Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p013340 Quercus lobata HOM05D006715 ORTHO05D008345 0.0e+00 1245.3 625 100.0
Cfa018312 Carpinus fangiana HOM05D006715 ORTHO05D008345 3.4e-219 765.4 662 63.6
CiPaw.16G011000 Carya illinoinensis HOM05D006715 ORTHO05D008345 9.4e-185 651.0 603 60.2
MD05G1027900 Malus domestica HOM05D006715 ORTHO05D008345 1.7e-178 630.2 676 54.4
Prupe.8G033600 Prunus persica HOM05D006715 ORTHO05D008345 1.8e-172 610.1 664 54.5
RcHm_v2.0_Chr6g0275051 Rosa chinensis HOM05D006715 ORTHO05D008345 1.7e-170 603.6 668 53.1
FvH4_2g13430 Fragaria vesca HOM05D006715 ORTHO05D008345 1.4e-167 594.0 669 51.1
FAN24G1213 Fragaria x ananassa HOM05D006715 ORTHO05D008345 8.9e-167 591.3 669 51.0
Haze_17767 Corylus avellana HOM05D006715 ORTHO05D008345 1.7e-162 577.0 408 72.5
Manes.02G180601 Manihot esculenta HOM05D006715 ORTHO05D008345 1.5e-158 563.9 665 48.6
Potri.005G193500 Populus trichocarpa HOM05D006715 ORTHO05D008345 2.4e-156 556.6 651 50.2
Thecc.08G154500 Theobroma cacao HOM05D006715 ORTHO05D008345 1.0e-154 551.2 662 49.1
TWI34G0194 Tripterygium wilfordii HOM05D006715 ORTHO05D008345 8.6e-154 548.1 696 47.3
Ciclev10000601m.g Citrus clementina HOM05D006715 ORTHO05D008345 9.5e-153 544.7 656 49.1
Duzib093G1010 Durio zibethinus HOM05D006715 ORTHO05D008345 4.7e-152 542.3 658 48.0
arahy.Tifrunner.gnm1.ann1.6MC3QX Arachis hypogaea HOM05D006715 ORTHO05D008345 1.8e-151 540.4 689 46.7
ClCG08G002210 Citrullus lanatus HOM05D006715 ORTHO05D008345 3.1e-151 539.7 668 48.1
Atru.chr13.2084 Acer truncatum HOM05D006715 ORTHO05D008345 5.2e-151 538.9 638 49.4
CANSAT25G3857 Cannabis sativa HOM05D006715 ORTHO05D008345 5.8e-150 535.4 694 47.0
Psat1g102000 Pisum sativum HOM05D006715 ORTHO05D008345 5.8e-150 535.4 655 48.2
Actinidia17784 Actinidia chinensis HOM05D006715 ORTHO05D008345 1.7e-149 533.9 677 46.4
Lj2g0009741 Lotus japonicus HOM05D006715 ORTHO05D008345 2.9e-149 533.1 653 49.0
Medtr2g045070 Medicago truncatula HOM05D006715 ORTHO05D008345 1.6e-147 527.3 654 49.1
arahy.Tifrunner.gnm1.ann1.SG7PGU Arachis hypogaea HOM05D006715 ORTHO05D008345 2.7e-147 526.6 708 45.3
RcHm_v2.0_Chr5g0050861 Rosa chinensis HOM05D006715 ORTHO05D008345 8.6e-146 521.5 547 53.2
MELO3C025024.2 Cucumis melo HOM05D006715 ORTHO05D008345 1.1e-145 521.2 663 46.5
Lj7A376T34 Lonicera japonica HOM05D006715 ORTHO05D008345 4.0e-143 512.7 662 45.8
Phvul.004G094200 Phaseolus vulgaris HOM05D006715 ORTHO05D008345 8.4e-141 505.0 637 49.0
Gorai.010G134600 Gossypium raimondii HOM05D006715 ORTHO05D008345 5.4e-140 502.3 643 46.2
Sed0009104 Sechium edule HOM05D006715 ORTHO05D008345 2.1e-139 500.4 665 44.8
VMungo0464G1764 Vigna mungo HOM05D006715 ORTHO05D008345 3.5e-139 499.6 664 47.6
TAR381G1273 Trochodendron aralioides HOM05D006715 ORTHO05D008345 6.0e-139 498.8 696 44.0
Gohir.A06G112504 Gossypium hirsutum HOM05D006715 ORTHO05D008345 1.5e-137 494.2 650 45.5
Cpa.g.sc1027.1 Carica papaya HOM05D006715 ORTHO05D008345 1.9e-137 493.8 645 46.2
Sopen04g027550 Solanum pennellii HOM05D006715 ORTHO05D008345 6.2e-136 488.8 685 42.8
CAN.G1215.10 Capsicum annuum HOM05D006715 ORTHO05D008345 2.6e-134 483.4 664 42.8
Glyma.16G166500 Glycine max HOM05D006715 ORTHO05D008345 7.1e-132 475.3 648 46.1
Nitab4.5_0001187g0100 Nicotiana tabacum HOM05D006715 ORTHO05D008345 9.3e-132 474.9 667 43.3
COL.COLO4_29857 Corchorus olitorius HOM05D006715 ORTHO05D008345 6.0e-131 472.2 478 52.9
