Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p006037 Quercus lobata HOM05D000605 ORTHO05D338065 3.6e-67 258.1 127 100.0
Duzib205G1988 Durio zibethinus HOM05D000605 ORTHO05D001937 4.8e-11 71.6 77 51.9
Haze_00329 Corylus avellana HOM05D000605 ORTHO05D001937 2.4e-10 69.3 51 64.7
QL09p006063 Quercus lobata HOM05D000605 ORTHO05D001937 2.4e-10 69.3 55 61.8
Cfa016131 Carpinus fangiana HOM05D000605 ORTHO05D001937 5.3e-10 68.2 51 62.7
Potri.015G001300 Populus trichocarpa HOM05D000605 ORTHO05D001937 1.2e-09 67.0 51 62.7
Potri.015G001500 Populus trichocarpa HOM05D000605 ORTHO05D001937 1.2e-09 67.0 51 62.7
QL09p006051 Quercus lobata HOM05D000605 ORTHO05D001937 1.5e-09 66.6 51 62.7
Sabra15G0000800 Salix brachista HOM05D000605 ORTHO05D001937 1.5e-09 66.6 51 60.8
Ciclev10027188m.g Citrus clementina HOM05D000605 ORTHO05D001937 2.0e-09 66.2 64 54.7
Gohir.D12G245600 Gossypium hirsutum HOM05D000605 ORTHO05D001937 2.0e-09 66.2 66 54.5
Gorai.008G263200 Gossypium raimondii HOM05D000605 ORTHO05D001937 2.0e-09 66.2 66 54.5
Medtr5g068640 Medicago truncatula HOM05D000605 ORTHO05D001937 2.0e-09 66.2 51 56.9
Thecc.03G211700 Theobroma cacao HOM05D000605 ORTHO05D001937 2.0e-09 66.2 51 60.8
CiPaw.06G038700 Carya illinoinensis HOM05D000605 ORTHO05D001937 3.4e-09 65.5 51 62.7
Gohir.A12G244800 Gossypium hirsutum HOM05D000605 ORTHO05D001937 4.5e-09 65.1 66 53.0
QL09p006070 Quercus lobata HOM05D000605 ORTHO05D001937 4.5e-09 65.1 51 58.8
Gohir.A12G244600 Gossypium hirsutum HOM05D000605 ORTHO05D001937 5.9e-09 64.7 51 58.8
Gohir.D12G245500 Gossypium hirsutum HOM05D000605 ORTHO05D001937 5.9e-09 64.7 51 58.8
Gorai.008G263100 Gossypium raimondii HOM05D000605 ORTHO05D001937 5.9e-09 64.7 51 58.8
Manes.18G108100 Manihot esculenta HOM05D000605 ORTHO05D001937 5.9e-09 64.7 51 58.8
QL09p006057 Quercus lobata HOM05D000605 ORTHO05D001937 5.9e-09 64.7 51 56.9
Dinv17280 Davidia involucrata HOM05D000605 ORTHO05D001937 7.7e-09 64.3 51 56.9
Phvul.008G188300 Phaseolus vulgaris HOM05D000605 ORTHO05D001937 7.7e-09 64.3 51 58.8
Ca_05548_v3 Cicer arietinum L. HOM05D000605 ORTHO05D001937 1.0e-08 63.9 51 56.9
TAR629G2806 Trochodendron aralioides HOM05D000605 ORTHO05D001937 1.0e-08 63.9 56 50.0
Atru.chr12.2506 Acer truncatum HOM05D000605 ORTHO05D001937 1.7e-08 63.2 51 58.8
Atru.chr12.2529 Acer truncatum HOM05D000605 ORTHO05D001937 1.7e-08 63.2 51 58.8
MD07G1302800 Malus domestica HOM05D000605 ORTHO05D001937 1.7e-08 63.2 51 58.8
