Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p008099 Quercus lobata HOM05D000141 ORTHO05D337517 1.1e-118 430.3 263 100.0
MD10G1311800 Malus domestica HOM05D000141 ORTHO05D001968 1.6e-08 64.3 244 28.7
CiPaw.09G080400 Carya illinoinensis HOM05D000141 ORTHO05D001968 2.1e-08 63.9 259 28.2
HanXRQChr11g0333041 Helianthus annuus HOM05D000141 ORTHO05D001968 3.5e-08 63.2 251 27.9
TPR.G32663 Trifolium pratense HOM05D000141 ORTHO05D001968 3.5e-08 63.2 235 30.2
arahy.Tifrunner.gnm1.ann1.YUGY0X Arachis hypogaea HOM05D000141 ORTHO05D001968 4.6e-08 62.8 210 30.0
CANSAT56G1430 Cannabis sativa HOM05D000141 ORTHO05D001968 4.6e-08 62.8 238 27.3
HanXRQChr13g0407651 Helianthus annuus HOM05D000141 ORTHO05D001968 4.6e-08 62.8 250 27.6
Lj1C862T8 Lonicera japonica HOM05D000141 ORTHO05D001968 6.0e-08 62.4 237 28.3
Psat1g211320 Pisum sativum HOM05D000141 ORTHO05D001968 7.9e-08 62.0 231 29.9
Prupe.4G029200 Prunus persica HOM05D000141 ORTHO05D001968 7.9e-08 62.0 242 27.3
TWI38G1655 Tripterygium wilfordii HOM05D000141 ORTHO05D001968 7.9e-08 62.0 169 33.1
Sabra11G0018700 Salix brachista HOM05D000141 ORTHO05D001968 1.0e-07 61.6 233 28.8
Sabra11G0024600 Salix brachista HOM05D000141 ORTHO05D001968 1.0e-07 61.6 233 28.8
CDE02G2444 Ceratophyllum demersum HOM05D000141 ORTHO05D001968 1.3e-07 61.2 218 28.9
CDE05G0461 Ceratophyllum demersum HOM05D000141 ORTHO05D001968 1.3e-07 61.2 227 28.6
Sabra04G0017900 Salix brachista HOM05D000141 ORTHO05D001968 1.3e-07 61.2 233 28.8
CSS0022316 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D001968 1.8e-07 60.8 233 28.3
CSS0030624 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D001968 1.8e-07 60.8 233 28.3
HanXRQChr15g0495691 Helianthus annuus HOM05D000141 ORTHO05D001968 1.8e-07 60.8 252 26.6
Dinv22314 Davidia involucrata HOM05D000141 ORTHO05D001968 2.3e-07 60.5 237 28.7
Medtr2g010760 Medicago truncatula HOM05D000141 ORTHO05D001968 2.3e-07 60.5 227 29.1
Potri.011G031200 Populus trichocarpa HOM05D000141 ORTHO05D001968 2.3e-07 60.5 233 28.3
Medtr4g092140 Medicago truncatula HOM05D000141 ORTHO05D001968 3.0e-07 60.1 157 31.8
Potri.001G416300 Populus trichocarpa HOM05D000141 ORTHO05D001968 3.0e-07 60.1 233 28.3
Potri.011G131900 Populus trichocarpa HOM05D000141 ORTHO05D001968 3.0e-07 60.1 233 28.3
QL05p077145 Quercus lobata HOM05D000141 ORTHO05D001968 3.0e-07 60.1 253 27.7
QL93p0073_1235 Quercus lobata HOM05D000141 ORTHO05D001968 3.0e-07 60.1 253 27.7
Sed0021398 Sechium edule HOM05D000141 ORTHO05D001968 3.0e-07 60.1 238 29.0
Ca_00206_v3 Cicer arietinum L. HOM05D000141 ORTHO05D001968 3.9e-07 59.7 231 28.6
Lsat_1_v5_gn_0_6961 Lactuca sativa HOM05D007317 ORTHO05D001968 3.9e-07 59.7 215 30.2
Lsat_1_v5_gn_7_108240 Lactuca sativa HOM05D000141 ORTHO05D001968 3.9e-07 59.7 251 26.7
MELO3C002509.2 Cucumis melo HOM05D000141 ORTHO05D001968 5.1e-07 59.3 243 28.4
Potri.004G031600 Populus trichocarpa HOM05D000141 ORTHO05D001968 5.1e-07 59.3 233 28.3
CiPaw.10G066600 Carya illinoinensis HOM05D000141 ORTHO05D001968 6.7e-07 58.9 238 27.3
Haze_06688 Corylus avellana HOM05D000141 ORTHO05D001968 6.7e-07 58.9 243 28.0
