Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 6.9e-218 760.4 393 100.0
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 2.3e-160 569.3 340 84.1
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 1.5e-159 566.6 351 80.6
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 5.6e-159 564.7 351 80.6
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 1.8e-157 559.7 351 80.1
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 1.1e-154 550.4 347 79.3
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 1.4e-154 550.1 349 78.8
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 4.1e-154 548.5 342 80.4
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 5.4e-154 548.1 349 77.1
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 5.4e-154 548.1 352 76.1
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 2.1e-153 546.2 339 79.6
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 2.1e-153 546.2 345 81.2
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 3.5e-153 545.4 340 79.1
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 6.0e-153 544.7 351 77.2
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 1.0e-152 543.9 349 75.4
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 2.3e-152 542.7 344 78.2
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 2.3e-152 542.7 353 77.6
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 2.3e-152 542.7 350 78.6
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 3.0e-152 542.3 346 80.1
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 5.1e-152 541.6 344 78.8
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 6.6e-152 541.2 346 79.2
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 1.1e-151 540.4 352 77.0
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 5.6e-151 538.1 352 77.0
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 5.6e-151 538.1 351 76.6
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 9.6e-151 537.3 351 76.6
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 1.2e-150 537.0 344 77.3
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 1.2e-150 537.0 351 76.1
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 2.1e-150 536.2 346 78.6
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 2.1e-150 536.2 341 78.3
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 4.7e-150 535.0 346 78.3
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 4.7e-150 535.0 346 76.6
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 1.4e-149 533.5 350 76.0
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 2.4e-149 532.7 379 72.8
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 5.2e-149 531.6 351 74.1
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 5.2e-149 531.6 344 77.3
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 6.9e-149 531.2 350 77.1
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 1.5e-148 530.0 348 76.1
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 1.5e-148 530.0 340 76.8
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 1.5e-148 530.0 347 77.8
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 1.5e-148 530.0 350 74.3
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 2.0e-148 529.6 360 75.3
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 2.0e-148 529.6 351 73.2
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 2.0e-148 529.6 351 74.1
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 4.4e-148 528.5 351 73.5
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 7.6e-148 527.7 359 77.2
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 1.3e-147 526.9 316 79.4
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 1.3e-147 526.9 309 82.8
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 1.3e-147 526.9 349 74.2
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 6.4e-147 524.6 346 75.1
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 1.4e-146 523.5 316 79.4
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 2.4e-146 522.7 354 72.9
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 3.2e-146 522.3 348 74.7
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 3.2e-146 522.3 311 82.0
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 5.4e-146 521.5 351 74.4
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 5.4e-146 521.5 340 74.1
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 1.2e-145 520.4 364 73.6
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 1.2e-145 520.4 349 73.6
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 2.1e-145 519.6 352 73.6
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 2.7e-145 519.2 353 74.8
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 4.6e-145 518.5 338 76.0
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 6.0e-145 518.1 348 73.9
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 6.0e-145 518.1 344 74.4
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 7.8e-145 517.7 348 74.1
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 7.8e-145 517.7 348 74.1
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 7.8e-145 517.7 327 76.5
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 2.3e-144 516.2 346 72.8
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 3.0e-144 515.8 348 73.9
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 8.7e-144 514.2 340 75.6
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 1.5e-143 513.5 348 73.6
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 3.3e-143 512.3 348 73.6
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 1.6e-142 510.0 350 73.4
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 6.2e-142 508.1 403 65.0
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 5.8e-140 501.5 346 74.6
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 3.2e-138 495.7 377 69.2
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 1.2e-137 493.8 311 76.5
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 7.9e-137 491.1 343 68.5
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 2.5e-135 486.1 338 71.9
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 7.4e-135 484.6 353 70.8
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 7.4e-135 484.6 341 69.2
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 9.6e-135 484.2 320 72.8
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 4.8e-134 481.9 351 70.7
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 4.8e-134 481.9 343 67.6
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 1.6e-126 456.8 263 84.4
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 2.0e-124 449.9 317 67.2
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 6.5e-123 444.9 341 63.9
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 3.9e-120 435.6 351 65.8
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 2.5e-119 433.0 322 63.7
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 1.0e-115 421.0 253 81.0
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 1.9e-114 416.8 374 60.2
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 3.6e-113 412.5 303 65.0
Duzib268G1319 Durio zibethinus HOM05D006459 ORTHO05D008414 4.6e-113 412.1 342 64.9
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 2.3e-112 409.8 351 62.7
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 1.1e-111 407.5 315 67.9
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 1.6e-110 403.7 229 85.6
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 2.6e-108 396.4 527 46.7
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 2.7e-105 386.3 364 59.6
Sc25g0003010 Simmondsia chinensis HOM05D006459 ORTHO05D008414 8.8e-104 381.3 222 82.4
Nn5g27277 Nelumbo nucifera HOM05D006459 ORTHO05D008414 1.2e-97 360.9 254 72.8
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 1.3e-86 324.3 193 79.8
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 3.2e-82 309.7 314 54.8
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 1.5e-74 284.3 166 78.9
vmacro16046 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 9.5e-74 281.6 177 79.1
CBR_g45928 Chara braunii HOM05D006459 ORTHO05D008414 2.2e-70 270.4 217 59.0
Cre12.g521250 Chlamydomonas reinhardtii HOM05D006459 ORTHO05D008414 4.1e-69 266.2 423 38.1
Haze_26337 Corylus avellana HOM05D006459 ORTHO05D008414 1.8e-64 250.8 327 44.3
HPP92_005619 Vanilla planifolia HOM05D006459 ORTHO05D008414 1.5e-55 221.1 123 81.3
Glyma.01G230800 Glycine max HOM05D006459 ORTHO05D008414 9.8e-55 218.4 127 82.7
MCO04G089 Micromonas commoda HOM05D006459 ORTHO05D008414 7.3e-50 202.2 326 39.3
PRCOL_00002994 Prasinoderma coloniale HOM05D006459 ORTHO05D008414 8.9e-48 195.3 345 36.2
SEGI_15073 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 7.8e-44 182.2 126 69.8
HPP92_005618 Vanilla planifolia HOM05D006459 ORTHO05D008414 8.9e-40 168.7 97 82.5
vmacro16045 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 9.2e-37 158.7 88 86.4
SMO272G0012 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 3.6e-33 146.7 95 68.4
CBR_g27970 Chara braunii HOM05D006459 ORTHO05D008414 3.6e-25 120.2 86 65.1
FAN08G1548 Fragaria x ananassa HOM05D006459 ORTHO05D008414 2.4e-21 107.5 65 78.5
SEGI_06082 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 4.3e-18 96.7 76 61.8
Nn179s44626 Nelumbo nucifera HOM05D006459 ORTHO05D008414 9.6e-18 95.5 56 89.3
SEGI_00088 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 2.5e-10 70.9 38 73.7
MELO3C033538.2 Cucumis melo HOM05D006459 ORTHO05D169875 6.2e-09 66.2 163 31.9
QL03p030354 Quercus lobata HOM05D006459 ORTHO05D338169 1.0e-06 58.9 47 68.1
Lsat_1_v5_gn_2_49420 Lactuca sativa HOM05D006459 ORTHO05D008414 3.8e-06 57.0 30 86.7


User provided reference genes

Program Settings