FAN27G2814 Fragaria x ananassa HOM05D006715 ORTHO05D008345 1.1e-129 468.0 537 50.5
TPR.G23114 Trifolium pratense HOM05D006715 ORTHO05D008345 8.1e-128 461.8 471 53.1
GSVIVG01034549001 Vitis vinifera HOM05D006715 ORTHO05D008345 3.1e-127 459.9 496 51.8
Hund26691 Selenicereus undatus HOM05D006715 ORTHO05D008345 1.5e-126 457.6 673 42.5
Aqoxy5G00857 Aquilegia oxysepala HOM05D006715 ORTHO05D008345 2.0e-126 457.2 647 44.2
Eucgr.F02698 Eucalyptus grandis HOM05D006715 ORTHO05D008345 1.7e-125 454.1 674 42.9
PGR042G1662 Punica granatum HOM05D006715 ORTHO05D008345 2.4e-124 450.3 670 45.2
Rhsim05G0181200 Rhododendron simsii HOM05D006715 ORTHO05D008345 4.6e-123 446.0 540 46.9
Peaxi162Scf00599g00121 Petunia axillaris HOM05D006715 ORTHO05D008345 1.9e-121 440.7 645 42.6
THA.LOC104804670 Tarenaya hassleriana HOM05D006715 ORTHO05D008345 1.9e-121 440.7 649 40.8
Nn5g28769 Nelumbo nucifera HOM05D006715 ORTHO05D008345 7.4e-121 438.7 698 41.4
vmacro20039 Vaccinium macrocarpon HOM05D006715 ORTHO05D008345 1.6e-120 437.6 654 42.2
PSO675G4790 Papaver somniferum HOM05D006715 ORTHO05D008345 8.4e-117 425.2 679 42.1
SGA_v2.0_scaffold25G11186 Striga asiatica HOM05D006715 ORTHO05D008345 7.1e-116 422.2 671 39.9
Lsat_1_v5_gn_9_41180 Lactuca sativa HOM05D006715 ORTHO05D008345 2.1e-115 420.6 653 41.0
CsaV3_6G002600 Cucumis sativus L. HOM05D006715 ORTHO05D008345 1.0e-114 418.3 551 46.1
Sp1g32410 Schrenkiella parvula HOM05D006715 ORTHO05D008345 6.0e-107 392.5 632 39.9
ECA232G1953 Erigeron canadensis HOM05D006715 ORTHO05D008345 1.8e-106 391.0 636 41.7
Migut.N03207 Erythranthe guttata HOM05D006715 ORTHO05D008345 9.0e-103 378.6 669 39.3
Thhalv10003905m.g Eutrema salsugineum HOM05D006715 ORTHO05D008345 9.0e-103 378.6 636 39.0
MSTRG.24217 Avicennia marina HOM05D006715 ORTHO05D008345 2.2e-101 374.0 730 35.5
DCAR_010095 Daucus carota HOM05D006715 ORTHO05D008345 1.1e-100 371.7 458 45.6
AL1G51600 Arabidopsis lyrata HOM05D006715 ORTHO05D008345 1.2e-99 368.2 624 38.3
HanXRQChr11g0320291 Helianthus annuus HOM05D006715 ORTHO05D008345 5.7e-97 359.4 640 41.4
AT1G43245 Arabidopsis thaliana HOM05D006715 ORTHO05D008345 6.3e-96 355.9 621 37.0
EL10Ac1g01568 Beta vulgaris HOM05D006715 ORTHO05D008345 1.3e-93 348.2 633 37.6
BcaB01g02294 Brassica carinata HOM05D006715 ORTHO05D008345 2.2e-93 347.4 626 37.4
Ca_26954_v3 Cicer arietinum L. HOM05D006715 ORTHO05D008345 1.1e-92 345.1 507 45.0
PGSC0003DMG400024094 Solanum tuberosum HOM05D006715 ORTHO05D008345 5.5e-92 342.8 389 46.0
Aa31LG6G9940 Aethionema arabicum HOM05D006715 ORTHO05D008345 2.7e-91 340.5 669 35.6
Gohir.D06G116900 Gossypium hirsutum HOM05D006715 ORTHO05D008345 4.7e-91 339.7 474 44.9
BcaC04g24108 Brassica carinata HOM05D006715 ORTHO05D008345 2.3e-90 337.4 621 37.8
unitig_21.g20147 Utricularia gibba HOM05D006715 ORTHO05D008345 2.3e-90 337.4 664 36.1
CDE12G0089 Ceratophyllum demersum HOM05D006715 ORTHO05D008345 3.1e-87 327.0 647 35.4
Lalb_Chr01g0009561 Lupinus albus HOM05D006715 ORTHO05D008345 5.9e-86 322.8 312 56.4
BolC9t53031H Brassica oleracea HOM05D006715 ORTHO05D008345 6.7e-82 309.3 532 38.5
SalBow6G6609 Salvia bowleyana HOM05D006715 ORTHO05D008345 1.7e-80 304.7 653 35.1
Nitab4.5_0002764g0020 Nicotiana tabacum HOM05D006715 ORTHO05D008345 2.2e-80 304.3 365 45.8
SHI09071 Sapria himalayana HOM05D006715 ORTHO05D008345 2.2e-80 304.3 744 33.3
A09p00880 Brassica napus HOM05D006715 ORTHO05D008345 8.2e-80 302.4 528 37.9