CsaV3_1G011320 Cucumis sativus L. HOM05D000141 ORTHO05D001968 6.7e-07 58.9 243 28.4
Dinv18940 Davidia involucrata HOM05D000141 ORTHO05D001968 6.7e-07 58.9 180 32.2
TPR.G13913 Trifolium pratense HOM05D000141 ORTHO05D001968 6.7e-07 58.9 157 31.8
TAR629G2130 Trochodendron aralioides HOM05D000141 ORTHO05D001968 6.7e-07 58.9 186 30.6
Dinv17848 Davidia involucrata HOM05D000141 ORTHO05D001968 8.7e-07 58.5 180 31.7
Duzib235G0067 Durio zibethinus HOM05D000141 ORTHO05D001968 8.7e-07 58.5 244 27.9
Cfa016410 Carpinus fangiana HOM05D000141 ORTHO05D001968 1.1e-06 58.2 243 27.6
Thecc.06G208600 Theobroma cacao HOM05D000141 ORTHO05D001968 1.1e-06 58.2 244 28.7
arahy.Tifrunner.gnm1.ann1.QWU62Y Arachis hypogaea HOM05D000141 ORTHO05D001968 1.5e-06 57.8 240 28.3
Ca_18447_v3 Cicer arietinum L. HOM05D000141 ORTHO05D001968 1.5e-06 57.8 157 30.6
Duzib213G0308 Durio zibethinus HOM05D000141 ORTHO05D001968 1.5e-06 57.8 234 28.2
Gohir.A05G167600 Gossypium hirsutum HOM05D000141 ORTHO05D001968 1.5e-06 57.8 238 27.3
HanXRQChr03g0076311 Helianthus annuus HOM05D000141 ORTHO05D001968 1.5e-06 57.8 231 26.8
HanXRQChr11g0328001 Helianthus annuus HOM05D000141 ORTHO05D001968 1.5e-06 57.8 231 26.8
Hma1.2p1_1682F.1_g297330 Hydrangea macrophylla HOM05D000141 ORTHO05D001968 1.5e-06 57.8 163 33.1
Prupe.4G201200 Prunus persica HOM05D000141 ORTHO05D001968 1.5e-06 57.8 252 27.0
CiPaw.12G125900 Carya illinoinensis HOM05D000141 ORTHO05D001968 1.9e-06 57.4 233 27.5
Dinv03943 Davidia involucrata HOM05D000141 ORTHO05D001968 1.9e-06 57.4 237 27.8
PSO210G7308 Papaver somniferum HOM05D000141 ORTHO05D001968 2.5e-06 57.0 233 28.8
PSO832G1105 Papaver somniferum HOM05D000141 ORTHO05D001968 2.5e-06 57.0 233 28.8
Psat7g105400 Pisum sativum HOM05D000141 ORTHO05D001968 2.5e-06 57.0 157 30.6
Sabra16G0283000 Salix brachista HOM05D000141 ORTHO05D001968 2.5e-06 57.0 233 27.5
Aqoxy6G00164 Aquilegia oxysepala HOM05D000141 ORTHO05D001968 3.3e-06 56.6 233 27.9
BraA01t01787Z Brassica rapa HOM05D000141 ORTHO05D001968 3.3e-06 56.6 206 29.6
COL.COLO4_31687 Corchorus olitorius HOM05D000141 ORTHO05D001968 3.3e-06 56.6 239 28.0
DCAR_012724 Daucus carota HOM05D000141 ORTHO05D001968 3.3e-06 56.6 229 27.5
MD05G1336300 Malus domestica HOM05D000141 ORTHO05D001968 3.3e-06 56.6 243 26.3
Manes.16G017100 Manihot esculenta HOM05D000141 ORTHO05D001968 3.3e-06 56.6 231 26.8
Nn1g03714 Nelumbo nucifera HOM05D000141 ORTHO05D001968 3.3e-06 56.6 193 29.5
Atru.chr2.3181 Acer truncatum HOM05D000141 ORTHO05D001968 4.3e-06 56.2 233 27.0
Atru.chr2.3191 Acer truncatum HOM05D000141 ORTHO05D001968 4.3e-06 56.2 233 27.0
Aqoxy1G03803 Aquilegia oxysepala HOM05D000141 ORTHO05D001968 4.3e-06 56.2 230 27.8
AL8G30120 Arabidopsis lyrata HOM05D000141 ORTHO05D001968 4.3e-06 56.2 234 27.4
AT5G54670 Arabidopsis thaliana HOM05D000141 ORTHO05D001968 4.3e-06 56.2 234 27.4
MSTRG.6886 Avicennia marina HOM05D000141 ORTHO05D001968 4.3e-06 56.2 235 27.2
ClCG05G014830 Citrullus lanatus HOM05D000141 ORTHO05D001968 4.3e-06 56.2 242 27.7
Glyma.07G186700 Glycine max HOM05D000141 ORTHO05D001968 4.3e-06 56.2 233 26.6
Lj4g0020235 Lotus japonicus HOM05D000141 ORTHO05D001968 4.3e-06 56.2 171 29.8
