea HOM05D001607 ORTHO05D001893 1.3e-36 156.8 121 63.6
Glyma.09G137200 Glycine max HOM05D001607 ORTHO05D001893 1.3e-36 156.8 119 64.7
MD01G1203100 Malus domestica HOM05D001607 ORTHO05D001893 1.7e-36 156.4 91 76.9
CAN.G307.23 Capsicum annuum HOM05D001607 ORTHO05D001893 2.2e-36 156.0 99 74.7
Glyma.16G182500 Glycine max HOM05D001607 ORTHO05D001893 2.2e-36 156.0 119 63.0
Potri.012G142200 Populus trichocarpa HOM05D001607 ORTHO05D001893 2.2e-36 156.0 91 76.9
MD07G1272600 Malus domestica HOM05D001607 ORTHO05D001893 2.8e-36 155.6 119 63.0
Nitab4.5_0005845g0040 Nicotiana tabacum HOM05D001607 ORTHO05D001893 2.8e-36 155.6 119 63.0
Cpa.g.sc107.64 Carica papaya HOM05D001607 ORTHO05D001893 4.8e-36 154.8 119 67.2
Eucgr.A02780 Eucalyptus grandis HOM05D001607 ORTHO05D001893 4.8e-36 154.8 94 73.4
VMungo0464G1130 Vigna mungo HOM05D001607 ORTHO05D001893 4.8e-36 154.8 90 80.0
Aqoxy1G00239 Aquilegia oxysepala HOM05D001607 ORTHO05D001893 6.3e-36 154.5 106 67.0
Phvul.004G114200 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 8.2e-36 154.1 91 80.2
Psat6g198240 Pisum sativum HOM05D001607 ORTHO05D001893 1.1e-35 153.7 117 65.8
ATR0680G301 Amborella trichopoda HOM05D001607 ORTHO05D001893 1.4e-35 153.3 120 61.7
TPR.G8164 Trifolium pratense HOM05D001607 ORTHO05D001893 1.8e-35 152.9 126 62.7
Medtr0025s0060 Medicago truncatula HOM05D001607 ORTHO05D001893 2.4e-35 152.5 116 68.1
Lalb_Chr02g0141081 Lupinus albus HOM05D001607 ORTHO05D001893 3.1e-35 152.1 120 61.7
SalBow4G1573 Salvia bowleyana HOM05D001607 ORTHO05D001893 3.1e-35 152.1 119 59.7
Potri.015G145300 Populus trichocarpa HOM05D001607 ORTHO05D001893 5.3e-35 151.4 91 75.8
arahy.Tifrunner.gnm1.ann1.HZL4S5 Arachis hypogaea HOM05D001607 ORTHO05D001893 7.0e-35 151.0 120 63.3
Prupe.2G295900 Prunus persica HOM05D001607 ORTHO05D001893 7.0e-35 151.0 116 62.1
Sed0028131 Sechium edule HOM05D001607 ORTHO05D001893 7.0e-35 151.0 119 58.8
CANSAT21G1423 Cannabis sativa HOM05D001607 ORTHO05D001893 9.1e-35 150.6 94 71.3
Medtr1g101030 Medicago truncatula HOM05D001607 ORTHO05D001893 9.1e-35 150.6 117 62.4
Hund04843 Selenicereus undatus HOM05D001607 ORTHO05D001893 9.1e-35 150.6 91 71.4
CsaV3_5G004660 Cucumis sativus L. HOM05D001607 ORTHO05D001893 1.2e-34 150.2 119 59.7
FvH4_7g29630 Fragaria vesca HOM05D001607 ORTHO05D001893 1.2e-34 150.2 112 66.1
FAN06G1924 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.2e-34 150.2 112 66.1
FAN06G4239 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.2e-34 150.2 112 66.1
arahy.Tifrunner.gnm1.ann1.7UXB07 Arachis hypogaea HOM05D001607 ORTHO05D001893 1.6e-34 149.8 119 63.0
ClCG01G004440 Citrullus lanatus HOM05D001607 ORTHO05D001893 1.6e-34 149.8 119 59.7
Sabra12G0106800 Salix brachista HOM05D001607 ORTHO05D001893 1.6e-34 149.8 91 73.6
SGA_v2.0_scaffold44G16733 Striga asiatica HOM05D001607 ORTHO05D001893 1.6e-34 149.8 100 66.0
TWI39G1280 Tripterygium wilfordii HOM05D001607 ORTHO05D001893 2.0e-34 149.4 121 56.2
unitig_46.g18793 Utricularia gibba HOM05D001607 ORTHO05D001893 2.0e-34 149.4 119 57.1
TPR.G26981 Trifolium pratense HOM05D001607 ORTHO05D001893 2.6e-34 149.1 104 69.2
