Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p005902 Quercus lobata HOM05D006461 ORTHO05D008199 2.2e-94 349.0 178 100.0
CiPaw.05G210400 Carya illinoinensis HOM05D006461 ORTHO05D008199 5.1e-67 258.1 178 77.0
Cfa016120 Carpinus fangiana HOM05D006461 ORTHO05D008199 1.4e-64 250.0 179 77.1
CiPaw.06G037900 Carya illinoinensis HOM05D006461 ORTHO05D008199 8.7e-59 230.7 179 70.9
Haze_00341 Corylus avellana HOM05D006461 ORTHO05D000508 6.0e-52 208.0 228 56.1
Atru.chr2.1733 Acer truncatum HOM05D006461 ORTHO05D008199 2.8e-49 199.1 180 62.8
Ciclev10032825m.g Citrus clementina HOM05D006461 ORTHO05D008199 1.7e-46 189.9 180 62.2
TAR375G0815 Trochodendron aralioides HOM05D006461 ORTHO05D008199 2.2e-46 189.5 181 62.4
Manes.08G158500 Manihot esculenta HOM05D006461 ORTHO05D008199 9.3e-45 184.1 193 58.0
Nn3g19117 Nelumbo nucifera HOM05D006461 ORTHO05D008199 1.8e-43 179.9 181 60.2
Prupe.1G398900 Prunus persica HOM05D006461 ORTHO05D008199 4.3e-42 175.3 181 61.3
arahy.Tifrunner.gnm1.ann1.8SK5FU Arachis hypogaea HOM05D006461 ORTHO05D008199 4.8e-41 171.8 171 60.2
arahy.Tifrunner.gnm1.ann1.W7YZT9 Arachis hypogaea HOM05D006461 ORTHO05D008199 1.1e-40 170.6 179 58.7
CARHR195620 Cardamine hirsuta HOM05D006461 ORTHO05D008199 1.4e-40 170.2 178 56.7
Thhalv10014786m.g Eutrema salsugineum HOM05D006461 ORTHO05D008199 1.4e-40 170.2 184 56.0
TWI32G0808 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 1.4e-40 170.2 177 55.9
Thecc.05G228900 Theobroma cacao HOM05D006461 ORTHO05D008199 4.0e-40 168.7 190 54.7
Carub.0006s1580 Capsella rubella HOM05D006461 ORTHO05D008199 6.9e-40 167.9 180 55.6
Potri.013G074100 Populus trichocarpa HOM05D006461 ORTHO05D008199 1.2e-39 167.2 107 81.3
Duzib106G1824 Durio zibethinus HOM05D006461 ORTHO05D008199 1.5e-39 166.8 186 55.9
AL6G28650 Arabidopsis lyrata HOM05D006461 ORTHO05D008199 2.0e-39 166.4 178 56.7
DCAR_020437 Daucus carota HOM05D006461 ORTHO05D008199 2.6e-39 166.0 163 61.3
Ca_26296_v3 Cicer arietinum L. HOM05D006461 ORTHO05D008199 3.4e-39 165.6 181 55.8
Glyma.02G000900 Glycine max HOM05D006461 ORTHO05D008199 3.4e-39 165.6 164 59.1
Hma1.2p1_0074F.1_g039100 Hydrangea macrophylla HOM05D006461 ORTHO05D008199 3.4e-39 165.6 177 58.8
A03p08420 Brassica napus HOM05D006461 ORTHO05D008199 4.5e-39 165.2 186 54.3
BraA03t10165Z Brassica rapa HOM05D006461 ORTHO05D008199 4.5e-39 165.2 186 54.3
Manes.09G131300 Manihot esculenta HOM05D006461 ORTHO05D008199 4.5e-39 165.2 191 55.0
BcaB01g05208 Brassica carinata HOM05D006461 ORTHO05D008199 7.6e-39 164.5 186 55.4