MD07G1303000 Malus domestica HOM05D000605 ORTHO05D001937 1.7e-08 63.2 51 58.8
TPR.G5796 Trifolium pratense HOM05D000605 ORTHO05D001937 1.7e-08 63.2 51 56.9
GSVIVG01034341001 Vitis vinifera HOM05D000605 ORTHO05D001937 1.7e-08 63.2 51 58.8
ClCG10G017390 Citrullus lanatus HOM05D000570 ORTHO05D005344 2.2e-08 62.8 53 54.7
COL.COLO4_14396 Corchorus olitorius HOM05D000605 ORTHO05D001937 2.2e-08 62.8 51 58.8
Duzib084G0207 Durio zibethinus HOM05D000605 ORTHO05D001937 2.2e-08 62.8 51 56.9
Glyma.14G188700 Glycine max HOM05D000605 ORTHO05D001937 2.2e-08 62.8 51 56.9
Eucgr.A00975 Eucalyptus grandis HOM05D000605 ORTHO05D001937 2.9e-08 62.4 51 56.9
Lsat_1_v5_gn_5_17281 Lactuca sativa HOM05D000605 ORTHO05D001937 2.9e-08 62.4 51 58.8
Lalb_Chr04g0252541 Lupinus albus HOM05D000605 ORTHO05D001937 2.9e-08 62.4 51 56.9
Nn1g00577 Nelumbo nucifera HOM05D000605 ORTHO05D001937 2.9e-08 62.4 51 56.9
PGR142G1793 Punica granatum HOM05D000605 ORTHO05D001937 2.9e-08 62.4 40 65.0
TWI39G1042 Tripterygium wilfordii HOM05D000605 ORTHO05D001937 2.9e-08 62.4 51 56.9
GSVIVG01034340001 Vitis vinifera HOM05D000605 ORTHO05D001937 2.9e-08 62.4 51 56.9
Gohir.A12G244900 Gossypium hirsutum HOM05D000605 ORTHO05D001937 3.8e-08 62.0 40 65.0
Oeu055418.1 Olea europaea HOM05D000605 ORTHO05D001937 3.8e-08 62.0 51 54.9
Psat2g060400 Pisum sativum HOM05D000605 ORTHO05D001937 3.8e-08 62.0 51 56.9
Psat7g096200 Pisum sativum HOM05D000605 ORTHO05D001937 3.8e-08 62.0 51 56.9
PGR142G0442 Punica granatum HOM05D000605 ORTHO05D001937 3.8e-08 62.0 51 54.9
CANSAT21G1518 Cannabis sativa HOM05D000605 ORTHO05D001937 5.0e-08 61.6 51 52.9
Eucgr.K00049 Eucalyptus grandis HOM05D000605 ORTHO05D001937 5.0e-08 61.6 51 54.9
Eucgr.K00459 Eucalyptus grandis HOM05D000605 ORTHO05D001937 5.0e-08 61.6 51 54.9
Gohir.D12G245700 Gossypium hirsutum HOM05D000605 ORTHO05D001937 5.0e-08 61.6 40 65.0
Gorai.008G263300 Gossypium raimondii HOM05D000605 ORTHO05D001937 5.0e-08 61.6 40 65.0
MD07G1302500 Malus domestica HOM05D000605 ORTHO05D001937 5.0e-08 61.6 51 58.8
TAR375G0168 Trochodendron aralioides HOM05D000605 ORTHO05D001937 5.0e-08 61.6 51 58.8
Eucgr.K00062 Eucalyptus grandis HOM05D000605 ORTHO05D001937 6.5e-08 61.2 51 54.9
Dinv29195 Davidia involucrata HOM05D000605 ORTHO05D001937 8.5e-08 60.8 51 56.9
Nitab4.5_0014534g0010 Nicotiana tabacum HOM05D000605 ORTHO05D001937 8.5e-08 60.8 51 56.9
Sed0007085 Sechium edule HOM05D000605 ORTHO05D001937 8.5e-08 60.8 51 56.9