RcHm_v2.0_Chr1g0377641 Rosa chinensis HOM05D001607 ORTHO05D001893 3.5e-34 148.7 112 67.0
MSTRG.27107 Avicennia marina HOM05D001607 ORTHO05D001893 4.5e-34 148.3 91 70.3
SGA_v2.0_scaffold60G21061 Striga asiatica HOM05D001607 ORTHO05D001893 4.5e-34 148.3 119 58.8
Psat0s3405g0080 Pisum sativum HOM05D001607 ORTHO05D001893 7.7e-34 147.5 115 66.1
FAN01G0648 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.0e-33 147.1 112 65.2
Ca_10751_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 1.3e-33 146.7 117 62.4
AUR62021171 Chenopodium quinoa HOM05D001607 ORTHO05D001893 2.2e-33 146.0 122 57.4
Migut.F00330 Erythranthe guttata HOM05D001607 ORTHO05D001893 2.2e-33 146.0 98 66.3
FAN10G1529 Fragaria x ananassa HOM05D001607 ORTHO05D001893 2.9e-33 145.6 112 65.2
FAN03G1039 Fragaria x ananassa HOM05D001607 ORTHO05D001893 3.8e-33 145.2 112 64.3
Lj5g0010480 Lotus japonicus HOM05D001607 ORTHO05D001893 8.5e-33 144.1 118 61.0
AUR62015965 Chenopodium quinoa HOM05D001607 ORTHO05D001893 1.1e-32 143.7 122 56.6
Phvul.007G071600 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 1.5e-32 143.3 113 64.6
FAN03G1056 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.9e-32 142.9 112 63.4
Sc25g0000580 Simmondsia chinensis HOM05D001607 ORTHO05D001893 1.9e-32 142.9 104 62.5
ECA233G5223 Erigeron canadensis HOM05D001607 ORTHO05D001893 2.5e-32 142.5 103 66.0
FAN10G2541 Fragaria x ananassa HOM05D001607 ORTHO05D001893 2.5e-32 142.5 112 64.3
Glyma.10G234500 Glycine max HOM05D001607 ORTHO05D001893 2.5e-32 142.5 118 61.9
DCAR_001509 Daucus carota HOM05D001607 ORTHO05D001893 4.2e-32 141.7 114 62.3
MELO3C005470.2 Cucumis melo HOM05D001607 ORTHO05D001893 9.4e-32 140.6 142 51.4
PSO478G2555 Papaver somniferum HOM05D001607 ORTHO05D001893 9.4e-32 140.6 100 62.0
arahy.Tifrunner.gnm1.ann1.B9FIPF Arachis hypogaea HOM05D001607 ORTHO05D001893 1.2e-31 140.2 105 65.7
EL10Ac3g05618 Beta vulgaris HOM05D001607 ORTHO05D001893 1.2e-31 140.2 114 57.9
Os02g0664300 Oryza sativa ssp. japonica HOM05D001607 ORTHO05D001893 2.1e-31 139.4 91 67.0
PSO782G3230 Papaver somniferum HOM05D001607 ORTHO05D001893 2.1e-31 139.4 107 60.7
Rhsim03G0187200 Rhododendron simsii HOM05D001607 ORTHO05D001893 6.1e-31 137.9 115 60.9
VMungo0720G1584 Vigna mungo HOM05D001607 ORTHO05D001893 6.1e-31 137.9 113 61.9
AT4G20850 Arabidopsis thaliana HOM05D001607 ORTHO05D001893 8.0e-31 137.5 90 70.0
AL7G33300 Arabidopsis lyrata HOM05D001607 ORTHO05D001893 1.8e-30 136.3 104 64.4
THA.LOC104824860 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 2.3e-30 136.0 99 65.7
BcaNung05068 Brassica carinata HOM05D001607 ORTHO05D001893 4.0e-30 135.2 103 62.1
C07p50960 Brassica napus HOM05D001607 ORTHO05D001893 4.0e-30 135.2 103 62.1
BolC7t45597H Brassica oleracea HOM05D001607 ORTHO05D001893 4.0e-30 135.2 103 62.1
CDE08G1124 Ceratophyllum demersum HOM05D001607 ORTHO05D001893 4.0e-30 135.2 104 62.5
BraA03t14327Z Brassica rapa HOM05D001607 ORTHO05D001893 5.2e-30 134.8 116 56.0
Lsat_1_v5_gn_8_8420 Lactuca sativa HOM05D001607 ORTHO05D001893 5.2e-30 134.8 119 52.1