C03p09820 Brassica napus HOM05D006461 ORTHO05D008199 7.6e-39 164.5 186 55.4
BolC3t13470H Brassica oleracea HOM05D006461 ORTHO05D008199 7.6e-39 164.5 186 55.4
CsaV3_5G005660 Cucumis sativus L. HOM05D006461 ORTHO05D008199 1.0e-38 164.1 146 65.1
Lj6g0024347 Lotus japonicus HOM05D006461 ORTHO05D008199 1.0e-38 164.1 97 81.4
RcHm_v2.0_Chr4g0406641 Rosa chinensis HOM05D006461 ORTHO05D008199 1.7e-38 163.3 181 54.7
Sp6g26660 Schrenkiella parvula HOM05D006461 ORTHO05D008199 1.7e-38 163.3 183 53.6
Sed0021956 Sechium edule HOM05D006461 ORTHO05D008199 1.7e-38 163.3 99 81.8
TPR.G30220 Trifolium pratense HOM05D006461 ORTHO05D008199 1.7e-38 163.3 164 58.5
Phvul.007G281100 Phaseolus vulgaris HOM05D006461 ORTHO05D008199 2.2e-38 162.9 171 57.9
BcaB01g04940 Brassica carinata HOM05D006461 ORTHO05D008199 2.9e-38 162.5 181 53.0
ClCG01G005420 Citrullus lanatus HOM05D006461 ORTHO05D008199 2.9e-38 162.5 101 79.2
MD08G1049500 Malus domestica HOM05D006461 ORTHO05D008199 3.8e-38 162.2 180 53.9
Medtr1g040145 Medicago truncatula HOM05D006461 ORTHO05D008199 3.8e-38 162.2 172 53.5
THA.LOC104802902 Tarenaya hassleriana HOM05D006461 ORTHO05D008199 3.8e-38 162.2 188 53.7
MELO3C005387.2 Cucumis melo HOM05D006461 ORTHO05D008199 4.9e-38 161.8 131 67.2
Dinv19309 Davidia involucrata HOM05D006461 ORTHO05D008199 4.9e-38 161.8 180 60.0
Rhsim03G0225700 Rhododendron simsii HOM05D006461 ORTHO05D008199 6.5e-38 161.4 103 82.5
C09p59590 Brassica napus HOM05D006461 ORTHO05D008199 8.4e-38 161.0 174 54.0
CDE12G0687 Ceratophyllum demersum HOM05D006461 ORTHO05D008199 8.4e-38 161.0 172 53.5
MD15G1045100 Malus domestica HOM05D006461 ORTHO05D008199 8.4e-38 161.0 177 55.4
BcaB08g36762 Brassica carinata HOM05D006461 ORTHO05D008199 1.9e-37 159.8 177 53.7
PSO063G2738 Papaver somniferum HOM05D006461 ORTHO05D008199 1.9e-37 159.8 177 55.9
VMungo0720G0947 Vigna mungo HOM05D006461 ORTHO05D008199 1.9e-37 159.8 175 57.1
BolC9t58798H Brassica oleracea HOM05D006461 ORTHO05D008199 2.5e-37 159.5 174 54.0
FvH4_4g10840 Fragaria vesca HOM05D006461 ORTHO05D008199 2.5e-37 159.5 177 55.4
FAN17G2347 Fragaria x ananassa HOM05D006461 ORTHO05D008199 2.5e-37 159.5 174 56.3
Aa31LG11G12100 Aethionema arabicum HOM05D006461 ORTHO05D008199 3.2e-37 159.1 183 53.6
CANSAT54G2891 Cannabis sativa HOM05D006461 ORTHO05D008199 4.2e-37 158.7 187 52.4
Gohir.D13G163800 Gossypium hirsutum HOM05D006461 ORTHO05D008199 4.2e-37 158.7 100 79.0
Nitab4.5_0000021g0870 Nicotiana tabacum HOM05D006461 ORTHO05D008199 4.2e-37 158.7 99 83.8
Actinidia08786 Actinidia chinensis HOM05D006461 ORTHO05D008199 5.5e-37 158.3 93 84.9