Lalb_Chr20g0122651 Lupinus albus HOM05D000141 ORTHO05D001968 4.3e-06 56.2 167 32.3
Oeu007616.1 Olea europaea HOM05D000141 ORTHO05D001968 4.3e-06 56.2 235 27.7
Oeu062622.1 Olea europaea HOM05D000141 ORTHO05D001968 4.3e-06 56.2 235 27.2
Peaxi162Scf00000g00841 Petunia axillaris HOM05D000141 ORTHO05D001968 4.3e-06 56.2 236 26.3
Thecc.07G055200 Theobroma cacao HOM05D000141 ORTHO05D001968 4.3e-06 56.2 234 27.8
TWI63G0112 Tripterygium wilfordii HOM05D000141 ORTHO05D001968 4.3e-06 56.2 169 31.4
Zm00001eb298280 Zea mays HOM05D000141 ORTHO05D001968 4.3e-06 56.2 231 27.7
CSS0042879 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D001968 5.6e-06 55.8 243 28.4
CANSAT11G0716 Cannabis sativa HOM05D000141 ORTHO05D001968 5.6e-06 55.8 237 27.8
FvH4_3g02912 Fragaria vesca HOM05D000141 ORTHO05D001968 5.6e-06 55.8 242 26.4
FAN25G0440 Fragaria x ananassa HOM05D000141 ORTHO05D001968 5.6e-06 55.8 242 26.4
Gohir.D10G016700 Gossypium hirsutum HOM05D000141 ORTHO05D001968 5.6e-06 55.8 238 26.5
Gorai.011G018600 Gossypium raimondii HOM05D000141 ORTHO05D001968 5.6e-06 55.8 238 26.5
Lalb_Chr16g0383241 Lupinus albus HOM05D000141 ORTHO05D001968 5.6e-06 55.8 179 29.6
Sp6g16630 Schrenkiella parvula HOM05D000141 ORTHO05D001968 5.6e-06 55.8 234 26.9
GSVIVG01007336001 Vitis vinifera HOM05D000141 ORTHO05D001968 5.6e-06 55.8 227 28.6
EL10Ac4g07989 Beta vulgaris HOM05D000141 ORTHO05D001968 7.4e-06 55.5 233 27.0
CSS0038905 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D001968 7.4e-06 55.5 238 28.6
CAN.G337.155 Capsicum annuum HOM05D000141 ORTHO05D001968 7.4e-06 55.5 231 27.3
CiPaw.11G182900 Carya illinoinensis HOM05D000141 ORTHO05D001968 7.4e-06 55.5 239 28.0
Cc05_g13160 Coffea canephora HOM05D000141 ORTHO05D001968 7.4e-06 55.5 227 26.9
Hund02142 Selenicereus undatus HOM05D000141 ORTHO05D001968 7.4e-06 55.5 233 27.0
THA.LOC104812529 Tarenaya hassleriana HOM05D000141 ORTHO05D001968 7.4e-06 55.5 237 27.8
Aa31LG9G9250 Aethionema arabicum HOM05D000141 ORTHO05D001968 9.6e-06 55.1 242 27.7
CARHR252360 Cardamine hirsuta HOM05D000141 ORTHO05D001968 9.6e-06 55.1 171 31.0
CARHR267980 Cardamine hirsuta HOM05D000141 ORTHO05D001968 9.6e-06 55.1 234 26.9
AUR62015634 Chenopodium quinoa HOM05D000141 ORTHO05D001968 9.6e-06 55.1 233 26.6
AUR62029238 Chenopodium quinoa HOM05D000141 ORTHO05D001968 9.6e-06 55.1 233 26.6
Haze_09592 Corylus avellana HOM05D000141 ORTHO05D001968 9.6e-06 55.1 239 26.4
MELO3C018132.2 Cucumis melo HOM05D000141 ORTHO05D001968 9.6e-06 55.1 242 27.3
CsaV3_3G022850 Cucumis sativus L. HOM05D000141 ORTHO05D001968 9.6e-06 55.1 242 27.3
Gohir.A04G022500 Gossypium hirsutum HOM05D000141 ORTHO05D001968 9.6e-06 55.1 247 25.9
Gohir.A10G016600 Gossypium hirsutum HOM05D000141 ORTHO05D001968 9.6e-06 55.1 238 26.5
TWI38G0999 Tripterygium wilfordii HOM05D000141 ORTHO05D001968 9.6e-06 55.1 233 26.6
unitig_52.g17359 Utricularia gibba HOM05D000141 ORTHO05D001968 9.6e-06 55.1 228 27.2
VMungo0331G1767 Vigna mungo HOM05D000141 ORTHO05D001968 9.6e-06 55.1 233 27.5


User provided reference genes

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