Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p007223 Quercus lobata HOM05D008618 ORTHO05D010393 1.1e-37 159.5 77 100.0
Haze_00293 Corylus avellana HOM05D008618 ORTHO05D010393 1.4e-21 105.9 74 66.2
CiPaw.02G048200 Carya illinoinensis HOM05D008618 ORTHO05D010393 3.8e-19 97.8 75 65.3
Dinv29214 Davidia involucrata HOM05D008618 ORTHO05D010393 8.5e-19 96.7 73 61.6
Cfa016164 Carpinus fangiana HOM05D008618 ORTHO05D010393 1.4e-18 95.9 74 66.2
Hma1.2p1_0094F.1_g047330 Hydrangea macrophylla HOM05D008618 ORTHO05D010393 5.5e-18 94.0 73 61.6
Hma1.2p1_0094F.1_g047336 Hydrangea macrophylla HOM05D008618 ORTHO05D010393 5.5e-18 94.0 73 61.6
CiPaw.06G041500 Carya illinoinensis HOM05D008618 ORTHO05D010393 2.1e-17 92.0 74 62.2
TAR623G0439 Trochodendron aralioides HOM05D008618 ORTHO05D010393 3.6e-17 91.3 77 58.4
TAR623G0113 Trochodendron aralioides HOM05D008618 ORTHO05D010393 7.9e-17 90.1 77 57.1
Rhsim03G0215100 Rhododendron simsii HOM05D008618 ORTHO05D010393 3.0e-16 88.2 73 57.5
vmacro06440 Vaccinium macrocarpon HOM05D008618 ORTHO05D010393 8.7e-16 86.7 73 57.5
FAN10G0741 Fragaria x ananassa HOM05D008618 ORTHO05D010393 5.7e-15 84.0 76 59.2
FAN10G2254 Fragaria x ananassa HOM05D008618 ORTHO05D010393 5.7e-15 84.0 76 59.2
Nn3g18880 Nelumbo nucifera HOM05D008618 ORTHO05D010393 7.4e-15 83.6 74 54.1
FvH4_7g32870 Fragaria vesca HOM05D008618 ORTHO05D010393 9.7e-15 83.2 76 59.2
TAR629G1218 Trochodendron aralioides HOM05D008618 ORTHO05D010393 9.7e-15 83.2 75 56.0
Manes.01G042900 Manihot esculenta HOM05D008618 ORTHO05D010393 6.3e-14 80.5 74 56.8
RcHm_v2.0_Chr1g0382821 Rosa chinensis HOM05D008618 ORTHO05D010393 6.3e-14 80.5 77 54.5
MD07G1298600 Malus domestica HOM05D008618 ORTHO05D010393 1.1e-13 79.7 69 56.5
Thecc.03G208200 Theobroma cacao HOM05D008618 ORTHO05D010393 1.4e-13 79.3 75 56.0
Sabra15G0003400 Salix brachista HOM05D008618 ORTHO05D010393 1.8e-13 79.0 75 56.0
Actinidia34266 Actinidia chinensis HOM05D008618 ORTHO05D010393 9.1e-13 76.6 77 53.2
Aqoxy7G00591 Aquilegia oxysepala HOM05D008618 ORTHO05D010393 1.5e-12 75.9 75 50.7
Potri.012G021500 Populus trichocarpa HOM05D008618 ORTHO05D010393 1.5e-12 75.9 75 54.7
Gohir.D12G247300 Gossypium hirsutum HOM05D008618 ORTHO05D010393 2.0e-12 75.5 75 53.3
Lalb_Chr11g0067381 Lupinus albus HOM05D008618 ORTHO05D010393 2.0e-12 75.5 73 47.9
Oeu061027.1 Olea europaea HOM05D008618 ORTHO05D010393 5.9e-12 73.9 75 52.0
VMungo1309G1433 Vigna mungo HOM05D008618 ORTHO05D010393 1.0e-11 73.2 73 50.7
Gohir.A12G246600 Gossypium hirsutum HOM05D008618 ORTHO05D010393 2.2e-11 72.0 75 52.0
Gorai.008G265300 Gossypium raimondii HOM05D008618 ORTHO05D010393 2.2e-11 72.0 75 52.0