Gohir.A13G158700 Gossypium hirsutum HOM05D006461 ORTHO05D008199 5.5e-37 158.3 100 78.0
Psat6g101920 Pisum sativum HOM05D006461 ORTHO05D008199 5.5e-37 158.3 105 75.2
Gorai.013G199400 Gossypium raimondii HOM05D006461 ORTHO05D008199 7.1e-37 157.9 100 79.0
Nitab4.5_0005545g0020 Nicotiana tabacum HOM05D006461 ORTHO05D008199 7.1e-37 157.9 99 82.8
BcaC04g18779 Brassica carinata HOM05D006461 ORTHO05D008199 9.3e-37 157.5 178 51.1
A10p21840 Brassica napus HOM05D006461 ORTHO05D008199 9.3e-37 157.5 188 53.7
FAN12G0004 Fragaria x ananassa HOM05D006461 ORTHO05D008199 9.3e-37 157.5 174 55.7
Cc11_g04930 Coffea canephora HOM05D006461 ORTHO05D008199 2.1e-36 156.4 115 72.2
Sopen03g028120 Solanum pennellii HOM05D006461 ORTHO05D008199 2.7e-36 156.0 109 73.4
Solyc03g097360.3 Solanum lycopersicum HOM05D006461 ORTHO05D008199 4.6e-36 155.2 111 72.1
PGSC0003DMG400026478 Solanum tuberosum HOM05D006461 ORTHO05D008199 4.6e-36 155.2 179 54.2
Cc02_g00020 Coffea canephora HOM05D006461 ORTHO05D008199 6.0e-36 154.8 157 58.0
PGR119G0757 Punica granatum HOM05D006461 ORTHO05D008199 6.0e-36 154.8 133 63.9
Aqoxy3G01574 Aquilegia oxysepala HOM05D006461 ORTHO05D008199 1.3e-35 153.7 98 79.6
CAN.G732.29 Capsicum annuum HOM05D006461 ORTHO05D008199 1.3e-35 153.7 103 79.6
Peaxi162Scf00516g00428 Petunia axillaris HOM05D006461 ORTHO05D008199 1.8e-35 153.3 99 78.8
BraA10t44244Z Brassica rapa HOM05D006461 ORTHO05D008199 3.0e-35 152.5 172 51.7
TWI60G1716 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 5.1e-35 151.8 181 53.6
Ah.08g222190 Amaranthus hybridus HOM05D006461 ORTHO05D008199 6.7e-35 151.4 105 74.3
Sc03g0004610 Simmondsia chinensis HOM05D006461 ORTHO05D008199 1.9e-34 149.8 98 79.6
AUR62001576 Chenopodium quinoa HOM05D006461 ORTHO05D008199 3.3e-34 149.1 107 74.8
Lsat_1_v5_gn_9_48000 Lactuca sativa HOM05D006461 ORTHO05D008199 9.7e-34 147.5 104 74.0
EL10Ac7g16271 Beta vulgaris HOM05D006461 ORTHO05D008199 1.3e-33 147.1 89 82.0
Migut.F00927 Erythranthe guttata HOM05D006461 ORTHO05D008199 1.3e-33 147.1 100 75.0
SGA_v2.0_scaffold51G18860 Striga asiatica HOM05D006461 ORTHO05D008199 1.3e-33 147.1 174 52.9
AUR62020207 Chenopodium quinoa HOM05D006461 ORTHO05D008199 3.7e-33 145.6 185 49.7
Hund20961 Selenicereus undatus HOM05D006461 ORTHO05D008199 3.7e-33 145.6 92 79.3
ECA232G1267 Erigeron canadensis HOM05D006461 ORTHO05D008199 4.8e-33 145.2 107 69.2
unitig_62.g23822 Utricularia gibba HOM05D006461 ORTHO05D008199 4.8e-33 145.2 99 76.8
SalBow2G0694 Salvia bowleyana HOM05D006461 ORTHO05D008199 8.2e-33 144.4 100 75.0
