Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p007748 Quercus lobata HOM05D006582 ORTHO05D008313 2.6e-159 565.5 308 100.0
Cfa016201 Carpinus fangiana HOM05D006582 ORTHO05D008313 4.7e-137 491.5 308 84.4
Haze_00249 Corylus avellana HOM05D006582 ORTHO05D008313 3.0e-131 472.2 336 77.4
Haze_00255 Corylus avellana HOM05D006582 ORTHO05D008313 3.0e-131 472.2 336 77.4
CiPaw.06G044200 Carya illinoinensis HOM05D006582 ORTHO05D008313 2.5e-130 469.2 308 80.2
GSVIVG01038593001 Vitis vinifera HOM05D006582 ORTHO05D008313 8.9e-128 460.7 308 76.3
Dinv29249 Davidia involucrata HOM05D006582 ORTHO05D008313 4.9e-126 454.9 308 76.6
Prupe.2G171600 Prunus persica HOM05D006582 ORTHO05D008313 1.9e-125 453.0 308 76.3
CsaV3_5G000310 Cucumis sativus L. HOM05D006582 ORTHO05D008313 2.4e-125 452.6 308 77.6
RcHm_v2.0_Chr1g0355871 Rosa chinensis HOM05D006582 ORTHO05D008313 9.2e-125 450.7 308 76.3
Sed0002968 Sechium edule HOM05D006582 ORTHO05D008313 9.2e-125 450.7 308 77.3
MELO3C005901.2 Cucumis melo HOM05D006582 ORTHO05D008313 1.6e-124 449.9 308 77.6
Rhsim03G0211600 Rhododendron simsii HOM05D006582 ORTHO05D008313 6.0e-124 448.0 308 74.4
Hma1.2p1_0415F.1_g148010 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 7.8e-124 447.6 308 74.4
FAN03G0584 Fragaria x ananassa HOM05D006582 ORTHO05D008313 1.3e-123 446.8 308 76.0
FAN06G3963 Fragaria x ananassa HOM05D006582 ORTHO05D008313 1.3e-123 446.8 308 75.6
Actinidia34241 Actinidia chinensis HOM05D006582 ORTHO05D008313 1.7e-123 446.4 308 75.0
MD07G1135900 Malus domestica HOM05D006582 ORTHO05D008313 1.7e-123 446.4 308 76.3
FvH4_7g14460 Fragaria vesca HOM05D006582 ORTHO05D008313 2.3e-123 446.0 308 75.6
FAN06G2233 Fragaria x ananassa HOM05D006582 ORTHO05D008313 2.3e-123 446.0 308 75.6
CSS0043436 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 8.6e-123 444.1 308 74.4
FAN01G0099 Fragaria x ananassa HOM05D006582 ORTHO05D008313 8.6e-123 444.1 308 75.3
CSS0003388 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 2.5e-122 442.6 308 74.0
CANSAT21G1996 Cannabis sativa HOM05D006582 ORTHO05D008313 4.3e-122 441.8 308 75.0
Lj3A900T44 Lonicera japonica HOM05D006582 ORTHO05D008313 4.3e-122 441.8 308 73.7
Thecc.03G203200 Theobroma cacao HOM05D006582 ORTHO05D008313 1.6e-121 439.9 312 79.2
Sabra15G0024300 Salix brachista HOM05D006582 ORTHO05D008313 3.6e-121 438.7 309 73.8
Gohir.D08G113800 Gossypium hirsutum HOM05D006582 ORTHO05D008313 4.7e-121 438.3 312 78.2
PGR142G1628 Punica granatum HOM05D006582 ORTHO05D008313 6.2e-121 438.0 308 73.4
Gorai.004G122700 Gossypium raimondii HOM05D006582 ORTHO05D008313 1.1e-120 437.2 274 81.8
TAR374G0762 Trochodendron aralioides HOM05D006582 ORTHO05D008313 1.1e-120 437.2 308 73.1