CSS0038860 Camellia sinensis var. sinensis HOM05D000605 ORTHO05D001937 1.1e-07 60.5 51 52.9
Nitab4.5_0000021g0200 Nicotiana tabacum HOM05D000605 ORTHO05D001937 1.1e-07 60.5 51 56.9
Prupe.2G321700 Prunus persica HOM05D000605 ORTHO05D001937 1.1e-07 60.5 51 56.9
CANSAT21G2241 Cannabis sativa HOM05D000605 ORTHO05D001937 1.4e-07 60.1 51 52.9
Lalb_Chr10g0103001 Lupinus albus HOM05D000605 ORTHO05D001937 1.4e-07 60.1 51 54.9
Thecc.04G168800 Theobroma cacao HOM05D000605 ORTHO05D001937 1.4e-07 60.1 77 42.9
Actinidia28291 Actinidia chinensis HOM05D000605 ORTHO05D001937 1.9e-07 59.7 51 51.0
Rhsim03G0218200 Rhododendron simsii HOM05D000605 ORTHO05D001937 1.9e-07 59.7 51 54.9
vmacro06472 Vaccinium macrocarpon HOM05D000605 ORTHO05D001937 1.9e-07 59.7 51 54.9
CANSAT21G0522 Cannabis sativa HOM05D000605 ORTHO05D001937 2.5e-07 59.3 51 51.0
Glyma.02G221200 Glycine max HOM05D000605 ORTHO05D001937 2.5e-07 59.3 51 51.0
Solyc03g079980.2 Solanum lycopersicum HOM05D000605 ORTHO05D001937 2.5e-07 59.3 51 54.9
Solyc03g080000.1 Solanum lycopersicum HOM05D000605 ORTHO05D001937 2.5e-07 59.3 51 58.8
Sopen03g021720 Solanum pennellii HOM05D000605 ORTHO05D001937 2.5e-07 59.3 51 58.8
PGSC0003DMG400000549 Solanum tuberosum HOM05D000605 ORTHO05D001937 2.5e-07 59.3 51 56.9
CSS0009968 Camellia sinensis var. sinensis HOM05D000605 ORTHO05D001937 3.2e-07 58.9 51 49.0
CSS0028955 Camellia sinensis var. sinensis HOM05D000605 ORTHO05D001937 3.2e-07 58.9 51 49.0
Nn3g18747 Nelumbo nucifera HOM05D000605 ORTHO05D001937 3.2e-07 58.9 51 54.9
Sopen03g021710 Solanum pennellii HOM05D000605 ORTHO05D001937 3.2e-07 58.9 51 54.9
CsaV3_3G039000 Cucumis sativus L. HOM05D000605 ORTHO05D001937 4.2e-07 58.5 51 54.9
FvH4_7g33270 Fragaria vesca HOM05D000605 ORTHO05D001937 4.2e-07 58.5 51 56.9
FAN10G0696 Fragaria x ananassa HOM05D000605 ORTHO05D001937 4.2e-07 58.5 51 56.9
FAN10G1959 Fragaria x ananassa HOM05D000605 ORTHO05D001937 4.2e-07 58.5 51 56.9
MD07G1302700 Malus domestica HOM05D000605 ORTHO05D001937 4.2e-07 58.5 51 56.9
VMungo0647G2579 Vigna mungo HOM05D000605 ORTHO05D001937 4.2e-07 58.5 51 51.0
Actinidia08717 Actinidia chinensis HOM05D000605 ORTHO05D001937 5.5e-07 58.2 51 51.0
CANSAT21G1639 Cannabis sativa HOM05D000605 ORTHO05D001937 5.5e-07 58.2 51 49.0
CAN.G303.54 Capsicum annuum HOM05D000605 ORTHO05D001937 5.5e-07 58.2 51 56.9
CiPaw.05G208500 Carya illinoinensis HOM05D000605 ORTHO05D001937 5.5e-07 58.2 51 54.9
