Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p011993 Quercus lobata HOM05D015404 ORTHO05D011570 2.2e-85 318.9 161 100.0
Cfa016331 Carpinus fangiana HOM05D015404 ORTHO05D011570 9.3e-44 180.6 159 57.9
CiPaw.08G129800 Carya illinoinensis HOM05D015404 ORTHO05D011570 1.9e-41 172.9 171 57.3
CiPaw.05G259800 Carya illinoinensis HOM05D015404 ORTHO05D011570 4.3e-41 171.8 156 55.8
Haze_16765 Corylus avellana HOM05D015404 ORTHO05D011570 5.5e-28 128.3 92 63.0
RcHm_v2.0_Chr1g0379631 Rosa chinensis HOM05D015404 ORTHO05D011570 5.3e-23 111.7 104 53.8
Thecc.03G188800 Theobroma cacao HOM05D015404 ORTHO05D010031 1.5e-17 93.6 101 45.5
Sed0013435 Sechium edule HOM05D010021 ORTHO05D011570 1.5e-14 83.6 172 33.7
Sed0001122 Sechium edule HOM05D010021 ORTHO05D011570 3.4e-14 82.4 172 33.7
Manes.16G117600 Manihot esculenta HOM05D017842 ORTHO05D020741 7.7e-14 81.3 152 34.9
Gohir.D12G254800 Gossypium hirsutum HOM05D015404 ORTHO05D011570 3.8e-13 79.0 103 38.8
Sed0010999 Sechium edule HOM05D010021 ORTHO05D011570 1.4e-12 77.0 150 35.3
Sed0014190 Sechium edule HOM05D010021 ORTHO05D011570 4.7e-11 72.0 143 32.2
CiPaw.12G087400 Carya illinoinensis HOM05D010605 ORTHO05D010031 8.0e-11 71.2 163 31.3
Sopen08g021610 Solanum pennellii HOM05D031006 ORTHO05D030675 1.0e-10 70.9 224 25.9
ClCG00G003470 Citrullus lanatus HOM05D010021 ORTHO05D011570 1.4e-10 70.5 162 30.9
ClCG01G000740 Citrullus lanatus HOM05D010021 ORTHO05D011570 1.4e-10 70.5 162 30.9
FAN06G0580 Fragaria x ananassa HOM05D017842 ORTHO05D020741 1.4e-10 70.5 148 30.4
Haze_08723 Corylus avellana HOM05D010605 ORTHO05D010031 2.3e-10 69.7 168 28.0
Haze_08725 Corylus avellana HOM05D010605 ORTHO05D010031 2.3e-10 69.7 168 28.0
CiPaw.11G127100 Carya illinoinensis HOM05D010605 ORTHO05D010031 3.9e-10 68.9 150 29.3
Sed0027503 Sechium edule HOM05D010021 ORTHO05D011570 5.2e-10 68.6 168 30.4
MELO3C005853.2 Cucumis melo HOM05D010021 ORTHO05D011570 6.7e-10 68.2 163 31.9
Sed0026961 Sechium edule HOM05D010021 ORTHO05D011570 1.5e-09 67.0 162 30.9
Sed0006704 Sechium edule HOM05D010021 ORTHO05D011570 2.6e-09 66.2 162 30.9
MD08G1133000 Malus domestica HOM05D017842 ORTHO05D020741 3.3e-09 65.9 158 28.5
CiPaw.12G087500 Carya illinoinensis HOM05D010605 ORTHO05D010031 7.4e-09 64.7 163 28.8
Haze_08721 Corylus avellana HOM05D010605 ORTHO05D010031 9.7e-09 64.3 158 27.8
Prupe.1G469700 Prunus persica HOM05D017842 ORTHO05D020741 9.7e-09 64.3 154 26.6
CsaV3_5G028200 Cucumis sativus L. HOM05D010021 ORTHO05D011570 1.3e-08 63.9 158 28.5
Sed0010589 Sechium edule HOM05D010021 ORTHO05D011570 1.7e-08 63.5 100 36.0
Sed0021961 Sechium edule HOM05D010021 ORTHO05D011570 2.2e-08 63.2 101 36.6
QL02p032625 Quercus lobata HOM05D010605 ORTHO05D010031 2.8e-08 62.8 157 28.7
Cfa012265 Carpinus fangiana HOM05D010605 ORTHO05D010031 3.7e-08 62.4 170 26.5
Dinv08500 Davidia involucrata HOM05D010605 ORTHO05D010031 4.8e-08 62.0 141 29.8
Dinv37573 Davidia involucrata HOM05D010605 ORTHO05D010031 4.8e-08 62.0 159 29.6
Hma1.2p1_0216F.1_g091240 Hydrangea macrophylla HOM05D010605 ORTHO05D010031 4.8e-08 62.0 166 27.7
CsaV3_5G000880 Cucumis sativus L. HOM05D010021 ORTHO05D011570 6.3e-08 61.6 163 32.5
CsaV3_5G000890 Cucumis sativus L. HOM05D010021 ORTHO05D011570 8.2e-08 61.2 97 42.3
Sed0003977 Sechium edule HOM05D010021 ORTHO05D011570 1.4e-07 60.5 102 38.2
MD15G1111500 Malus domestica HOM05D017842 ORTHO05D020741 3.1e-07 59.3 151 28.5
Sed0008001 Sechium edule HOM05D010021 ORTHO05D011570 3.1e-07 59.3 99 37.4
Haze_08724 Corylus avellana HOM05D010605 ORTHO05D010031 4.1e-07 58.9 173 26.6
Haze_08727 Corylus avellana HOM05D010605 ORTHO05D010031 4.1e-07 58.9 173 26.6
CiPaw.11G127200 Carya illinoinensis HOM05D010605 ORTHO05D010031 5.3e-07 58.5 144 27.1
ClCG01G000770 Citrullus lanatus HOM05D010021 ORTHO05D011570 7.0e-07 58.2 180 27.2
MELO3C005854.2 Cucumis melo HOM05D010021 ORTHO05D011570 7.0e-07 58.2 97 39.2
ClCG01G000750 Citrullus lanatus HOM05D010021 ORTHO05D011570 1.6e-06 57.0 96 34.4
Actinidia28329 Actinidia chinensis HOM05D010605 ORTHO05D010031 2.0e-06 56.6 88 33.0


User provided reference genes

Program Settings