C09p00980 Brassica napus HOM05D006715 ORTHO05D008345 1.4e-79 301.6 527 38.3
AUR62026687 Chenopodium quinoa HOM05D006715 ORTHO05D008345 3.1e-79 300.4 338 49.4
Zm00001eb083170 Zea mays HOM05D006715 ORTHO05D008345 3.1e-79 300.4 660 33.9
Dinv41067 Davidia involucrata HOM05D006715 ORTHO05D008345 9.1e-79 298.9 337 51.0
BraA09t35760Z Brassica rapa HOM05D006715 ORTHO05D008345 1.2e-78 298.5 528 37.5
ATR0820G173 Amborella trichopoda HOM05D006715 ORTHO05D008345 1.7e-77 294.7 689 33.8
Os04g0423600 Oryza sativa ssp. japonica HOM05D006715 ORTHO05D008345 4.2e-76 290.0 660 31.5
CSS0020422 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 1.2e-73 282.0 255 58.0
Potri.005G193701 Populus trichocarpa HOM05D006715 ORTHO05D008345 2.5e-68 264.2 312 47.8
TAR381G1110 Trochodendron aralioides HOM05D006715 ORTHO05D008345 9.8e-65 252.3 315 45.7
AUR62040600 Chenopodium quinoa HOM05D006715 ORTHO05D008345 2.8e-64 250.8 313 46.0
Glyma.16G166333 Glycine max HOM05D006715 ORTHO05D008345 3.5e-62 243.8 269 50.6
CARHR035370 Cardamine hirsuta HOM05D006715 ORTHO05D008345 1.9e-60 238.0 411 39.4
Cc10_g14930 Coffea canephora HOM05D006715 ORTHO05D008345 2.5e-60 237.7 337 43.3
Lj2g0026984 Lotus japonicus HOM05D006715 ORTHO05D008345 7.5e-57 226.1 199 61.3
Carub.0001s3453 Capsella rubella HOM05D006715 ORTHO05D008345 1.2e-49 202.2 357 37.0
CSS0028068 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 4.9e-48 196.8 256 46.9
Lalb_Chr01g0009551 Lupinus albus HOM05D006715 ORTHO05D008345 6.0e-46 189.9 314 41.1
Sc02g0003950 Simmondsia chinensis HOM05D006715 ORTHO05D008345 1.7e-45 188.3 203 47.3
MBI17_g41095_MAGBIO Magnolia biondii HOM05D006715 ORTHO05D008345 2.3e-45 188.0 351 38.2
Glyma.16G166267 Glycine max HOM05D006715 ORTHO05D008345 4.1e-39 167.2 177 54.2
HPP92_009297 Vanilla planifolia HOM05D006715 ORTHO05D008345 6.0e-38 163.3 280 36.4
SEGI_34185 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 2.5e-36 157.9 458 27.1
HPP92_009296 Vanilla planifolia HOM05D006715 ORTHO05D008345 1.6e-35 155.2 361 34.3
SEGI_11470 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 8.1e-35 152.9 366 32.5
QL02p038810 Quercus lobata HOM05D006715 ORTHO05D008345 2.6e-33 147.9 367 33.2
Oeu031098.1 Olea europaea HOM05D006715 ORTHO05D008345 8.6e-29 132.9 370 30.8
Gohir.1Z049355 Gossypium hirsutum HOM05D006715 ORTHO05D008345 7.3e-28 129.8 135 51.9
Carub.0001s3454 Capsella rubella HOM05D006715 ORTHO05D008345 8.1e-27 126.3 200 39.5
Medtr3g062560 Medicago truncatula HOM05D006715 ORTHO05D008345 2.9e-16 91.3 186 37.1
CSS0046539 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 1.9e-15 88.6 116 45.7
SEGI_20433 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 2.1e-14 85.1 244 33.6
TAR381G0879 Trochodendron aralioides HOM05D006715 ORTHO05D008345 2.4e-10 71.6 169 30.8
arahy.Tifrunner.gnm1.ann1.12T13Y Arachis hypogaea HOM05D006715 ORTHO05D008345 3.8e-08 64.3 66 50.0
SEGI_02927 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 1.4e-07 62.4 266 25.2
MCO04G092 Micromonas commoda HOM05D004492 ORTHO05D005602 9.3e-07 59.7 305 24.9
CSS0011701 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 3.5e-06 57.8 32 75.0
PRCOL_00006858 Prasinoderma coloniale HOM05D004492 ORTHO05D005602 3.5e-06 57.8 112 26.8
Mapoly0101s0047 Marchantia polymorpha HOM05D004492 ORTHO05D005602 7.9e-06 56.6 180 26.1


User provided reference genes

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