Migut.F00182 Erythranthe guttata HOM05D006582 ORTHO05D008313 1.4e-120 436.8 308 73.7
THA.LOC104811904 Tarenaya hassleriana HOM05D006582 ORTHO05D008313 1.4e-120 436.8 308 72.1
SGA_v2.0_scaffold18G08434 Striga asiatica HOM05D006582 ORTHO05D008313 1.2e-119 433.7 308 73.4
TWI60G0746 Tripterygium wilfordii HOM05D006582 ORTHO05D008313 2.6e-119 432.6 314 73.6
Manes.01G148600 Manihot esculenta HOM05D006582 ORTHO05D008313 7.6e-119 431.0 308 73.7
Duzib068G0295 Durio zibethinus HOM05D006582 ORTHO05D008313 9.9e-119 430.6 312 74.0
Ciclev10021376m.g Citrus clementina HOM05D006582 ORTHO05D008313 1.3e-118 430.3 309 73.1
COL.COLO4_16812 Corchorus olitorius HOM05D006582 ORTHO05D008313 2.2e-118 429.5 312 73.1
Cc04_g16300 Coffea canephora HOM05D006582 ORTHO05D008313 6.4e-118 427.9 308 73.1
arahy.Tifrunner.gnm1.ann1.AV4C6H Arachis hypogaea HOM05D006582 ORTHO05D008313 8.4e-118 427.6 311 73.3
arahy.Tifrunner.gnm1.ann1.D33ADG Arachis hypogaea HOM05D006582 ORTHO05D008313 8.4e-118 427.6 311 73.3
Lsat_1_v5_gn_2_135281 Lactuca sativa HOM05D006582 ORTHO05D008313 2.4e-117 426.0 308 72.7
SalBow4G1606 Salvia bowleyana HOM05D006582 ORTHO05D008313 3.2e-117 425.6 308 71.1
Ah.07g205040 Amaranthus hybridus HOM05D006582 ORTHO05D008313 4.1e-117 425.2 273 78.4
Nn6g34389 Nelumbo nucifera HOM05D006582 ORTHO05D008313 9.2e-117 424.1 309 71.8
Glyma.11G108800 Glycine max HOM05D006582 ORTHO05D008313 1.6e-116 423.3 315 71.4
unitig_747.g21740 Utricularia gibba HOM05D006582 ORTHO05D008313 2.7e-116 422.5 308 71.4
Aa31LG3G9690 Aethionema arabicum HOM05D006582 ORTHO05D008313 6.0e-116 421.4 308 70.5
Phvul.011G018800 Phaseolus vulgaris HOM05D006582 ORTHO05D008313 6.0e-116 421.4 312 72.8
Sopen03g022560 Solanum pennellii HOM05D006582 ORTHO05D008313 6.0e-116 421.4 308 71.1
Peaxi162Scf00740g00331 Petunia axillaris HOM05D006582 ORTHO05D008313 7.8e-116 421.0 272 79.4
EL10Ac3g05224 Beta vulgaris HOM05D006582 ORTHO05D008313 1.0e-115 420.6 273 77.3
AUR62035580 Chenopodium quinoa HOM05D006582 ORTHO05D008313 1.0e-115 420.6 273 77.3
AUR62006048 Chenopodium quinoa HOM05D006582 ORTHO05D008313 1.7e-115 419.9 271 77.5
Ca_18952_v3 Cicer arietinum L. HOM05D006582 ORTHO05D008313 1.7e-115 419.9 312 71.5
Lj3g0025694 Lotus japonicus HOM05D006582 ORTHO05D008313 3.9e-115 418.7 313 71.6
PGSC0003DMG402018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 5.1e-115 418.3 308 71.1
CAN.G481.47 Capsicum annuum HOM05D006582 ORTHO05D008313 1.1e-114 417.2 308 72.1
Aqoxy7G00041 Aquilegia oxysepala HOM05D006582 ORTHO05D008313 1.5e-114 416.8 308 70.8
Solyc03g082820.3 Solanum lycopersicum HOM05D006582 ORTHO05D008313 2.5e-114 416.0 308 70.1