THA.LOC104824854 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 6.7e-30 134.4 103 62.1
A03p52520 Brassica napus HOM05D001607 ORTHO05D001893 8.8e-30 134.0 116 56.9
Carub.0007s2059 Capsella rubella HOM05D001607 ORTHO05D001893 8.8e-30 134.0 90 67.8
Thhalv10024222m.g Eutrema salsugineum HOM05D001607 ORTHO05D001893 8.8e-30 134.0 116 56.0
CARHR227400 Cardamine hirsuta HOM05D001607 ORTHO05D001893 1.5e-29 133.3 90 67.8
Nitab4.5_0001842g0120 Nicotiana tabacum HOM05D001607 ORTHO05D001893 2.6e-29 132.5 92 68.5
Sp7g18940 Schrenkiella parvula HOM05D001607 ORTHO05D001893 4.4e-29 131.7 104 63.5
Aa31LG6G2920 Aethionema arabicum HOM05D001607 ORTHO05D001893 5.7e-29 131.3 97 63.9
BcaNung05685 Brassica carinata HOM05D001607 ORTHO05D001893 5.7e-29 131.3 99 60.6
THA.LOC104812206 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 1.3e-28 130.2 116 55.2
HPP92_011359 Vanilla planifolia HOM05D001607 ORTHO05D001893 1.3e-28 130.2 114 54.4
Ca_27533_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 8.2e-28 127.5 97 69.1
BcaNung04147 Brassica carinata HOM05D001607 ORTHO05D001893 1.4e-27 126.7 94 61.7
A01p12270 Brassica napus HOM05D001607 ORTHO05D001893 1.4e-27 126.7 104 60.6
Zm00001eb249900 Zea mays HOM05D001607 ORTHO05D001893 1.4e-27 126.7 108 55.6
BraA01t01171Z Brassica rapa HOM05D001607 ORTHO05D001893 3.1e-27 125.6 104 59.6
Mapoly0069s0029 Marchantia polymorpha HOM05D001607 ORTHO05D001893 5.3e-27 124.8 126 46.0
C01p14680 Brassica napus HOM05D001607 ORTHO05D001893 1.2e-26 123.6 110 55.5
BolC1t01419H Brassica oleracea HOM05D001607 ORTHO05D001893 1.2e-26 123.6 110 55.5
BcaC09g51300 Brassica carinata HOM05D001607 ORTHO05D001893 3.5e-26 122.1 90 61.1
HPP92_011358 Vanilla planifolia HOM05D001607 ORTHO05D001893 1.0e-25 120.6 84 61.9
Pp3c7_23000 Physcomitrium patens HOM05D001607 ORTHO05D001893 3.8e-25 118.6 103 51.5
HanXRQChr10g0304171 Helianthus annuus HOM05D001607 ORTHO05D001893 1.5e-24 116.7 119 51.3
Pp3c2_32420 Physcomitrium patens HOM05D001607 ORTHO05D001893 4.2e-24 115.2 119 44.5
arahy.Tifrunner.gnm1.ann1.M3PRP5 Arachis hypogaea HOM05D001607 ORTHO05D001893 3.6e-23 112.1 97 60.8
AagrBONN_evm.TU.Sc2ySwM_344.3434 Anthoceros agrestis HOM05D001607 ORTHO05D001893 2.0e-21 106.3 86 50.0
SMO367G0172 Selaginella moellendorffii HOM05D001607 ORTHO05D001893 5.7e-21 104.8 121 39.7
arahy.Tifrunner.gnm1.ann1.2YSW8E Arachis hypogaea HOM05D001607 ORTHO05D001893 1.3e-20 103.6 96 58.3
COL.COLO4_14279 Corchorus olitorius HOM05D000257 ORTHO05D009129 7.0e-19 97.8 53 79.2
MELO3C034501.2 Cucumis melo HOM05D001607 ORTHO05D001893 9.5e-16 87.4 57 66.7
PGSC0003DMG400019983 Solanum tuberosum HOM05D001607 ORTHO05D000214 1.4e-11 73.6 49 67.3
PRCOL_00005219 Prasinoderma coloniale HOM05D001607 ORTHO05D001893 2.3e-09 66.2 80 38.8
Ah.07g207010 Amaranthus hybridus HOM05D001607 ORTHO05D001893 5.6e-08 61.6 79 45.6
SHI13772 Sapria himalayana HOM05D001607 ORTHO05D001893 3.6e-07 58.9 46 60.9
SEGI_36427 Sequoiadendron giganteum HOM05D001607 ORTHO05D001893 2.3e-06 56.2 39 61.5


User provided reference genes

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