MBI12_g34833_MAGBIO Magnolia biondii HOM05D008618 ORTHO05D010393 5.0e-11 70.9 76 44.7
MBI12_g02805_MAGBIO Magnolia biondii HOM05D008618 ORTHO05D010393 1.1e-10 69.7 76 44.7
Medtr3g092635 Medicago truncatula HOM05D008618 ORTHO05D010393 1.4e-10 69.3 73 49.3
TPR.G33651 Trifolium pratense HOM05D012788 ORTHO05D010393 1.9e-10 68.9 74 50.0
Phvul.009G045500 Phaseolus vulgaris HOM05D008618 ORTHO05D010393 2.5e-10 68.6 73 49.3
Psat5g072120 Pisum sativum HOM05D012788 ORTHO05D010393 2.5e-10 68.6 73 46.6
Glyma.06G136100 Glycine max HOM05D008618 ORTHO05D010393 3.2e-10 68.2 73 47.9
CSS0019591 Camellia sinensis var. sinensis HOM05D008618 ORTHO05D010393 5.5e-10 67.4 78 50.0
GSVIVG01038639001 Vitis vinifera HOM05D008618 ORTHO05D010393 9.4e-10 66.6 75 48.0
MBI12_g34834_MAGBIO Magnolia biondii HOM05D008618 ORTHO05D010393 2.1e-09 65.5 74 43.2
Glyma.04G228750 Glycine max HOM05D008618 ORTHO05D010393 2.7e-09 65.1 73 46.6
Gohir.D09G181766 Gossypium hirsutum HOM05D008618 ORTHO05D010393 1.0e-08 63.2 77 51.9
Gorai.006G203700 Gossypium raimondii HOM05D008618 ORTHO05D010393 1.0e-08 63.2 77 51.9
MBI12_g20135_MAGBIO Magnolia biondii HOM05D008618 ORTHO05D010393 1.4e-08 62.8 65 44.6
Gohir.A09G186833 Gossypium hirsutum HOM05D008618 ORTHO05D010393 1.8e-08 62.4 76 51.3
COL.COLO4_14366 Corchorus olitorius HOM05D008618 ORTHO05D010393 1.1e-07 59.7 75 48.0
arahy.Tifrunner.gnm1.ann1.4T36ZR Arachis hypogaea HOM05D012788 ORTHO05D010393 1.5e-07 59.3 76 40.8
arahy.Tifrunner.gnm1.ann1.5C4YCE Arachis hypogaea HOM05D012788 ORTHO05D010393 1.5e-07 59.3 76 40.8
arahy.Tifrunner.gnm1.ann1.87KBHK Arachis hypogaea HOM05D012788 ORTHO05D010393 1.5e-07 59.3 76 40.8
arahy.Tifrunner.gnm1.ann1.9LPP9E Arachis hypogaea HOM05D012788 ORTHO05D010393 1.5e-07 59.3 76 40.8
arahy.Tifrunner.gnm1.ann1.B8BFDM Arachis hypogaea HOM05D012788 ORTHO05D010393 1.5e-07 59.3 76 40.8
arahy.Tifrunner.gnm1.ann1.FHB2RT Arachis hypogaea HOM05D012788 ORTHO05D010393 1.5e-07 59.3 76 40.8
arahy.Tifrunner.gnm1.ann1.M7I6G5 Arachis hypogaea HOM05D012788 ORTHO05D010393 1.5e-07 59.3 76 40.8
arahy.Tifrunner.gnm1.ann1.PIR49E Arachis hypogaea HOM05D012788 ORTHO05D010393 1.5e-07 59.3 76 40.8
Potri.015G004900 Populus trichocarpa HOM05D008618 ORTHO05D010393 3.3e-07 58.2 41 68.3
Lj1g0016201 Lotus japonicus HOM05D012585 ORTHO05D015068 7.4e-07 57.0 64 48.4
SalBow2G1999 Salvia bowleyana HOM05D008618 ORTHO05D010393 7.4e-07 57.0 90 40.0
arahy.Tifrunner.gnm1.ann1.MVIT3T Arachis hypogaea HOM05D012788 ORTHO05D010393 2.2e-06 55.5 76 42.1
arahy.Tifrunner.gnm1.ann1.XTE2M1 Arachis hypogaea HOM05D012788 ORTHO05D010393 2.2e-06 55.5 76 38.2


User provided reference genes

Program Settings