Medtr4g078140 Medicago truncatula HOM05D006582 ORTHO05D008313 5.6e-114 414.8 312 69.9
Sp7g25720 Schrenkiella parvula HOM05D006582 ORTHO05D008313 7.3e-114 414.5 308 68.8
VMungo1127G0470 Vigna mungo HOM05D006582 ORTHO05D008313 1.2e-113 413.7 311 71.4
Thhalv10025816m.g Eutrema salsugineum HOM05D006582 ORTHO05D008313 1.6e-113 413.3 308 68.8
Hund11634 Selenicereus undatus HOM05D006582 ORTHO05D008313 1.6e-113 413.3 272 75.4
AT4G27750 Arabidopsis thaliana HOM05D006582 ORTHO05D008313 3.6e-113 412.1 308 68.2
TPR.G19615 Trifolium pratense HOM05D006582 ORTHO05D008313 3.6e-113 412.1 312 69.2
Sc19g0000750 Simmondsia chinensis HOM05D006582 ORTHO05D008313 6.2e-113 411.4 273 75.5
BcaC09g50542 Brassica carinata HOM05D006582 ORTHO05D008313 8.1e-113 411.0 308 69.2
vmacro06405 Vaccinium macrocarpon HOM05D006582 ORTHO05D008313 8.1e-113 411.0 354 62.7
AL7G24900 Arabidopsis lyrata HOM05D006582 ORTHO05D008313 1.1e-112 410.6 308 68.2
BcaNung01623 Brassica carinata HOM05D006582 ORTHO05D008313 1.1e-112 410.6 311 68.8
A01p19210 Brassica napus HOM05D006582 ORTHO05D008313 1.1e-112 410.6 308 69.2
HanXRQChr07g0206401 Helianthus annuus HOM05D006582 ORTHO05D008313 1.4e-112 410.2 274 77.0
BraA01t01863Z Brassica rapa HOM05D006582 ORTHO05D008313 1.8e-112 409.8 308 69.2
Psat7g170040 Pisum sativum HOM05D006582 ORTHO05D008313 1.8e-112 409.8 313 69.0
C01p24110 Brassica napus HOM05D006582 ORTHO05D008313 3.1e-112 409.1 308 69.2
CARHR235480 Cardamine hirsuta HOM05D006582 ORTHO05D008313 4.0e-112 408.7 308 67.9
Carub.0007s1306 Capsella rubella HOM05D006582 ORTHO05D008313 6.9e-112 407.9 308 67.9
Lalb_Chr03g0024361 Lupinus albus HOM05D006582 ORTHO05D008313 7.6e-111 404.4 317 67.5
PSO782G4269 Papaver somniferum HOM05D006582 ORTHO05D008313 9.9e-111 404.1 307 67.8
Glyma.12G016600 Glycine max HOM05D006582 ORTHO05D008313 1.3e-110 403.7 313 70.3
MD01G1064000 Malus domestica HOM05D006582 ORTHO05D008313 1.4e-109 400.2 327 67.9
DCAR_008960 Daucus carota HOM05D006582 ORTHO05D008313 7.1e-109 397.9 272 75.7
BolC1t02368H Brassica oleracea HOM05D006582 ORTHO05D008313 1.6e-108 396.7 337 63.5
Hund21029 Selenicereus undatus HOM05D006582 ORTHO05D008313 6.9e-104 381.3 272 71.7
SGA_v2.0_scaffold44G16825 Striga asiatica HOM05D006582 ORTHO05D008313 6.9e-104 381.3 308 64.0
ECA238G3804 Erigeron canadensis HOM05D006582 ORTHO05D008313 9.0e-104 380.9 324 70.4
MBI04_g35986_MAGBIO Magnolia biondii HOM05D006582 ORTHO05D008313 7.1e-101 371.3 310 66.1
BcaNung01628 Brassica carinata HOM05D006582 ORTHO05D008313 3.9e-99 365.5 308 64.3
Nitab4.5_0002780g0150 Nicotiana tabacum HOM05D006582 ORTHO05D008313 6.9e-96 354.8 326 60.4
BcaNung01632 Brassica carinata HOM05D006582 ORTHO05D008313 1.2e-95 354.0 322 61.2