FAN01G2136 Fragaria x ananassa HOM05D000605 ORTHO05D001937 5.5e-07 58.2 51 56.9
Lj1A1030T42 Lonicera japonica HOM05D000605 ORTHO05D001937 5.5e-07 58.2 51 52.9
LjContig00155g0002133 Lotus japonicus HOM05D000605 ORTHO05D001937 5.5e-07 58.2 51 51.0
CANSAT21G0315 Cannabis sativa HOM05D000605 ORTHO05D001937 7.2e-07 57.8 51 49.0
vmacro06857 Vaccinium macrocarpon HOM05D000605 ORTHO05D001937 7.2e-07 57.8 51 52.9
Aqoxy5G04390 Aquilegia oxysepala HOM05D000605 ORTHO05D001937 9.4e-07 57.4 51 54.9
Nn5g29358 Nelumbo nucifera HOM05D000605 ORTHO05D001937 9.4e-07 57.4 51 47.1
FvH4_7g33281 Fragaria vesca HOM05D000605 ORTHO05D001937 1.2e-06 57.0 51 56.9
Gohir.D02G010500 Gossypium hirsutum HOM05D000605 ORTHO05D001937 1.2e-06 57.0 77 42.9
Nn2g13271 Nelumbo nucifera HOM05D000605 ORTHO05D001937 1.2e-06 57.0 51 51.0
CAN.G303.53 Capsicum annuum HOM05D000605 ORTHO05D001937 1.6e-06 56.6 51 52.9
FAN03G0238 Fragaria x ananassa HOM05D000605 ORTHO05D001937 2.1e-06 56.2 51 54.9
Gohir.A02G010200 Gossypium hirsutum HOM05D000605 ORTHO05D001937 2.1e-06 56.2 51 51.0
Gorai.005G012800 Gossypium raimondii HOM05D000605 ORTHO05D001937 2.1e-06 56.2 51 51.0
RcHm_v2.0_Chr1g0383261 Rosa chinensis HOM05D000605 ORTHO05D001937 2.7e-06 55.8 51 54.9
MELO3C009643.2 Cucumis melo HOM05D000605 ORTHO05D001937 3.6e-06 55.5 51 51.0
Rhsim09G0210900 Rhododendron simsii HOM05D000605 ORTHO05D001937 3.6e-06 55.5 51 49.0
PGSC0003DMG400000550 Solanum tuberosum HOM05D000605 ORTHO05D001937 3.6e-06 55.5 51 54.9
Duzib212G0246 Durio zibethinus HOM05D000605 ORTHO05D001937 4.7e-06 55.1 51 47.1
ECA246G1865 Erigeron canadensis HOM05D000605 ORTHO05D001937 4.7e-06 55.1 51 51.0
Hund21078 Selenicereus undatus HOM05D000605 ORTHO05D001937 4.7e-06 55.1 51 51.0
arahy.Tifrunner.gnm1.ann1.VFF8LW Arachis hypogaea HOM05D000605 ORTHO05D001937 6.1e-06 54.7 51 51.0
HanXRQChr10g0295761 Helianthus annuus HOM05D000605 ORTHO05D001937 6.1e-06 54.7 51 49.0
ATR0665G550 Amborella trichopoda HOM05D000605 ORTHO05D001937 7.9e-06 54.3 51 51.0
CDE04G1489 Ceratophyllum demersum HOM05D004720 ORTHO05D005359 7.9e-06 54.3 51 51.0
Peaxi162Scf01026g00267 Petunia axillaris HOM05D000605 ORTHO05D001937 7.9e-06 54.3 51 51.0
RcHm_v2.0_Chr1g0334581 Rosa chinensis HOM05D000605 ORTHO05D001937 7.9e-06 54.3 51 52.9
SEGI_30760 Sequoiadendron giganteum HOM05D000605 ORTHO05D001937 7.9e-06 54.3 51 49.0


User provided reference genes

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