SEGI_06006 Sequoiadendron giganteum HOM05D006461 ORTHO05D008199 8.2e-33 144.4 95 72.6
MSTRG.8560 Avicennia marina HOM05D006461 ORTHO05D008199 1.1e-32 144.1 104 70.2
Sabra13G0064300 Salix brachista HOM05D006461 ORTHO05D008199 1.4e-32 143.7 130 63.1
GSVIVG01024255001 Vitis vinifera HOM05D006461 ORTHO05D008199 3.1e-32 142.5 80 88.8
HanXRQChr05g0140271 Helianthus annuus HOM05D006461 ORTHO05D008199 6.9e-32 141.4 101 74.3
Mapoly0098s0024 Marchantia polymorpha HOM05D006461 ORTHO05D008199 6.9e-32 141.4 97 72.2
Lj7P538T25 Lonicera japonica HOM05D006461 ORTHO05D008199 1.9e-29 133.3 77 87.0
Os06g0484600 Oryza sativa ssp. japonica HOM05D006461 ORTHO05D008199 2.5e-29 132.9 100 67.0
SMO358G0572 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 5.5e-29 131.7 98 66.3
Zm00001eb278180 Zea mays HOM05D006461 ORTHO05D008199 1.0e-27 127.5 100 67.0
Pp3c1_12810 Physcomitrium patens HOM05D006461 ORTHO05D008199 2.3e-27 126.3 86 72.1
HPP92_003741 Vanilla planifolia HOM05D001207 ORTHO05D007056 2.3e-27 126.3 74 83.8
Actinidia24631 Actinidia chinensis HOM05D006461 ORTHO05D008199 5.1e-27 125.2 72 86.1
AagrBONN_evm.TU.Sc2ySwM_117.1385 Anthoceros agrestis HOM05D006461 ORTHO05D008199 7.4e-26 121.3 100 59.0
Hund18806 Selenicereus undatus HOM05D006461 ORTHO05D008199 4.8e-25 118.6 88 67.0
Sed0001670 Sechium edule HOM05D006461 ORTHO05D008199 3.1e-24 115.9 136 54.4
Cre09.g394701 Chlamydomonas reinhardtii HOM05D006461 ORTHO05D008199 1.3e-22 110.5 101 56.4
PRCOL_00004611 Prasinoderma coloniale HOM05D006461 ORTHO05D008199 3.6e-20 102.4 88 56.8
CSS0025765 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 2.0e-18 96.7 188 37.2
CSS0040075 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 2.0e-18 96.7 188 37.2
SMO358G0215 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 1.8e-16 90.1 79 49.4
MCO16G354 Micromonas commoda HOM05D006461 ORTHO05D008199 6.9e-16 88.2 103 50.5
Cpa.g.sc2589.1 Carica papaya HOM05D006461 ORTHO05D008199 2.0e-15 86.7 134 43.3
Eucgr.A02995 Eucalyptus grandis HOM05D006461 ORTHO05D008199 2.6e-15 86.3 50 82.0
AT5G17560 Arabidopsis thaliana HOM05D006461 ORTHO05D008199 4.5e-15 85.5 134 44.8
Lalb_Chr19g0127781 Lupinus albus HOM05D006461 ORTHO05D008199 4.5e-15 85.5 48 87.5
Actinidia28897 Actinidia chinensis HOM05D006461 ORTHO05D008199 2.5e-13 79.7 131 42.7
SHI39095 Sapria himalayana HOM05D006461 ORTHO05D008199 4.2e-13 79.0 128 44.5
Mapoly0051s0029 Marchantia polymorpha HOM05D002854 ORTHO05D003051 6.5e-06 55.1 95 37.9


User provided reference genes

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