Nitab4.5_0007755g0010 Nicotiana tabacum HOM05D006582 ORTHO05D008313 4.2e-93 345.5 348 56.6
ATR0933G001 Amborella trichopoda HOM05D006582 ORTHO05D008313 7.9e-92 341.3 322 58.4
Os06g0129300 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 2.2e-86 323.2 272 62.5
Zm00001eb378450 Zea mays HOM05D006582 ORTHO05D008313 1.0e-83 314.3 273 60.1
Hma1.2p1_0415F.1_g148020 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 1.3e-83 313.9 234 69.7
Gohir.A08G102500 Gossypium hirsutum HOM05D006582 ORTHO05D008313 3.7e-81 305.8 238 70.2
Eucgr.K00407 Eucalyptus grandis HOM05D006582 ORTHO05D008313 2.4e-80 303.1 234 68.8
HPP92_007389 Vanilla planifolia HOM05D006582 ORTHO05D008313 7.7e-79 298.1 313 54.6
MD01G1064500 Malus domestica HOM05D006582 ORTHO05D008313 2.9e-78 296.2 203 77.3
MD01G1063600 Malus domestica HOM05D006582 ORTHO05D008313 4.3e-74 282.3 263 60.8
Potri.015G029300 Populus trichocarpa HOM05D006582 ORTHO05D008313 1.0e-70 271.2 210 69.5
CDE04G1908 Ceratophyllum demersum HOM05D006582 ORTHO05D008313 4.7e-68 262.3 308 48.4
Os10g0520900 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 7.2e-61 238.4 262 47.7
Zm00001eb021230 Zea mays HOM05D006582 ORTHO05D008313 7.2e-53 211.8 265 44.5
Cpa.g.sc3.116 Carica papaya HOM05D006582 ORTHO05D008313 2.7e-52 209.9 193 62.7
Mapoly0081s0017 Marchantia polymorpha HOM05D006582 ORTHO05D008313 3.5e-47 193.0 286 39.2
PGSC0003DMG401018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 2.2e-46 190.3 156 66.7
SMO356G0114 Selaginella moellendorffii HOM05D001613 ORTHO05D001556 3.8e-46 189.5 307 37.5
Pp3c14_24810 Physcomitrium patens HOM05D006582 ORTHO05D008313 4.8e-41 172.6 249 40.6
AagrBONN_evm.TU.Sc2ySwM_228.4673 Anthoceros agrestis HOM05D006582 ORTHO05D008313 3.3e-37 159.8 246 39.4
Hma1.2p1_0512F.1_g169380 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 3.6e-36 156.4 274 43.8
CiPaw.05G199600 Carya illinoinensis HOM05D006582 ORTHO05D008313 3.7e-33 146.4 117 68.4
Hma1.2p1_0415F.1_g148000 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 8.0e-28 128.6 87 75.9
CBR_g57838 Chara braunii HOM05D006582 ORTHO05D008313 4.0e-27 126.3 208 38.9
SHI19113 Sapria himalayana HOM05D006582 ORTHO05D008313 7.3e-21 105.5 74 70.3
SHI19111 Sapria himalayana HOM05D006582 ORTHO05D008313 3.2e-16 90.1 94 55.3
SEGI_26283 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 9.2e-16 88.6 78 59.0
Rhsim03G0115100 Rhododendron simsii HOM05D006582 ORTHO05D023108 3.1e-11 73.6 136 39.7
MD07G1135700 Malus domestica HOM05D006582 ORTHO05D008313 8.9e-11 72.0 79 57.0
SEGI_35321 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 1.1e-08 65.1 60 46.7


User provided reference genes

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